Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 4.1e-173 611.3 313 100.0
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 6.4e-166 587.4 303 98.7
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 5.6e-162 574.3 303 96.4
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 1.3e-158 563.1 303 94.4
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 5.0e-134 481.5 284 86.6
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 1.6e-132 476.5 304 78.3
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 7.9e-132 474.2 304 77.6
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 1.5e-127 459.9 312 73.4
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 3.4e-127 458.8 302 74.2
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.7e-126 456.4 305 72.5
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 8.5e-126 454.1 304 73.7
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.1e-125 453.8 305 72.5
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 4.2e-125 451.8 306 73.5
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 3.6e-124 448.7 304 72.4
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 6.1e-124 448.0 303 71.3
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 1.4e-123 446.8 311 70.4
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 2.3e-123 446.0 303 71.3
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 6.7e-123 444.5 303 71.6
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 2.6e-122 442.6 304 71.1
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 9.7e-122 440.7 303 71.3
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 2.2e-121 439.5 304 70.7
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 6.3e-121 438.0 310 69.4
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 6.3e-121 438.0 307 71.0
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 6.3e-121 438.0 308 70.5
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 8.2e-121 437.6 304 71.7
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 1.4e-120 436.8 304 72.0
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.8e-120 436.4 302 71.2
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.8e-120 436.4 305 69.8
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 2.4e-120 436.0 304 69.1
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.1e-120 435.3 305 69.5
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 4.1e-120 435.3 304 70.7
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 5.3e-120 434.9 304 71.1
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 7.0e-120 434.5 301 68.8
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 9.1e-120 434.1 304 70.4
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 2.0e-119 433.0 303 69.3
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 2.6e-119 432.6 302 68.2
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 2.6e-119 432.6 304 71.1
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 3.4e-119 432.2 302 68.2
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 3.4e-119 432.2 304 70.4
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 4.5e-119 431.8 305 69.5
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 5.9e-119 431.4 303 69.0
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 7.7e-119 431.0 304 69.1
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.0e-118 430.6 304 69.4
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 1.0e-118 430.6 303 69.6
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 1.3e-118 430.3 303 68.6
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 1.3e-118 430.3 303 69.3
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 1.3e-118 430.3 303 69.3
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 1.7e-118 429.9 301 68.4
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.7e-118 429.9 306 69.3
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.7e-118 429.9 302 67.9
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 8.5e-118 427.6 304 68.1
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 1.1e-117 427.2 303 69.0
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 1.4e-117 426.8 233 90.6
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 1.4e-117 426.8 307 68.4
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 1.9e-117 426.4 303 68.0
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 2.5e-117 426.0 302 68.9
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 2.5e-117 426.0 304 70.1
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 5.5e-117 424.9 305 69.2
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 5.5e-117 424.9 303 68.3
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 7.2e-117 424.5 304 67.4
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 7.2e-117 424.5 303 68.0
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 7.2e-117 424.5 301 67.4
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 9.4e-117 424.1 303 66.0
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 2.7e-116 422.5 309 67.6
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 3.6e-116 422.2 305 67.9
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 4.7e-116 421.8 304 68.1
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 2.0e-114 416.4 304 67.1
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.3e-113 413.7 302 70.5
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 6.3e-113 411.4 304 67.1
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 7.0e-112 407.9 304 67.1
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 1.6e-111 406.8 347 60.8
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.6e-111 406.0 283 70.7
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 5.9e-111 404.8 269 72.9
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 3.8e-110 402.1 304 68.1
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 9.4e-109 397.5 304 64.1
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 8.0e-108 394.4 305 65.9
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 8.8e-107 391.0 298 64.8
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 1.3e-105 387.1 303 65.3
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 1.3e-105 387.1 304 63.5
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 1.7e-105 386.7 324 61.4
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.8e-104 383.3 213 87.8
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 1.5e-101 373.6 304 63.8
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 5.5e-101 371.7 304 63.8
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 9.8e-98 360.9 305 60.3
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 1.2e-95 354.0 325 58.8
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 5.9e-95 351.7 273 67.0
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 5.9e-95 351.7 273 67.0
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 1.7e-94 350.1 255 68.2
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 1.3e-89 334.0 240 69.6
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 5.9e-87 325.1 261 63.6
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 6.6e-86 321.6 304 50.7
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 2.3e-83 313.2 297 51.9
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 9.8e-82 307.8 238 62.2
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 1.6e-76 290.4 290 46.6
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 4.4e-74 282.3 285 46.3
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 9.8e-74 281.2 220 60.9
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 3.0e-70 269.6 305 46.6
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 3.3e-69 266.2 311 41.2
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 1.5e-66 257.3 181 66.3
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 9.9e-66 254.6 268 48.9
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 5.4e-64 248.8 167 71.3
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.1e-61 241.1 238 51.7
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 4.4e-58 229.2 318 44.0
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 4.2e-56 222.6 319 40.1
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 1.2e-52 211.1 147 68.0
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 8.1e-44 181.8 142 62.7
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 5.8e-42 175.6 129 65.9
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.6e-36 157.5 216 43.5
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 7.9e-31 138.7 103 65.0
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 1.0e-25 121.7 70 88.6
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 4.2e-24 116.3 88 65.9
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 2.1e-23 114.0 233 32.6
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 4.6e-23 112.8 93 60.2
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 1.8e-19 100.9 179 35.2
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.7e-09 67.8 72 48.6
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 7.2e-08 62.4 43 69.8


User provided reference genes

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