Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g006714.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.3e-61 238.0 109 100.0
Solyc12g098823.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.8e-52 208.4 109 88.1
Solyc01g008473.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.2e-52 206.8 109 88.1
Solyc05g004003.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 9.1e-51 203.4 109 87.2
Solyc01g150104.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.2e-50 203.0 109 84.4
Solyc01g150105.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.9e-50 200.7 109 85.3
Solyc12g098827.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.9e-50 200.7 109 83.5
Solyc01g009305.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.2e-47 193.0 107 84.1
Solyc00g500379.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.6e-47 192.6 109 82.6
Solyc01g008477.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.7e-47 191.8 109 80.7
Solyc09g009587.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.7e-47 191.8 108 84.3
Solyc09g098604.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.7e-47 191.0 109 82.6
Solyc10g150100.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.7e-47 191.0 107 83.2
Solyc05g021415.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 6.1e-47 190.7 109 82.6
Solyc01g150107.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.0e-46 189.9 136 69.9
Solyc08g069236.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.4e-46 189.5 108 82.4
Solyc12g150128.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.4e-46 189.5 101 87.1
Sopen00g009060 Solanum pennellii HOM05D005671 ORTHO05D004497 5.2e-46 187.6 109 82.6
Solyc06g004005.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.0e-45 185.7 108 81.5
Solyc03g006907.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.6e-45 185.3 142 65.5
Solyc05g021405.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.3e-44 183.0 107 79.4
Solyc09g098603.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.8e-43 179.1 99 82.8
Solyc11g004005.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 9.1e-43 176.8 108 77.8
Solyc01g004008.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.2e-42 176.4 97 85.6
Solyc10g086783.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.7e-41 172.6 99 80.8
Solyc05g053133.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.2e-41 172.2 100 81.0
Solyc03g005393.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.9e-41 171.8 150 59.3
Solyc00g500377.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.8e-41 171.4 88 88.6
Solyc00g500387.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.5e-41 170.2 108 73.1
Solyc01g008479.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.2e-39 166.4 107 75.7
Solyc08g007715.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 6.1e-39 164.1 86 84.9
Solyc09g005135.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.0e-39 163.7 148 57.4
Sopen04g036640 Solanum pennellii HOM05D005671 ORTHO05D004497 8.8e-38 160.2 93 77.4
Solyc12g150102.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.6e-37 158.7 139 58.3
Solyc05g006605.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.3e-37 158.3 83 85.5
Solyc09g009173.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.8e-36 155.2 83 83.1
Solyc03g006718.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.7e-36 154.8 109 72.5
Solyc01g004006.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.8e-36 154.5 86 84.9
Solyc03g006712.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.4e-35 152.1 84 81.0
Solyc00g500283.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.1e-35 151.8 101 73.3
Solyc04g011333.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.1e-35 151.8 83 83.1
Solyc00g500269.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.0e-34 149.1 109 67.0
Solyc04g075018.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.0e-34 149.1 168 49.4
Solyc04g150100.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.5e-34 147.9 94 75.5
Solyc04g064958.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.2e-33 145.6 105 71.4
Solyc03g004007.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.5e-32 141.0 114 61.4
Sopen09g030900 Solanum pennellii HOM05D005671 ORTHO05D004497 5.5e-32 141.0 93 74.2
Solyc10g080782.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.6e-31 139.4 77 83.1
Solyc03g061653.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.0e-31 137.1 83 77.1
Sopen00g007500 Solanum pennellii HOM05D005671 ORTHO05D004497 3.0e-30 135.2 83 77.1
Solyc08g004005.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 6.8e-30 134.0 99 64.6
Solyc01g004002.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.0e-29 132.5 87 73.6
Sopen07g014500 Solanum pennellii HOM05D005671 ORTHO05D004497 2.0e-29 132.5 93 67.7
Sopen12g005340 Solanum pennellii HOM05D005671 ORTHO05D004497 2.0e-29 132.5 83 75.9
Solyc01g008475.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.6e-29 132.1 76 80.3
Solyc08g004000.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.4e-29 131.7 66 89.4
Solyc12g150100.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.4e-29 131.7 83 74.7
Solyc05g004007.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.5e-29 130.6 72 81.9
Solyc04g075014.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.3e-28 129.8 92 64.1
Sopen00g013100 Solanum pennellii HOM05D005671 ORTHO05D004497 2.8e-28 128.6 69 84.1
Solyc04g004000.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.8e-27 125.9 67 88.1
Solyc06g150122.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.1e-27 125.2 76 77.6
Solyc03g006715.2 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.7e-25 119.4 64 84.4
Solyc11g073315.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.8e-25 118.2 62 85.5
Sopen00g012970 Solanum pennellii HOM05D005671 ORTHO05D004497 6.5e-25 117.5 82 67.1
Sopen00g011410 Solanum pennellii HOM05D005671 ORTHO05D004497 3.3e-24 115.2 64 79.7
Solyc02g014876.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 9.5e-24 113.6 119 52.9
Solyc00g500270.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.8e-23 112.1 60 83.3
Solyc03g026418.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.8e-22 109.4 88 62.5
Solyc07g007335.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.8e-22 109.4 83 63.9
Solyc08g069238.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.0e-22 108.6 60 81.7
Sopen00g010810 Solanum pennellii HOM05D005671 ORTHO05D004497 5.2e-22 107.8 60 80.0
Solyc08g069237.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.2e-21 106.7 69 73.9
Solyc03g006716.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.0e-21 105.9 60 80.0
Sopen07g026870 Solanum pennellii HOM05D000061 ORTHO05D000050 2.0e-21 105.9 71 71.8
Sopen00g012730 Solanum pennellii HOM05D005671 ORTHO05D004497 1.3e-20 103.2 60 75.0
Solyc07g049805.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.7e-20 102.8 59 79.7
Solyc00g500386.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.2e-20 102.4 67 73.1
Solyc12g100363.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.2e-20 102.4 60 76.7
Solyc00g500235.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.8e-20 102.1 60 75.0
Sopen11g001010 Solanum pennellii HOM05D005671 ORTHO05D004497 1.4e-19 99.8 58 77.6
Solyc03g006365.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.8e-19 99.4 79 63.3
Sopen10g036190 Solanum pennellii HOM05D005671 ORTHO05D004497 1.8e-19 99.4 60 75.0
Solyc09g009734.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.0e-19 97.4 54 77.8
Solyc09g004000.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.2e-18 96.7 82 57.3
Solyc01g150106.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.0e-18 95.9 79 59.5
Solyc03g124061.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.0e-18 95.9 124 46.0
Sopen00g011000 Solanum pennellii HOM05D005671 ORTHO05D004497 2.0e-18 95.9 87 58.6
Solyc03g061657.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.8e-18 94.0 76 63.2
Solyc06g004000.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.0e-17 93.6 109 48.6
Solyc02g014871.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.7e-17 92.8 152 37.5
Sopen06g020570 Solanum pennellii HOM05D005671 ORTHO05D004497 1.7e-17 92.8 87 55.2
Solyc03g005395.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.0e-17 91.3 47 85.1
Solyc10g086785.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.0e-17 91.3 57 78.9
Solyc08g006257.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 5.6e-16 87.8 67 59.7
Sopen00g002980 Solanum pennellii HOM05D005671 ORTHO05D004497 5.6e-16 87.8 77 61.0
Solyc08g006255.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.3e-16 87.4 47 80.9
Sopen00g011750 Solanum pennellii HOM05D005671 ORTHO05D004497 9.5e-16 87.0 46 80.4
Solyc01g004000.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.8e-15 85.5 68 67.6
Sopen00g012720 Solanum pennellii HOM05D005671 ORTHO05D004497 8.0e-15 84.0 85 52.9
Solyc00g500385.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.0e-14 81.6 49 79.6
Solyc00g500356.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.5e-13 79.7 119 42.9
Solyc04g075012.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 6.4e-12 74.3 94 45.7
Solyc00g500246.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.6e-10 68.2 84 45.2
Solyc09g076053.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.3e-09 66.6 65 55.4
Solyc09g098606.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 2.3e-09 65.9 35 82.9
Solyc12g150129.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.9e-09 65.1 38 73.7
Solyc04g064956.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 5.0e-09 64.7 45 71.1
Solyc10g086787.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 1.5e-08 63.2 36 77.8
Solyc09g098605.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.3e-08 61.6 35 74.3
Solyc00g500366.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 7.3e-08 60.8 52 55.8
Solyc00g500122.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.6e-07 58.5 72 45.8
Solyc04g004005.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 3.6e-07 58.5 90 42.2
Solyc00g500367.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 6.2e-07 57.8 35 74.3
Solyc11g004000.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 8.0e-07 57.4 30 90.0
PGSC0003DMG400012108 Solanum tuberosum HOM05D005671 ORTHO05D004497 2.3e-06 55.8 51 52.9
Solyc00g500120.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.0e-06 55.1 35 68.6
Solyc09g098607.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.0e-06 55.1 35 68.6
Solyc09g098608.1 Solanum lycopersicum HOM05D005671 ORTHO05D004497 4.0e-06 55.1 35 68.6


User provided reference genes

Program Settings