Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 7.3e-43 176.8 87 100.0
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 1.0e-41 172.9 87 98.9
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 2.3e-41 171.8 87 97.7
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 4.9e-39 164.1 87 93.1
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 3.5e-37 157.9 87 90.8
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 1.2e-34 149.4 86 86.0
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 4.0e-33 144.4 86 82.6
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 5.2e-33 144.1 85 84.7
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 1.5e-32 142.5 85 83.5
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 2.6e-32 141.7 85 84.7
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 4.4e-32 141.0 85 82.4
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 7.5e-32 140.2 85 83.5
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 7.5e-32 140.2 85 81.2
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 9.8e-32 139.8 85 82.4
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 9.8e-32 139.8 85 80.0
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 9.8e-32 139.8 85 81.2
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 1.7e-31 139.0 85 82.4
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 3.7e-31 137.9 85 82.4
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 3.7e-31 137.9 85 78.8
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 3.7e-31 137.9 85 81.2
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 6.4e-31 137.1 85 78.8
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 8.3e-31 136.7 85 80.0
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 1.4e-30 136.0 84 79.8
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 1.9e-30 135.6 82 82.9
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 1.9e-30 135.6 85 80.0
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 2.4e-30 135.2 82 79.3
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 3.2e-30 134.8 85 78.8
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 3.2e-30 134.8 85 76.5
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 3.2e-30 134.8 85 77.6
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 3.2e-30 134.8 85 78.8
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 4.1e-30 134.4 85 82.4
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 4.1e-30 134.4 85 76.5
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 7.0e-30 133.7 85 77.6
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 7.0e-30 133.7 85 77.6
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 9.2e-30 133.3 85 77.6
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.6e-29 132.5 70 91.4
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 2.1e-29 132.1 80 82.5
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 2.1e-29 132.1 85 74.1
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 2.1e-29 132.1 85 77.6
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 2.7e-29 131.7 85 76.5
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 2.7e-29 131.7 85 77.6
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 3.5e-29 131.3 85 75.3
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 6.0e-29 130.6 88 75.0
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 7.8e-29 130.2 86 74.4
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 7.8e-29 130.2 86 74.4
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 7.8e-29 130.2 86 74.4
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 7.8e-29 130.2 81 76.5
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.0e-28 129.8 84 76.2
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 1.3e-28 129.4 85 75.3
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.3e-28 129.4 70 90.0
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 1.3e-28 129.4 86 74.4
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 1.7e-28 129.0 85 76.5
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 2.3e-28 128.6 86 73.3
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 2.3e-28 128.6 86 74.4
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 2.3e-28 128.6 80 80.0
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 2.3e-28 128.6 80 80.0
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 3.0e-28 128.3 86 73.3
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 3.0e-28 128.3 86 73.3
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 3.9e-28 127.9 80 78.8
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 5.1e-28 127.5 85 74.1
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 5.1e-28 127.5 80 78.8
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 6.6e-28 127.1 86 73.3
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 6.6e-28 127.1 81 77.8
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 6.6e-28 127.1 81 77.8
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 8.6e-28 126.7 80 77.5
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 1.5e-27 125.9 86 72.1
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 3.3e-27 124.8 84 76.2
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 3.3e-27 124.8 86 72.1
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 9.5e-27 123.2 86 70.9
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 1.2e-26 122.9 80 76.2
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 6.2e-26 120.6 85 68.2
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.2e-24 116.3 73 79.5
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 2.6e-24 115.2 81 71.6
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 2.6e-24 115.2 86 65.1
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 5.8e-24 114.0 73 76.7
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 9.9e-24 113.2 86 64.0
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 6.4e-23 110.5 85 67.1
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 6.4e-23 110.5 79 69.6
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 8.3e-23 110.2 72 75.0
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 1.1e-22 109.8 85 63.5
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 1.4e-22 109.4 68 77.9
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 2.4e-22 108.6 68 77.9
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 3.2e-22 108.2 81 65.4
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 3.2e-22 108.2 84 63.1
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 4.1e-22 107.8 83 63.9
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 9.2e-22 106.7 72 72.2
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 1.2e-21 106.3 71 74.6
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 1.2e-21 106.3 85 62.4
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 4.6e-21 104.4 79 65.8
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 2.3e-20 102.1 79 65.8
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 1.5e-19 99.4 62 79.0
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 4.3e-19 97.8 79 62.0
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 7.3e-19 97.1 60 81.7
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 2.8e-18 95.1 74 71.6
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 2.8e-18 95.1 60 78.3
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 2.8e-18 95.1 82 61.0
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 3.6e-18 94.7 60 80.0
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 8.1e-18 93.6 76 68.4
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 5.2e-17 90.9 73 61.6
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 5.8e-16 87.4 55 78.2
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 1.9e-14 82.4 53 73.6
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 7.1e-14 80.5 80 51.2
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 1.2e-13 79.7 51 72.5
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 2.1e-13 79.0 93 51.6
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 5.1e-12 74.3 51 66.7
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 2.4e-09 65.5 54 61.1
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 9.0e-09 63.5 85 48.2
TAR369G0162 Trochodendron aralioides HOM05D002795 ORTHO05D000638 2.0e-08 62.4 38 78.9
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 9.9e-08 60.1 68 41.2


User provided reference genes

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