Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 4.3e-110 401.4 208 100.0
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 1.5e-107 392.9 208 98.6
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 4.5e-99 364.8 208 93.3
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 4.1e-92 341.7 214 85.0
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 4.5e-91 338.2 208 86.1
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 4.8e-85 318.2 218 80.3
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 3.6e-72 275.4 221 68.8
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 6.1e-72 274.6 213 71.4
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 8.0e-72 274.2 149 92.6
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 1.0e-71 273.9 210 71.4
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 8.8e-71 270.8 220 68.6
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 3.4e-70 268.9 214 68.7
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 1.7e-69 266.5 213 67.1
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 1.7e-69 266.5 211 70.1
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 2.2e-69 266.2 216 72.2
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 2.2e-69 266.2 218 67.9
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 4.8e-69 265.0 210 68.6
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 4.8e-69 265.0 210 68.6
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 6.3e-69 264.6 216 69.0
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 8.3e-69 264.2 171 77.8
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 1.1e-68 263.8 216 67.1
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 1.4e-68 263.5 217 68.2
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 5.4e-68 261.5 208 68.8
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 7.0e-68 261.2 217 66.8
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 7.0e-68 261.2 233 64.4
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 7.0e-68 261.2 218 66.1
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 1.6e-67 260.0 208 67.3
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 2.0e-67 259.6 210 67.6
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 2.7e-67 259.2 198 69.2
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 3.5e-67 258.8 208 68.3
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 4.5e-67 258.5 212 68.4
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.7e-66 256.5 214 67.8
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 5.0e-66 255.0 215 67.0
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 5.0e-66 255.0 217 65.4
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 1.1e-65 253.8 216 64.8
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 1.5e-65 253.4 213 66.7
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.9e-65 253.1 209 65.6
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 2.5e-65 252.7 213 63.4
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 3.3e-65 252.3 147 85.0
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 4.2e-65 251.9 208 65.9
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 5.5e-65 251.5 210 65.2
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 9.5e-65 250.8 219 64.8
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 3.6e-64 248.8 233 62.7
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 3.6e-64 248.8 147 83.7
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 6.1e-64 248.1 211 62.6
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 8.0e-64 247.7 150 80.7
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 8.0e-64 247.7 187 72.2
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 1.4e-63 246.9 214 64.0
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 1.4e-63 246.9 210 63.3
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.4e-63 246.9 228 59.6
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 3.0e-63 245.7 213 65.3
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 4.0e-63 245.4 136 86.0
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 5.2e-63 245.0 211 62.6
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 5.2e-63 245.0 218 64.2
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 8.9e-63 244.2 220 63.2
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 1.2e-62 243.8 155 77.4
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 5.7e-62 241.5 219 60.3
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 7.5e-62 241.1 208 64.9
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.3e-61 240.4 222 63.5
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.2e-61 239.6 223 62.8
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 2.8e-61 239.2 214 61.2
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 6.3e-61 238.0 211 62.1
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 1.4e-60 236.9 214 61.2
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 1.8e-60 236.5 210 63.3
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 2.4e-60 236.1 221 60.2
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 7.0e-60 234.6 212 61.8
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 9.2e-60 234.2 152 73.0
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 2.7e-59 232.6 153 72.5
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 2.7e-59 232.6 193 64.2
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 4.5e-59 231.9 211 61.1
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 5.9e-59 231.5 193 63.7
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.3e-58 229.6 214 60.7
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 2.3e-58 229.6 210 61.4
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.9e-58 229.2 205 63.9
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 5.0e-58 228.4 211 61.6
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 6.6e-58 228.0 147 75.5
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.9e-57 226.5 180 65.6
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 2.5e-57 226.1 195 66.2
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.3e-57 225.7 151 76.8
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 4.3e-57 225.3 152 71.7
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.7e-56 221.9 211 61.1
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 8.0e-56 221.1 153 69.3
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 8.9e-55 217.6 211 56.9
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 1.5e-54 216.9 222 54.1
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 1.5e-54 216.9 128 80.5
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 3.4e-54 215.7 182 63.2
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 3.4e-54 215.7 182 63.2
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 3.4e-54 215.7 190 66.8
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 9.8e-54 214.2 215 56.7
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 1.7e-53 213.4 215 57.7
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.4e-52 210.3 181 61.3
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 1.9e-52 209.9 215 57.7
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 1.9e-52 209.9 218 58.7
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.9e-52 209.9 168 57.1
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 5.4e-52 208.4 227 53.3
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 7.0e-52 208.0 153 65.4
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 2.0e-51 206.5 151 63.6
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 3.0e-50 202.6 232 55.6
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 6.8e-47 191.4 108 87.0
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 3.4e-46 189.1 109 83.5
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 9.8e-46 187.6 151 62.3
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 2.4e-44 183.0 173 61.8
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 1.1e-41 174.1 110 78.2
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 5.4e-36 155.2 150 61.3
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 7.3e-33 144.8 145 59.3
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.6e-32 143.7 159 54.7
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 3.4e-30 136.0 72 87.5
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 3.4e-30 136.0 153 53.6
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.2e-29 133.3 149 53.7
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 3.8e-29 132.5 165 51.5
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 2.4e-28 129.8 147 47.6
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 3.4e-22 109.4 68 75.0
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 3.4e-22 109.4 68 75.0
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 3.0e-18 96.3 52 92.3
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 7.3e-17 91.7 58 75.9
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 6.9e-15 85.1 100 54.0


User provided reference genes

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