Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g061990.3 Solanum lycopersicum HOM05D003331 ORTHO05D003264 4.1e-86 321.6 197 100.0
Sopen02g012950 Solanum pennellii HOM05D003331 ORTHO05D003264 1.3e-63 246.9 146 88.4
PGSC0003DMG400023897 Solanum tuberosum HOM05D003331 ORTHO05D003264 1.5e-51 206.8 157 74.5
CAN.G225.18 Capsicum annuum HOM05D000004 ORTHO05D000002 1.5e-35 153.7 173 60.7
CAN.G890.4 Capsicum annuum HOM05D003331 ORTHO05D003264 1.9e-22 110.2 189 50.3
Nitab4.5_0002337g0180 Nicotiana tabacum HOM05D003331 ORTHO05D003264 3.2e-22 109.4 163 52.1
Solyc02g083520.2 Solanum lycopersicum HOM05D003331 ORTHO05D003264 9.4e-22 107.8 207 44.9
Sopen02g028310 Solanum pennellii HOM05D003331 ORTHO05D003264 3.0e-20 102.8 197 44.2
Nitab4.5_0001789g0110 Nicotiana tabacum HOM05D003331 ORTHO05D003264 8.8e-20 101.3 159 47.2
Nitab4.5_0000188g0190 Nicotiana tabacum HOM05D003331 ORTHO05D003264 1.5e-19 100.5 154 47.4
Cfa007016 Carpinus fangiana HOM05D003331 ORTHO05D003264 1.3e-18 97.4 161 46.0
Hma1.2p1_0561F.1_g178920 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 4.8e-18 95.5 146 45.9
Thecc.01G013300 Theobroma cacao HOM05D003331 ORTHO05D003264 1.8e-17 93.6 171 43.3
Duzib147G1072 Durio zibethinus HOM05D003331 ORTHO05D003264 4.1e-17 92.4 165 41.8
COL.COLO4_22478 Corchorus olitorius HOM05D003331 ORTHO05D003264 3.5e-16 89.4 157 42.0
QL06p051331 Quercus lobata HOM05D003331 ORTHO05D003264 3.5e-16 89.4 171 40.9
Oeu020389.1 Olea europaea HOM05D003331 ORTHO05D003264 1.7e-15 87.0 141 46.1
Peaxi162Scf00439g00042 Petunia axillaris HOM05D003331 ORTHO05D003264 1.7e-15 87.0 155 48.4
Cc07_g11170 Coffea canephora HOM05D003331 ORTHO05D003264 3.8e-15 85.9 164 41.5
Peaxi162Scf00328g00414 Petunia axillaris HOM05D003331 ORTHO05D003264 1.1e-14 84.3 209 42.1
CiPaw.08G127600 Carya illinoinensis HOM05D003331 ORTHO05D003264 1.9e-14 83.6 169 40.8
Gorai.007G191800 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.6e-13 80.5 165 38.8
Haze_03715 Corylus avellana HOM05D003331 ORTHO05D003264 3.6e-13 79.3 158 39.9
Dinv40128 Davidia involucrata HOM05D003331 ORTHO05D003264 3.6e-13 79.3 100 48.0
Duzib264G0309 Durio zibethinus HOM05D003331 ORTHO05D003264 3.6e-13 79.3 164 40.2
THA.LOC104819740 Tarenaya hassleriana HOM05D003331 ORTHO05D003264 3.6e-13 79.3 182 37.9
Manes.02G109000 Manihot esculenta HOM05D003331 ORTHO05D003264 6.1e-13 78.6 168 39.3
Manes.01G149900 Manihot esculenta HOM05D003331 ORTHO05D003264 8.0e-13 78.2 167 38.3
Sabra05G0089800 Salix brachista HOM05D003331 ORTHO05D003264 8.0e-13 78.2 176 39.2
Gohir.A11G172900 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.4e-12 77.4 161 38.5
Potri.005G243400 Populus trichocarpa HOM05D003331 ORTHO05D003264 1.8e-12 77.0 178 39.3
GSVIVG01009970001 Vitis vinifera HOM05D003331 ORTHO05D003264 1.8e-12 77.0 158 37.3
PGSC0003DMG400003652 Solanum tuberosum HOM05D003331 ORTHO05D003264 3.9e-12 75.9 115 45.2
Gohir.D11G179900 Gossypium hirsutum HOM05D003331 ORTHO05D003264 8.8e-12 74.7 161 37.9
Manes.18G012121 Manihot esculenta HOM05D003331 ORTHO05D003264 8.8e-12 74.7 155 38.7
Phvul.002G105700 Phaseolus vulgaris HOM05D003331 ORTHO05D003264 8.8e-12 74.7 143 41.3
MBI08_g06420_MAGBIO Magnolia biondii HOM05D003331 ORTHO05D003264 1.1e-11 74.3 183 37.7
Sabra05G0188500 Salix brachista HOM05D003331 ORTHO05D003264 1.1e-11 74.3 189 34.4
Nn2g14480 Nelumbo nucifera HOM05D003331 ORTHO05D003264 1.5e-11 73.9 178 34.8
Potri.005G109500 Populus trichocarpa HOM05D003331 ORTHO05D003264 3.3e-11 72.8 187 36.4
GSVIVG01006332001 Vitis vinifera HOM05D003331 ORTHO05D003264 9.7e-11 71.2 113 43.4
CANSAT01G0941 Cannabis sativa HOM05D003331 ORTHO05D003264 2.2e-10 70.1 185 34.6
Glyma.02G045500 Glycine max HOM05D003331 ORTHO05D003264 2.8e-10 69.7 153 35.9
Dinv08561 Davidia involucrata HOM05D003331 ORTHO05D003264 3.7e-10 69.3 165 38.2
Cfa013989 Carpinus fangiana HOM05D003331 ORTHO05D003264 4.8e-10 68.9 189 33.3
Carub.0003s3191 Capsella rubella HOM05D003331 ORTHO05D003264 6.3e-10 68.6 155 35.5
Haze_22676 Corylus avellana HOM05D003331 ORTHO05D003264 6.3e-10 68.6 190 35.3
TWI09G0177 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 6.3e-10 68.6 159 38.4
VMungo1215G2112 Vigna mungo HOM05D003331 ORTHO05D003264 6.3e-10 68.6 150 38.7
Glyma.01G163500 Glycine max HOM05D003331 ORTHO05D003264 1.1e-09 67.8 152 35.5
Glyma.16G123451 Glycine max HOM05D003331 ORTHO05D003264 1.1e-09 67.8 150 36.7
Manes.05G144400 Manihot esculenta HOM05D003331 ORTHO05D003264 1.1e-09 67.8 174 34.5
CARHR108160 Cardamine hirsuta HOM05D003331 ORTHO05D003264 3.1e-09 66.2 150 36.7
THA.LOC104807508 Tarenaya hassleriana HOM05D003331 ORTHO05D003264 3.1e-09 66.2 164 35.4
TAR625G0644 Trochodendron aralioides HOM05D003331 ORTHO05D003264 4.1e-09 65.9 166 34.9
Aa31LG6G12860 Aethionema arabicum HOM05D003331 ORTHO05D003264 5.3e-09 65.5 176 33.0
A08p21610 Brassica napus HOM05D003331 ORTHO05D003264 9.1e-09 64.7 192 32.3
BraA08t34108Z Brassica rapa HOM05D003331 ORTHO05D003264 9.1e-09 64.7 192 32.3
Lsat_1_v5_gn_4_145080 Lactuca sativa HOM05D003331 ORTHO05D003264 9.1e-09 64.7 162 36.4
Oeu033812.1 Olea europaea HOM05D003331 ORTHO05D003264 9.1e-09 64.7 142 40.8
A03p63930 Brassica napus HOM05D003331 ORTHO05D003264 1.2e-08 64.3 169 35.5
BraA03t15462Z Brassica rapa HOM05D003331 ORTHO05D003264 1.2e-08 64.3 169 35.5
BolC7t46566H Brassica oleracea HOM05D003331 ORTHO05D003264 1.6e-08 63.9 175 34.3
Cpa.g.sc6.298 Carica papaya HOM05D003331 ORTHO05D003264 1.6e-08 63.9 122 37.7
PGR102G0808 Punica granatum HOM05D003331 ORTHO05D003264 2.0e-08 63.5 184 35.9
AL3G50780 Arabidopsis lyrata HOM05D003331 ORTHO05D003264 2.6e-08 63.2 146 35.6
BolC3t20356H Brassica oleracea HOM05D003331 ORTHO05D003264 2.6e-08 63.2 174 34.5
C07p61400 Brassica napus HOM05D003331 ORTHO05D003264 3.5e-08 62.8 176 34.1
HanXRQChr05g0133741 Helianthus annuus HOM05D003331 ORTHO05D003264 3.5e-08 62.8 159 34.6
Sp7g33680 Schrenkiella parvula HOM05D003331 ORTHO05D003264 3.5e-08 62.8 206 30.6
Aqoxy6G02126 Aquilegia oxysepala HOM05D003331 ORTHO05D003264 5.9e-08 62.0 174 33.9
BcaC01g00527 Brassica carinata HOM05D003331 ORTHO05D003264 5.9e-08 62.0 174 34.5
Actinidia02367 Actinidia chinensis HOM05D003331 ORTHO05D003264 1.0e-07 61.2 157 35.7
QL02p012465 Quercus lobata HOM05D003331 ORTHO05D003264 1.0e-07 61.2 230 33.5
Lalb_Chr16g0377411 Lupinus albus HOM05D003331 ORTHO05D003264 1.3e-07 60.8 168 36.3
Medtr5g022780 Medicago truncatula HOM05D003331 ORTHO05D003264 1.3e-07 60.8 190 35.3
MD02G1125100 Malus domestica HOM05D003331 ORTHO05D003264 1.7e-07 60.5 171 35.1
Oeu012566.1 Olea europaea HOM05D003331 ORTHO05D003264 1.7e-07 60.5 153 38.6
Thecc.08G048800 Theobroma cacao HOM05D003331 ORTHO05D003264 1.7e-07 60.5 176 33.0
CiPaw.07G145300 Carya illinoinensis HOM05D003331 ORTHO05D003264 2.2e-07 60.1 223 31.4
FAN23G2926 Fragaria x ananassa HOM05D003331 ORTHO05D003264 2.9e-07 59.7 192 33.3
HanXRQChr15g0487141 Helianthus annuus HOM05D003331 ORTHO05D003264 2.9e-07 59.7 153 34.0
AT2G17770 Arabidopsis thaliana HOM05D003331 ORTHO05D003264 3.8e-07 59.3 152 34.9
C03p80970 Brassica napus HOM05D003331 ORTHO05D003264 3.8e-07 59.3 174 33.9
Gohir.A02G173200 Gossypium hirsutum HOM05D003331 ORTHO05D003264 3.8e-07 59.3 173 34.1
RcHm_v2.0_Chr2g0098731 Rosa chinensis HOM05D003331 ORTHO05D003264 3.8e-07 59.3 191 33.0
TWI53G1588 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 3.8e-07 59.3 167 35.3
Hma1.2p1_0315F.1_g122420 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 5.0e-07 58.9 165 37.0
Carub.0007s0433 Capsella rubella HOM05D003331 ORTHO05D003264 6.5e-07 58.5 177 32.8
COL.COLO4_26108 Corchorus olitorius HOM05D003331 ORTHO05D003264 8.5e-07 58.2 161 32.3
FAN28G0558 Fragaria x ananassa HOM05D003331 ORTHO05D003264 8.5e-07 58.2 191 33.0
Thhalv10025822m.g Eutrema salsugineum HOM05D003331 ORTHO05D003264 1.1e-06 57.8 178 33.1
FAN26G3159 Fragaria x ananassa HOM05D003331 ORTHO05D003264 1.5e-06 57.4 195 32.3
BcaNung04885 Brassica carinata HOM05D003331 ORTHO05D003264 1.9e-06 57.0 171 32.7
FAN19G3075 Fragaria x ananassa HOM05D003331 ORTHO05D003264 2.5e-06 56.6 190 31.6
Sed0019142 Sechium edule HOM05D003331 ORTHO05D003264 2.5e-06 56.6 131 38.2
Duzib093G0576 Durio zibethinus HOM05D003331 ORTHO05D003264 3.2e-06 56.2 178 33.7
FvH4_1g11270 Fragaria vesca HOM05D003331 ORTHO05D003264 4.2e-06 55.8 185 33.0
AT4G35900 Arabidopsis thaliana HOM05D003331 ORTHO05D003264 5.5e-06 55.5 179 31.8
unitig_736.g22724 Utricularia gibba HOM05D003331 ORTHO05D003264 7.2e-06 55.1 141 35.5
BcaNung00784 Brassica carinata HOM05D003331 ORTHO05D003264 9.4e-06 54.7 166 31.9
A01p02810 Brassica napus HOM05D003331 ORTHO05D003264 9.4e-06 54.7 164 32.3
C01p03140 Brassica napus HOM05D003331 ORTHO05D003264 9.4e-06 54.7 166 31.9
BolC1t00299H Brassica oleracea HOM05D003331 ORTHO05D003264 9.4e-06 54.7 166 31.9
BraA01t00264Z Brassica rapa HOM05D003331 ORTHO05D003264 9.4e-06 54.7 164 32.3


User provided reference genes

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