Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027084 Sechium edule HOM05D006772 ORTHO05D008367 1.8e-69 265.8 129 100.0
Sed0022952 Sechium edule HOM05D006772 ORTHO05D008367 3.8e-48 194.9 133 75.2
MELO3C003403.2 Cucumis melo HOM05D006772 ORTHO05D008367 3.6e-38 161.8 137 65.0
CsaV3_3G049240 Cucumis sativus L. HOM05D006772 ORTHO05D008367 3.6e-38 161.8 140 64.3
Haze_08246 Corylus avellana HOM05D006772 ORTHO05D008367 1.0e-32 143.7 131 61.1
QL12p005837 Quercus lobata HOM05D006772 ORTHO05D008367 3.8e-32 141.7 130 60.8
QL12p005804 Quercus lobata HOM05D006772 ORTHO05D008367 6.5e-32 141.0 130 60.8
MD16G1275100 Malus domestica HOM05D006772 ORTHO05D008367 1.9e-31 139.4 132 56.8
Cfa012424 Carpinus fangiana HOM05D006772 ORTHO05D008367 5.5e-31 137.9 137 58.4
Nn6g33607 Nelumbo nucifera HOM05D006772 ORTHO05D008367 2.8e-30 135.6 129 57.4
Aqoxy3G02398 Aquilegia oxysepala HOM05D006772 ORTHO05D008367 3.6e-30 135.2 132 59.1
Manes.17G012000 Manihot esculenta HOM05D006772 ORTHO05D008367 1.4e-29 133.3 134 56.0
Peaxi162Scf00460g00052 Petunia axillaris HOM05D006772 ORTHO05D008367 1.8e-29 132.9 131 57.3
Potri.003G091400 Populus trichocarpa HOM05D006772 ORTHO05D008367 1.8e-29 132.9 135 56.3
COL.COLO4_17058 Corchorus olitorius HOM05D006772 ORTHO05D008367 2.3e-29 132.5 133 60.2
Prupe.5G037100 Prunus persica HOM05D006772 ORTHO05D008367 2.3e-29 132.5 129 57.4
Duzib205G2036 Durio zibethinus HOM05D006772 ORTHO05D008367 4.0e-29 131.7 130 59.2
Glyma.05G111700 Glycine max HOM05D006772 ORTHO05D008367 6.8e-29 131.0 131 55.7
Cc08_g02570 Coffea canephora HOM05D006772 ORTHO05D008367 8.8e-29 130.6 134 52.2
MD06G1033600 Malus domestica HOM05D006772 ORTHO05D008367 1.5e-28 129.8 132 55.3
Nitab4.5_0000804g0080 Nicotiana tabacum HOM05D006772 ORTHO05D008367 2.6e-28 129.0 129 55.0
Gohir.A03G001600 Gossypium hirsutum HOM05D006772 ORTHO05D008367 3.4e-28 128.6 132 59.8
Gohir.D03G170700 Gossypium hirsutum HOM05D006772 ORTHO05D008367 3.4e-28 128.6 131 57.3
Gorai.003G181100 Gossypium raimondii HOM05D006772 ORTHO05D008367 3.4e-28 128.6 131 57.3
Hma1.2p1_0991F.1_g245070 Hydrangea macrophylla HOM05D006772 ORTHO05D008367 3.4e-28 128.6 129 57.4
RcHm_v2.0_Chr7g0209491 Rosa chinensis HOM05D006772 ORTHO05D008367 3.4e-28 128.6 135 54.8
Sabra03G0061100 Salix brachista HOM05D006772 ORTHO05D008367 3.4e-28 128.6 131 56.5
Sopen08g025600 Solanum pennellii HOM05D006772 ORTHO05D008367 3.4e-28 128.6 131 54.2
Nitab4.5_0001666g0010 Nicotiana tabacum HOM05D006772 ORTHO05D008367 4.4e-28 128.3 131 54.2
Thecc.03G229400 Theobroma cacao HOM05D006772 ORTHO05D008367 4.4e-28 128.3 129 57.4
Nn1g00537 Nelumbo nucifera HOM05D006772 ORTHO05D008367 5.7e-28 127.9 133 54.9
TAR375G0733 Trochodendron aralioides HOM05D006772 ORTHO05D008367 7.5e-28 127.5 129 55.8
Ciclev10033079m.g Citrus clementina HOM05D006772 ORTHO05D008367 9.8e-28 127.1 133 54.1
Solyc08g077020.1 Solanum lycopersicum HOM05D006772 ORTHO05D008367 9.8e-28 127.1 131 53.4
CSS0016213 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 1.7e-27 126.3 129 57.4
FvH4_5g21990 Fragaria vesca HOM05D006772 ORTHO05D008367 1.7e-27 126.3 133 54.1
FAN18G1611 Fragaria x ananassa HOM05D006772 ORTHO05D008367 1.7e-27 126.3 133 54.1
CSS0038918 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 2.2e-27 125.9 129 57.4
Lj2g0019736 Lotus japonicus HOM05D006772 ORTHO05D008367 2.2e-27 125.9 135 48.9
Eucgr.E00285 Eucalyptus grandis HOM05D006772 ORTHO05D008367 2.8e-27 125.6 132 56.8
FAN08G3182 Fragaria x ananassa HOM05D006772 ORTHO05D008367 2.8e-27 125.6 133 53.4
PGSC0003DMG400043394 Solanum tuberosum HOM05D006772 ORTHO05D008367 2.8e-27 125.6 131 53.4
HanXRQChr03g0084031 Helianthus annuus HOM05D006772 ORTHO05D008367 3.7e-27 125.2 135 52.6
CANSAT21G2446 Cannabis sativa HOM05D006772 ORTHO05D008367 6.3e-27 124.4 136 52.2
FAN04G3098 Fragaria x ananassa HOM05D006772 ORTHO05D008367 6.3e-27 124.4 133 53.4
Phvul.002G006800 Phaseolus vulgaris HOM05D006772 ORTHO05D008367 1.1e-26 123.6 131 51.1
arahy.Tifrunner.gnm1.ann1.6N9PAN Arachis hypogaea HOM05D006772 ORTHO05D008367 1.4e-26 123.2 131 54.2
arahy.Tifrunner.gnm1.ann1.WNGN5W Arachis hypogaea HOM05D006772 ORTHO05D008367 1.4e-26 123.2 131 54.2
TWI15G0236 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 2.4e-26 122.5 130 55.4
FAN13G1934 Fragaria x ananassa HOM05D006772 ORTHO05D008367 3.1e-26 122.1 99 63.6
Atru.chr6.1734 Acer truncatum HOM05D006772 ORTHO05D008367 5.4e-26 121.3 127 54.3
Potri.001G142700 Populus trichocarpa HOM05D006772 ORTHO05D008367 5.4e-26 121.3 131 55.0
Sabra01G0111500 Salix brachista HOM05D006772 ORTHO05D008367 5.4e-26 121.3 133 54.1
CiPaw.12G062700 Carya illinoinensis HOM05D006772 ORTHO05D008367 7.0e-26 120.9 138 54.3
Glyma.17G155300 Glycine max HOM05D006772 ORTHO05D008367 9.2e-26 120.6 136 50.0
VMungo0251G2965 Vigna mungo HOM05D006772 ORTHO05D008367 9.2e-26 120.6 131 51.1
Rhsim07G0126400 Rhododendron simsii HOM05D006772 ORTHO05D008367 1.2e-25 120.2 131 53.4
ECA240G4560 Erigeron canadensis HOM05D000236 ORTHO05D000192 2.0e-25 119.4 126 50.8
Gohir.D12G211500 Gossypium hirsutum HOM05D006772 ORTHO05D008367 3.5e-25 118.6 131 53.4
TWI60G0285 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 5.9e-25 117.9 131 50.4
Lsat_1_v5_gn_6_78680 Lactuca sativa HOM05D006772 ORTHO05D008367 7.8e-25 117.5 139 49.6
Gohir.A12G208800 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.3e-24 116.7 131 52.7
Gorai.008G227000 Gossypium raimondii HOM05D006772 ORTHO05D008367 1.3e-24 116.7 131 52.7
Medtr5g014370 Medicago truncatula HOM05D006772 ORTHO05D008367 1.7e-24 116.3 132 49.2
PGR042G0478 Punica granatum HOM05D006772 ORTHO05D008367 1.7e-24 116.3 130 52.3
Sc01g0007510 Simmondsia chinensis HOM05D006772 ORTHO05D008367 1.7e-24 116.3 134 53.0
VMungo1215G2403 Vigna mungo HOM05D006772 ORTHO05D008367 1.7e-24 116.3 131 48.1
Psat2g173920 Pisum sativum HOM05D006772 ORTHO05D008367 2.9e-24 115.5 133 48.9
PGSC0003DMG400036785 Solanum tuberosum HOM05D006772 ORTHO05D008367 3.8e-24 115.2 118 53.4
DCAR_024967 Daucus carota HOM05D006772 ORTHO05D008367 5.0e-24 114.8 132 52.3
Glyma.11G043000 Glycine max HOM05D006772 ORTHO05D008367 5.0e-24 114.8 134 48.5
Lalb_Chr16g0379141 Lupinus albus HOM05D006772 ORTHO05D008367 5.0e-24 114.8 133 48.1
Lj4g0015139 Lotus japonicus HOM05D006772 ORTHO05D008367 1.1e-23 113.6 134 45.5
Ah.12g054950 Amaranthus hybridus HOM05D006772 ORTHO05D008367 1.5e-23 113.2 112 56.2
Eucgr.D02187 Eucalyptus grandis HOM05D006772 ORTHO05D008367 1.5e-23 113.2 131 48.9
Ca_24649_v3 Cicer arietinum L. HOM05D006772 ORTHO05D008367 1.2e-22 110.2 129 46.5
TPR.G7824 Trifolium pratense HOM05D006772 ORTHO05D008367 2.1e-22 109.4 127 46.5
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 1.4e-21 106.7 125 48.0
PGR031G2239 Punica granatum HOM05D006772 ORTHO05D008367 2.3e-21 105.9 140 45.0
MBI05_g46462_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 4.0e-21 105.1 128 50.8
MBI02_g14426_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 5.2e-21 104.8 129 51.2
Lj4g0019114 Lotus japonicus HOM05D006772 ORTHO05D008367 2.0e-20 102.8 135 43.0
Gohir.A11G030300 Gossypium hirsutum HOM05D006772 ORTHO05D008367 7.5e-20 100.9 133 47.4
Lalb_Chr05g0213971 Lupinus albus HOM05D006772 ORTHO05D008367 7.5e-20 100.9 132 42.4
CDE08G0662 Ceratophyllum demersum HOM05D006772 ORTHO05D008367 1.7e-19 99.8 124 44.4
A05p10490 Brassica napus HOM05D006772 ORTHO05D008367 2.2e-19 99.4 128 46.1
BraA05t19987Z Brassica rapa HOM05D006772 ORTHO05D008367 2.2e-19 99.4 128 46.1
BcaB02g09448 Brassica carinata HOM05D006772 ORTHO05D008367 3.7e-19 98.6 128 43.8
BolC4t22934H Brassica oleracea HOM05D006772 ORTHO05D008367 4.9e-19 98.2 128 45.3
BcaB02g09453 Brassica carinata HOM05D006772 ORTHO05D008367 8.3e-19 97.4 128 45.3
BcaB02g09458 Brassica carinata HOM05D006772 ORTHO05D008367 8.3e-19 97.4 128 45.3
BcaB02g09462 Brassica carinata HOM05D006772 ORTHO05D008367 8.3e-19 97.4 128 45.3
BcaC02g11632 Brassica carinata HOM05D006772 ORTHO05D008367 8.3e-19 97.4 128 45.3
C04p12890 Brassica napus HOM05D006772 ORTHO05D008367 8.3e-19 97.4 128 45.3
CARHR129440 Cardamine hirsuta HOM05D006772 ORTHO05D008367 3.2e-18 95.5 133 48.1
Thhalv10017432m.g Eutrema salsugineum HOM05D006772 ORTHO05D008367 3.2e-18 95.5 128 43.8
BcaC02g07718 Brassica carinata HOM05D006772 ORTHO05D008367 1.2e-17 93.6 128 42.2
C04p64260 Brassica napus HOM05D006772 ORTHO05D008367 1.2e-17 93.6 128 43.0
BolC4t27910H Brassica oleracea HOM05D006772 ORTHO05D008367 1.2e-17 93.6 128 42.2
Sp4g17500 Schrenkiella parvula HOM05D006772 ORTHO05D008367 1.2e-17 93.6 129 43.4
ATR0564G457 Amborella trichopoda HOM05D006772 ORTHO05D008367 1.6e-17 93.2 96 49.0
HPP92_011259 Vanilla planifolia HOM05D006772 ORTHO05D008367 1.6e-17 93.2 129 43.4
A04p26870 Brassica napus HOM05D006772 ORTHO05D008367 2.0e-17 92.8 128 43.0
BraA04t18187Z Brassica rapa HOM05D006772 ORTHO05D008367 2.0e-17 92.8 128 43.0
BcaB06g28837 Brassica carinata HOM05D006772 ORTHO05D008367 3.5e-17 92.0 129 42.6
THA.LOC104807956 Tarenaya hassleriana HOM05D006772 ORTHO05D008367 5.9e-17 91.3 130 46.9
AT2G35290 Arabidopsis thaliana HOM05D006772 ORTHO05D008367 1.3e-16 90.1 128 42.2
Aa31LG9G15310 Aethionema arabicum HOM05D006772 ORTHO05D008367 3.0e-16 89.0 130 43.1
Carub.0004s1698 Capsella rubella HOM05D006772 ORTHO05D008367 5.0e-16 88.2 126 42.1
AL4G31320 Arabidopsis lyrata HOM05D006772 ORTHO05D008367 6.6e-16 87.8 110 50.9
SEGI_37864 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 9.5e-15 84.0 90 50.0
CiPaw.11G092300 Carya illinoinensis HOM05D006772 ORTHO05D008367 3.4e-12 75.5 130 41.5
Os03g0170100 Oryza sativa ssp. japonica HOM05D006772 ORTHO05D008367 9.8e-12 73.9 92 46.7
Peaxi162Scf00102g00514 Petunia axillaris HOM05D006772 ORTHO05D008367 8.3e-11 70.9 128 39.8
Gohir.D11G028900 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.1e-10 70.5 108 44.4
Zm00001eb402290 Zea mays HOM05D006772 ORTHO05D008367 5.4e-10 68.2 97 44.3
SEGI_18606 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 6.0e-09 64.7 92 44.6
Mapoly0047s0021 Marchantia polymorpha HOM05D001618 ORTHO05D001486 1.3e-08 63.5 97 36.1
Dinv28946 Davidia involucrata HOM05D006772 ORTHO05D008367 3.9e-08 62.0 75 53.3
MBI02_g18931_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 3.9e-08 62.0 42 66.7
Gorai.007G031500 Gossypium raimondii HOM05D006772 ORTHO05D008367 1.5e-07 60.1 100 43.0


User provided reference genes

Program Settings