Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026946 Sechium edule HOM05D004769 ORTHO05D005605 1.3e-138 496.9 360 100.0
ClCG01G008650 Citrullus lanatus HOM05D004769 ORTHO05D005605 8.9e-111 404.4 349 90.8
CsaV3_5G020660 Cucumis sativus L. HOM05D004769 ORTHO05D005605 3.6e-104 382.5 349 87.4
MELO3C025080.2 Cucumis melo HOM05D004769 ORTHO05D005605 4.1e-100 369.0 399 76.7
Sed0006929 Sechium edule HOM05D004769 ORTHO05D005605 2.3e-98 363.2 357 79.3
CiPaw.03G077600 Carya illinoinensis HOM05D004769 ORTHO05D005605 4.1e-84 315.8 355 75.8
Haze_14305 Corylus avellana HOM05D004769 ORTHO05D005605 8.6e-82 308.1 347 75.8
Ca_05772_v3 Cicer arietinum L. HOM05D004769 ORTHO05D005605 5.2e-79 298.9 345 53.0
MD16G1242400 Malus domestica HOM05D004769 ORTHO05D005605 3.8e-77 292.7 346 70.8
Prupe.1G069400 Prunus persica HOM05D004769 ORTHO05D005605 1.1e-76 291.2 347 71.2
GSVIVG01026312001 Vitis vinifera HOM05D004769 ORTHO05D005605 1.1e-76 291.2 348 64.7
Cpa.g.sc178.7 Carica papaya HOM05D004769 ORTHO05D005605 3.2e-76 289.7 367 70.8
RcHm_v2.0_Chr4g0398571 Rosa chinensis HOM05D004769 ORTHO05D005605 4.2e-76 289.3 349 70.5
Thecc.04G060900 Theobroma cacao HOM05D004769 ORTHO05D005605 4.6e-75 285.8 352 68.8
QL02p060102 Quercus lobata HOM05D004769 ORTHO05D005605 1.0e-74 284.6 414 64.3
Cfa007768 Carpinus fangiana HOM05D004769 ORTHO05D005605 1.3e-74 284.3 351 72.9
FvH4_4g06670 Fragaria vesca HOM05D004769 ORTHO05D005605 1.7e-74 283.9 349 68.8
TAR375G0174 Trochodendron aralioides HOM05D004769 ORTHO05D005605 2.3e-74 283.5 345 55.1
MD13G1237000 Malus domestica HOM05D004769 ORTHO05D005605 6.6e-74 282.0 358 65.1
TWI74G1557 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 1.1e-73 281.2 358 64.0
Medtr5g077180 Medicago truncatula HOM05D004769 ORTHO05D005605 9.6e-73 278.1 345 68.7
Dinv19070 Davidia involucrata HOM05D004769 ORTHO05D005605 1.3e-72 277.7 357 61.3
Lalb_Chr17g0345901 Lupinus albus HOM05D004769 ORTHO05D005605 4.8e-72 275.8 351 69.5
Atru.chr1.1954 Acer truncatum HOM05D004769 ORTHO05D005605 8.1e-72 275.0 350 63.7
Dinv28230 Davidia involucrata HOM05D004769 ORTHO05D005605 1.1e-71 274.6 351 59.3
TPR.G9995 Trifolium pratense HOM05D004769 ORTHO05D005605 1.4e-71 274.2 347 70.0
Aqoxy5G00268 Aquilegia oxysepala HOM05D004769 ORTHO05D005605 2.4e-71 273.5 349 58.7
Sabra04G0050400 Salix brachista HOM05D004769 ORTHO05D005605 3.1e-71 273.1 356 61.0
PGR042G1215 Punica granatum HOM05D004769 ORTHO05D005605 1.2e-70 271.2 347 68.6
TAR374G1377 Trochodendron aralioides HOM05D004769 ORTHO05D005605 1.2e-70 271.2 349 66.8
Gohir.D08G062500 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.5e-70 270.8 347 69.7
Actinidia35715 Actinidia chinensis HOM05D004769 ORTHO05D005605 2.0e-70 270.4 347 59.7
Gorai.004G064700 Gossypium raimondii HOM05D004769 ORTHO05D005605 2.0e-70 270.4 347 67.7
Eucgr.J01630 Eucalyptus grandis HOM05D004769 ORTHO05D005605 4.4e-70 269.2 347 68.6
VMungo0647G0921 Vigna mungo HOM05D004769 ORTHO05D005605 4.4e-70 269.2 355 68.7
ECA233G3826 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.8e-70 268.9 346 60.7
MBI04_g35346_MAGBIO Magnolia biondii HOM05D004769 ORTHO05D005605 7.6e-70 268.5 345 69.3
Potri.004G075700 Populus trichocarpa HOM05D004769 ORTHO05D005605 7.6e-70 268.5 347 60.5
Gohir.A08G052900 Gossypium hirsutum HOM05D004769 ORTHO05D005605 1.3e-69 267.7 347 69.7
FAN22G0974 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.7e-69 267.3 334 69.2
PSO170G3102 Papaver somniferum HOM05D004769 ORTHO05D005605 2.2e-69 266.9 352 63.9
Potri.017G144121 Populus trichocarpa HOM05D004769 ORTHO05D005605 2.2e-69 266.9 349 65.3
PSO017G5633 Papaver somniferum HOM05D004769 ORTHO05D005605 2.9e-69 266.5 353 66.0
FAN17G2568 Fragaria x ananassa HOM05D004769 ORTHO05D005605 6.4e-69 265.4 334 68.0
FAN07G0829 Fragaria x ananassa HOM05D004769 ORTHO05D005605 8.4e-69 265.0 333 67.9
Hma1.2p1_0034F.1_g021310 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 8.4e-69 265.0 150 84.7
CANSAT78G2338 Cannabis sativa HOM05D004769 ORTHO05D005605 1.1e-68 264.6 361 67.6
TWI77G0470 Tripterygium wilfordii HOM05D004769 ORTHO05D005605 1.9e-68 263.8 346 66.2
Hma1.2p1_0158F.1_g069800 Hydrangea macrophylla HOM05D004769 ORTHO05D005605 3.2e-68 263.1 349 57.9
Nn1g02020 Nelumbo nucifera HOM05D004769 ORTHO05D005605 3.2e-68 263.1 358 65.1
Glyma.14G211600 Glycine max HOM05D004769 ORTHO05D005605 5.4e-68 262.3 353 72.5
Phvul.008G239200 Phaseolus vulgaris HOM05D004769 ORTHO05D005605 5.4e-68 262.3 346 71.4
COL.COLO4_05842 Corchorus olitorius HOM05D004769 ORTHO05D005605 9.3e-68 261.5 347 49.0
FAN12G3741 Fragaria x ananassa HOM05D004769 ORTHO05D005605 9.3e-68 261.5 339 68.1
Carub.0007s3249 Capsella rubella HOM05D004769 ORTHO05D005605 2.1e-67 260.4 353 62.3
THA.LOC104823824 Tarenaya hassleriana HOM05D004769 ORTHO05D005605 2.1e-67 260.4 345 63.8
Lsat_1_v5_gn_8_18601 Lactuca sativa HOM05D004769 ORTHO05D005605 2.3e-66 256.9 348 56.3
Cc07_g12960 Coffea canephora HOM05D004769 ORTHO05D005605 3.0e-66 256.5 361 53.7
Sp7g05100 Schrenkiella parvula HOM05D004769 ORTHO05D005605 3.9e-66 256.1 351 50.1
HanXRQChr08g0218471 Helianthus annuus HOM05D004769 ORTHO05D005605 6.6e-66 255.4 347 64.3
EL10Ac6g13916 Beta vulgaris HOM05D004769 ORTHO05D005605 8.7e-66 255.0 359 56.0
Glyma.02G241900 Glycine max HOM05D004769 ORTHO05D005605 8.7e-66 255.0 398 60.6
Sc11g0004750 Simmondsia chinensis HOM05D004769 ORTHO05D005605 8.7e-66 255.0 347 62.8
HPP92_017811 Vanilla planifolia HOM05D004769 ORTHO05D005605 8.7e-66 255.0 345 54.2
AUR62017457 Chenopodium quinoa HOM05D004769 ORTHO05D005605 1.1e-65 254.6 349 49.9
MSTRG.3686 Avicennia marina HOM05D004769 ORTHO05D005605 1.9e-65 253.8 344 66.0
BolC4t25993H Brassica oleracea HOM05D004769 ORTHO05D005605 1.9e-65 253.8 350 55.7
DCAR_028435 Daucus carota HOM05D004769 ORTHO05D005605 4.3e-65 252.7 150 82.0
arahy.Tifrunner.gnm1.ann1.SAK0JK Arachis hypogaea HOM05D004769 ORTHO05D005605 5.6e-65 252.3 379 68.3
CSS0001926 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 5.6e-65 252.3 152 81.6
Lj4A255T24 Lonicera japonica HOM05D004769 ORTHO05D005605 5.6e-65 252.3 344 56.4
AUR62032521 Chenopodium quinoa HOM05D004769 ORTHO05D005605 7.3e-65 251.9 346 45.1
C04p44180 Brassica napus HOM05D004769 ORTHO05D005605 3.6e-64 249.6 350 55.4
A04p10540 Brassica napus HOM05D004769 ORTHO05D005605 8.1e-64 248.4 347 57.6
Os05g0178900 Oryza sativa ssp. japonica HOM05D004769 ORTHO05D005605 8.1e-64 248.4 357 61.9
unitig_748.g7024 Utricularia gibba HOM05D004769 ORTHO05D005605 1.1e-63 248.1 150 82.0
CARHR215720 Cardamine hirsuta HOM05D004769 ORTHO05D005605 1.8e-63 247.3 351 57.8
Thhalv10027788m.g Eutrema salsugineum HOM05D004769 ORTHO05D005605 3.1e-63 246.5 347 62.2
Lalb_Chr04g0251441 Lupinus albus HOM05D004769 ORTHO05D005605 4.0e-63 246.1 345 72.2
SEGI_40758 Sequoiadendron giganteum HOM05D004769 ORTHO05D005605 6.9e-63 245.4 149 79.2
Oeu029083.1 Olea europaea HOM05D004769 ORTHO05D005605 9.0e-63 245.0 346 57.2
Rhsim10G0183300 Rhododendron simsii HOM05D004769 ORTHO05D005605 9.0e-63 245.0 346 67.6
ATR0083G043 Amborella trichopoda HOM05D004769 ORTHO05D005605 2.0e-62 243.8 349 55.3
Ciclev10015797m.g Citrus clementina HOM05D004769 ORTHO05D005605 2.6e-62 243.4 358 62.8
Migut.H02243 Erythranthe guttata HOM05D004769 ORTHO05D005605 2.6e-62 243.4 347 60.2
vmacro20487 Vaccinium macrocarpon HOM05D004769 ORTHO05D005605 2.6e-62 243.4 140 83.6
Zm00001eb377290 Zea mays HOM05D004769 ORTHO05D005605 5.8e-62 242.3 356 46.6
AL7G46000 Arabidopsis lyrata HOM05D004769 ORTHO05D005605 9.9e-62 241.5 345 59.7
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 2.9e-61 240.0 147 78.9
Duzib211G0206 Durio zibethinus HOM05D004769 ORTHO05D005605 4.9e-61 239.2 327 72.5
SGA_v2.0_scaffold115G32089 Striga asiatica HOM05D004769 ORTHO05D005605 1.1e-60 238.0 130 86.9
SGA_v2.0_scaffold45G17131 Striga asiatica HOM05D004769 ORTHO05D005605 1.1e-60 238.0 143 81.8
Lj2C513G15 Lonicera japonica HOM05D004769 ORTHO05D005605 1.4e-60 237.7 140 80.7
BcaC02g09560 Brassica carinata HOM05D004769 ORTHO05D005605 3.2e-60 236.5 350 53.7
CDE02G1258 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.2e-59 234.6 329 51.4
Peaxi162Scf00442g00627 Petunia axillaris HOM05D004769 ORTHO05D005605 1.2e-59 234.6 345 62.9
Nitab4.5_0005193g0040 Nicotiana tabacum HOM05D004769 ORTHO05D005605 6.0e-59 232.3 347 64.0
BraA04t16720Z Brassica rapa HOM05D004769 ORTHO05D005605 1.3e-58 231.1 345 55.4
Nitab4.5_0000574g0160 Nicotiana tabacum HOM05D004769 ORTHO05D005605 1.3e-58 231.1 346 63.9
Migut.K01113 Erythranthe guttata HOM05D004769 ORTHO05D005605 1.8e-58 230.7 133 82.7
CAN.G525.4 Capsicum annuum HOM05D004769 ORTHO05D005605 3.3e-57 226.5 347 63.4
Pp3c17_5870 Physcomitrium patens HOM05D004769 ORTHO05D005605 4.3e-57 226.1 148 73.6
Solyc04g014560.4 Solanum lycopersicum HOM05D004769 ORTHO05D005605 7.4e-57 225.3 150 73.3
PGSC0003DMG400023617 Solanum tuberosum HOM05D004769 ORTHO05D005605 1.3e-56 224.6 346 62.4
Ah.02g128700 Amaranthus hybridus HOM05D004769 ORTHO05D005605 8.1e-56 221.9 414 52.2
Pp3c14_14980 Physcomitrium patens HOM05D004769 ORTHO05D005605 1.1e-55 221.5 133 75.9
Pp3c14_14989 Physcomitrium patens HOM05D004769 ORTHO05D005605 1.1e-55 221.5 133 75.9
Sopen04g006720 Solanum pennellii HOM05D004769 ORTHO05D005605 1.4e-55 221.1 347 63.1
MapolyY_B0025 Marchantia polymorpha HOM05D004769 ORTHO05D005605 1.2e-54 218.0 148 72.3
SMO351G0501 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 1.7e-53 214.2 135 74.1
Oeu032315.1 Olea europaea HOM05D004769 ORTHO05D005605 2.2e-53 213.8 420 48.3
Zm00001eb283000 Zea mays HOM05D004769 ORTHO05D005605 2.1e-51 207.2 328 52.4
Manes.02G080000 Manihot esculenta HOM05D004769 ORTHO05D005605 2.7e-51 206.8 320 68.8
Mapoly0017s0020 Marchantia polymorpha HOM05D004769 ORTHO05D005605 3.5e-51 206.5 144 70.1
LjContig00141g0012428 Lotus japonicus HOM05D004769 ORTHO05D005605 1.5e-49 201.1 393 39.2
CBR_g22246 Chara braunii HOM05D004769 ORTHO05D005605 2.8e-48 196.8 147 67.3
AT5G37370 Arabidopsis thaliana HOM05D004769 ORTHO05D005605 5.1e-42 176.0 314 53.8
Lalb_Chr10g0104101 Lupinus albus HOM05D004769 ORTHO05D005605 3.3e-41 173.3 295 65.1
Psat2g044720 Pisum sativum HOM05D004769 ORTHO05D005605 1.8e-39 167.5 312 63.8
Cre03.g178300 Chlamydomonas reinhardtii HOM05D004769 ORTHO05D005605 2.2e-32 144.1 144 56.2
PRCOL_00000163 Prasinoderma coloniale HOM05D004769 ORTHO05D005605 1.4e-28 131.3 122 54.9
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 9.4e-28 128.6 264 63.3
SMO231G0026 Selaginella moellendorffii HOM05D004769 ORTHO05D005605 1.2e-27 128.3 94 70.2
CDE02G3274 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 2.7e-27 127.1 59 93.2
ATR0127G005 Amborella trichopoda HOM05D004769 ORTHO05D005605 4.7e-27 126.3 77 80.5
MCO07G113 Micromonas commoda HOM05D004769 ORTHO05D005605 1.1e-25 121.7 136 47.8
FAN07G1815 Fragaria x ananassa HOM05D004769 ORTHO05D005605 2.6e-25 120.6 259 57.5
Lj2g0009880 Lotus japonicus HOM05D004769 ORTHO05D005605 4.1e-23 113.2 66 74.2
Lalb_Chr10g0104091 Lupinus albus HOM05D004769 ORTHO05D005605 1.2e-22 111.7 53 90.6
CDE02G3573 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 2.0e-22 110.9 270 37.8
CSS0036345 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 3.8e-21 106.7 304 51.0
CSS0045560 Camellia sinensis var. sinensis HOM05D004769 ORTHO05D005605 5.0e-21 106.3 54 87.0
Lj1g0013083 Lotus japonicus HOM05D004769 ORTHO05D005605 2.5e-20 104.0 53 84.9
Lj1g0013060 Lotus japonicus HOM05D004769 ORTHO05D005605 2.6e-17 94.0 52 76.9
CDE02G0598 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 1.8e-15 87.8 41 87.8
Actinidia28787 Actinidia chinensis HOM05D004769 ORTHO05D005605 3.5e-14 83.6 322 43.8
SMO351G0097 Selaginella moellendorffii HOM05D007698 ORTHO05D009663 3.5e-14 83.6 79 50.6
FAN23G0276 Fragaria x ananassa HOM05D004769 ORTHO05D005605 5.5e-12 76.3 111 56.8
AagrBONN_evm.TU.Sc2ySwM_344.2680 Anthoceros agrestis HOM05D004769 ORTHO05D005605 7.2e-12 75.9 261 55.2
Ciclev10018227m.g Citrus clementina HOM05D004769 ORTHO05D005605 1.4e-07 61.6 49 59.2
CDE02G0875 Ceratophyllum demersum HOM05D004769 ORTHO05D005605 7.0e-07 59.3 66 51.5


User provided reference genes

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