Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 6.7e-182 640.6 327 100.0
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 1.6e-159 566.2 330 89.4
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 5.5e-152 541.2 330 87.6
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 8.5e-137 490.7 275 92.4
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 4.7e-127 458.4 331 74.3
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 6.1e-127 458.0 318 76.7
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 8.0e-127 457.6 282 82.6
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 1.0e-126 457.2 307 76.9
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 1.8e-126 456.4 320 73.1
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 2.3e-126 456.1 315 76.5
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 4.0e-126 455.3 332 73.8
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 8.9e-126 454.1 325 73.8
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 1.2e-125 453.8 332 73.5
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 1.2e-125 453.8 332 73.5
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 2.0e-125 453.0 336 72.3
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 2.6e-125 452.6 316 75.0
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 4.4e-125 451.8 332 73.2
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 5.7e-125 451.4 333 72.4
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 1.7e-124 449.9 284 79.9
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 1.7e-124 449.9 325 74.2
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 2.8e-124 449.1 320 73.1
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 3.7e-124 448.7 284 80.6
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 3.7e-124 448.7 324 72.2
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 4.9e-124 448.4 281 82.2
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 4.9e-124 448.4 323 73.7
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 6.3e-124 448.0 300 76.3
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 8.3e-124 447.6 334 71.6
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 4.1e-123 445.3 317 73.8
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 9.2e-123 444.1 309 73.1
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 9.2e-123 444.1 327 70.6
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 9.2e-123 444.1 323 70.9
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 9.2e-123 444.1 315 73.0
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 2.0e-122 443.0 330 72.1
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 4.5e-122 441.8 282 79.4
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 4.5e-122 441.8 327 71.3
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 7.8e-122 441.0 328 72.0
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 7.8e-122 441.0 325 70.5
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 2.3e-121 439.5 307 74.9
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 3.9e-121 438.7 279 78.9
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 5.0e-121 438.3 304 74.3
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 5.0e-121 438.3 321 72.0
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 6.6e-121 438.0 295 75.9
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 6.6e-121 438.0 320 71.2
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.5e-120 436.8 267 80.9
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 1.9e-120 436.4 285 77.2
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 1.9e-120 436.4 304 73.7
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 2.5e-120 436.0 282 79.1
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 4.3e-120 435.3 297 75.1
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 7.3e-120 434.5 313 72.2
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 9.5e-120 434.1 298 74.8
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 1.6e-119 433.3 315 72.4
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 8.0e-119 431.0 306 73.5
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 1.0e-118 430.6 280 77.5
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 1.0e-118 430.6 317 71.0
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 1.8e-118 429.9 311 72.0
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 1.8e-118 429.9 310 71.9
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 1.8e-118 429.9 283 77.7
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 2.3e-118 429.5 277 76.9
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 3.1e-118 429.1 277 76.9
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 3.1e-118 429.1 280 77.5
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 5.2e-118 428.3 315 71.1
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 5.2e-118 428.3 280 77.9
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 5.2e-118 428.3 319 70.8
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 6.8e-118 427.9 322 70.2
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 6.8e-118 427.9 318 70.8
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 8.9e-118 427.6 281 75.8
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 8.9e-118 427.6 310 72.3
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 1.2e-117 427.2 313 71.2
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 1.5e-117 426.8 277 76.5
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 1.5e-117 426.8 279 77.4
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 2.6e-117 426.0 342 66.1
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 4.4e-117 425.2 277 76.2
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 4.4e-117 425.2 277 76.2
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 1.3e-116 423.7 318 69.5
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 2.9e-116 422.5 339 65.8
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 1.1e-115 420.6 272 75.4
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 1.1e-115 420.6 332 69.3
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 4.1e-115 418.7 293 73.7
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 5.4e-115 418.3 293 73.7
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 7.0e-115 417.9 311 70.7
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 2.0e-114 416.4 316 69.9
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 1.6e-111 406.8 235 86.0
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 1.6e-111 406.8 235 86.0
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.1e-111 406.4 260 78.5
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 2.1e-111 406.4 315 68.9
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 3.6e-111 405.6 281 74.0
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 1.8e-110 403.3 253 79.1
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 2.0e-109 399.8 282 73.0
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 2.4e-107 392.9 294 66.7
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 5.4e-107 391.7 278 71.9
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 2.1e-106 389.8 233 82.8
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 3.5e-106 389.0 316 67.4
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 4.6e-106 388.7 346 64.5
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 2.3e-105 386.3 231 82.7
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 2.8e-103 379.4 309 67.0
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 8.1e-103 377.9 335 61.8
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 1.1e-102 377.5 238 77.3
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 1.2e-101 374.0 304 65.5
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 5.8e-101 371.7 278 66.9
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 3.0e-97 359.4 269 65.8
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 4.0e-94 349.0 264 65.9
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 2.0e-93 346.7 305 58.4
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 4.2e-91 339.0 207 79.7
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 4.3e-88 328.9 280 60.7
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 1.2e-85 320.9 310 56.1
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 7.6e-85 318.2 267 57.7
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 3.2e-83 312.8 310 55.5
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 6.7e-73 278.5 278 52.2
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 1.7e-68 263.8 218 68.3
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 3.2e-67 259.6 286 53.5
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.1e-59 234.6 245 54.7
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 9.3e-59 231.5 229 57.2
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 5.3e-54 215.7 214 57.9
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 9.4e-51 204.9 161 68.9
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 2.2e-39 167.2 103 74.8
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 1.3e-23 114.8 71 76.1
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 1.6e-18 97.8 70 64.3
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 2.8e-10 70.5 41 78.0
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 4.4e-08 63.2 64 56.2


User provided reference genes

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