Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 2.7e-89 332.0 173 100.0
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 7.7e-44 181.0 104 89.4
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 1.7e-43 179.9 104 87.5
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 5.0e-43 178.3 104 86.5
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 3.9e-40 168.7 104 80.8
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 1.5e-39 166.8 104 78.8
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 1.5e-39 166.8 104 78.8
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 2.0e-39 166.4 102 82.4
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 4.3e-39 165.2 104 80.8
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 1.3e-38 163.7 104 79.8
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 1.3e-38 163.7 104 79.8
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 1.7e-38 163.3 104 77.9
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 2.8e-38 162.5 104 77.9
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 4.8e-38 161.8 104 78.8
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 6.3e-38 161.4 102 78.4
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 8.2e-38 161.0 105 80.0
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 1.1e-37 160.6 104 77.9
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 1.4e-37 160.2 95 86.3
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 1.4e-37 160.2 102 78.4
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 1.8e-37 159.8 104 76.9
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.8e-37 159.8 104 79.8
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 2.4e-37 159.5 104 77.9
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 3.1e-37 159.1 105 77.1
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 4.1e-37 158.7 104 76.9
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 5.3e-37 158.3 104 73.1
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 9.1e-37 157.5 104 77.9
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 9.1e-37 157.5 102 77.5
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 2.0e-36 156.4 103 78.6
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 2.6e-36 156.0 103 75.7
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 2.6e-36 156.0 103 75.7
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 5.9e-36 154.8 105 76.2
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 5.9e-36 154.8 105 74.3
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 1.0e-35 154.1 105 76.2
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 2.9e-35 152.5 104 74.0
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 5.0e-35 151.8 99 77.8
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 6.5e-35 151.4 104 76.0
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 6.5e-35 151.4 105 76.2
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 8.5e-35 151.0 111 72.1
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 1.1e-34 150.6 103 76.7
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 1.1e-34 150.6 104 71.2
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.1e-34 150.6 100 76.0
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 1.4e-34 150.2 104 74.0
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 2.5e-34 149.4 105 75.2
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 3.2e-34 149.1 104 73.1
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 3.2e-34 149.1 104 72.1
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 4.2e-34 148.7 104 73.1
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 5.5e-34 148.3 104 72.1
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 9.4e-34 147.5 102 72.5
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 2.7e-33 146.0 104 71.2
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 4.7e-33 145.2 104 71.2
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 7.9e-33 144.4 103 71.8
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 1.1e-31 140.6 95 75.8
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.1e-31 140.6 101 73.3
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 1.5e-31 140.2 99 71.7
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 2.6e-31 139.4 95 76.8
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 2.6e-31 139.4 99 72.7
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 2.6e-31 139.4 97 72.2
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 2.6e-31 139.4 102 69.6
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 9.7e-31 137.5 104 66.3
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 9.7e-31 137.5 102 70.6
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 1.3e-30 137.1 103 69.9
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 1.3e-30 137.1 92 76.1
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 2.8e-30 136.0 104 66.3
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 6.3e-30 134.8 99 66.7
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 2.4e-29 132.9 92 72.8
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 3.1e-29 132.5 92 71.7
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 7.0e-29 131.3 92 71.7
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 7.0e-29 131.3 104 64.4
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 9.1e-29 131.0 92 72.8
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 1.2e-28 130.6 90 73.3
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 2.0e-28 129.8 89 71.9
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 2.6e-28 129.4 103 68.0
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 2.6e-28 129.4 92 70.7
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 1.3e-27 127.1 92 69.6
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 1.3e-27 127.1 92 69.6
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 1.7e-27 126.7 103 66.0
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 2.9e-27 125.9 90 71.1
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 2.9e-27 125.9 90 71.1
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 2.9e-27 125.9 90 71.1
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 5.0e-27 125.2 92 68.5
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 1.1e-26 124.0 92 69.6
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 1.1e-26 124.0 94 72.3
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 1.5e-26 123.6 90 68.9
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 1.5e-26 123.6 91 69.2
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 2.5e-26 122.9 105 61.9
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 2.5e-26 122.9 102 63.7
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 7.2e-26 121.3 100 61.0
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 1.6e-25 120.2 89 69.7
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 1.6e-25 120.2 93 65.6
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 6.7e-24 114.8 77 76.6
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 8.8e-24 114.4 76 77.6
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 3.3e-23 112.5 76 73.7
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 1.1e-21 107.5 90 64.4
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 1.1e-21 107.5 76 69.7
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 1.4e-21 107.1 76 72.4
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 2.4e-21 106.3 99 53.5
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 3.1e-21 105.9 75 70.7
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 7.0e-21 104.8 79 67.1
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 7.0e-21 104.8 88 65.9
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 8.5e-19 97.8 88 61.4
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 1.1e-18 97.4 93 59.1
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 1.1e-18 97.4 78 65.4
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 1.1e-18 97.4 100 56.0
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 1.1e-18 97.4 64 78.1
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 1.9e-18 96.7 64 73.4
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 2.5e-18 96.3 74 66.2
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 3.2e-18 95.9 74 66.2
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 3.2e-18 95.9 73 65.8
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 6.3e-14 81.6 96 46.9
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 1.1e-13 80.9 87 48.3
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 2.4e-13 79.7 75 58.7
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 3.5e-12 75.9 86 46.5
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 2.2e-11 73.2 98 48.0
BcaC04g19922 Brassica carinata HOM05D006914 ORTHO05D008583 3.8e-11 72.4 52 69.2
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 6.5e-11 71.6 62 66.1
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 6.5e-11 71.6 86 50.0
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 1.2e-09 67.4 87 43.7
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 2.2e-06 56.6 100 39.0


User provided reference genes

Program Settings