Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025765 Sechium edule HOM05D006885 ORTHO05D008606 3.5e-32 141.0 69 100.0
ClCG06G001860 Citrullus lanatus HOM05D006885 ORTHO05D008606 1.9e-30 135.2 68 94.1
CsaV3_6G007910 Cucumis sativus L. HOM05D006885 ORTHO05D008606 4.7e-29 130.6 68 91.2
RcHm_v2.0_Chr4g0429451 Rosa chinensis HOM05D006885 ORTHO05D008606 6.8e-28 126.7 64 90.6
FvH4_4g23120 Fragaria vesca HOM05D006885 ORTHO05D008606 3.4e-27 124.4 64 89.1
FAN07G1762 Fragaria x ananassa HOM05D006885 ORTHO05D008606 3.4e-27 124.4 64 89.1
FAN12G2334 Fragaria x ananassa HOM05D006885 ORTHO05D008606 3.4e-27 124.4 64 89.1
FAN17G2783 Fragaria x ananassa HOM05D006885 ORTHO05D008606 3.4e-27 124.4 64 89.1
Manes.11G080000 Manihot esculenta HOM05D006885 ORTHO05D008606 1.7e-26 122.1 63 88.9
Ciclev10033198m.g Citrus clementina HOM05D006885 ORTHO05D008606 2.2e-26 121.7 63 87.3
CiPaw.06G106900 Carya illinoinensis HOM05D006885 ORTHO05D008606 8.4e-26 119.8 64 84.4
Ca_06520_v3 Cicer arietinum L. HOM05D006885 ORTHO05D008606 1.1e-25 119.4 68 82.4
Cfa008736 Carpinus fangiana HOM05D000120 ORTHO05D000068 1.9e-25 118.6 64 84.4
CiPaw.05G104600 Carya illinoinensis HOM05D006885 ORTHO05D008606 1.9e-25 118.6 64 84.4
Prupe.1G220300 Prunus persica HOM05D006885 ORTHO05D008606 1.9e-25 118.6 64 85.9
Dinv33305 Davidia involucrata HOM05D006885 ORTHO05D008606 2.4e-25 118.2 61 86.9
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla HOM05D006885 ORTHO05D008606 2.4e-25 118.2 61 86.9
Manes.04G090052 Manihot esculenta HOM05D006885 ORTHO05D008606 3.2e-25 117.9 63 85.7
TPR.G15605 Trifolium pratense HOM05D006885 ORTHO05D008606 3.2e-25 117.9 63 85.7
Actinidia19564 Actinidia chinensis HOM05D006885 ORTHO05D008606 5.4e-25 117.1 61 86.9
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 7.1e-25 116.7 63 82.5
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 7.1e-25 116.7 63 82.5
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 7.1e-25 116.7 63 82.5
Aqoxy5G03235 Aquilegia oxysepala HOM05D006885 ORTHO05D008606 9.2e-25 116.3 63 85.7
CANSAT01G1896 Cannabis sativa HOM05D006885 ORTHO05D008606 9.2e-25 116.3 63 84.1
Eucgr.B03538 Eucalyptus grandis HOM05D006885 ORTHO05D008606 9.2e-25 116.3 61 86.9
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 9.2e-25 116.3 61 85.2
ECA232G0525 Erigeron canadensis HOM05D006885 ORTHO05D008606 2.1e-24 115.2 63 79.4
Sabra16G0207500 Salix brachista HOM05D006885 ORTHO05D008606 2.1e-24 115.2 62 87.1
Atru.chr11.2397 Acer truncatum HOM05D006885 ORTHO05D008606 2.7e-24 114.8 64 81.2
PGR119G0226 Punica granatum HOM05D006885 ORTHO05D008606 2.7e-24 114.8 61 85.2
MD16G1125900 Malus domestica HOM05D006885 ORTHO05D008606 3.5e-24 114.4 64 85.9
TAR629G2182 Trochodendron aralioides HOM05D006885 ORTHO05D008606 3.5e-24 114.4 61 85.2
LjContig00312_ERROPOS870357g0004846 Lotus japonicus HOM05D006885 ORTHO05D008606 4.6e-24 114.0 63 84.1
Nn2g15930 Nelumbo nucifera HOM05D006885 ORTHO05D008606 4.6e-24 114.0 61 85.2
Potri.001G325000 Populus trichocarpa HOM05D006885 ORTHO05D008606 4.6e-24 114.0 62 85.5
Psat0s1880g0200 Pisum sativum HOM05D006885 ORTHO05D008606 7.8e-24 113.2 63 84.1
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 1.0e-23 112.8 61 82.0
MD13G1125100 Malus domestica HOM05D006885 ORTHO05D008606 1.0e-23 112.8 58 89.7
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 1.0e-23 112.8 57 89.5
Medtr3g074700 Medicago truncatula HOM05D006885 ORTHO05D008606 1.3e-23 112.5 63 81.0
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 1.7e-23 112.1 59 84.7
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 1.7e-23 112.1 61 82.0
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 2.3e-23 111.7 62 82.3
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 2.3e-23 111.7 62 82.3
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 3.0e-23 111.3 57 87.7
Lsat_1_v5_gn_4_1780 Lactuca sativa HOM05D006885 ORTHO05D008606 3.0e-23 111.3 63 77.8
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 3.0e-23 111.3 57 87.7
PSO017G7113 Papaver somniferum HOM05D006885 ORTHO05D008606 3.0e-23 111.3 63 84.1
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 3.9e-23 110.9 61 83.6
Phvul.008G000900 Phaseolus vulgaris HOM05D006885 ORTHO05D008606 3.9e-23 110.9 57 87.7
Dinv25633 Davidia involucrata HOM05D006885 ORTHO05D008606 5.1e-23 110.5 61 82.0
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 1.5e-22 109.0 58 82.8
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 1.5e-22 109.0 61 80.3
Cc11_g17420 Coffea canephora HOM05D006885 ORTHO05D008606 2.5e-22 108.2 61 83.6
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 2.5e-22 108.2 60 81.7
Lj6A834T26 Lonicera japonica HOM05D006885 ORTHO05D008606 2.5e-22 108.2 61 80.3
unitig_26.g10421 Utricularia gibba HOM05D006885 ORTHO05D008606 4.3e-22 107.5 57 89.5
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 5.6e-22 107.1 61 80.3
DCAR_024641 Daucus carota HOM05D006885 ORTHO05D008606 7.3e-22 106.7 61 77.0
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 2.1e-21 105.1 56 83.9
Glyma.18G300000 Glycine max HOM05D006885 ORTHO05D008606 2.8e-21 104.8 54 88.9
Haze_11752 Corylus avellana HOM05D006885 ORTHO05D008606 4.7e-21 104.0 97 56.7
Glyma.08G361800 Glycine max HOM05D006885 ORTHO05D008606 4.7e-21 104.0 60 80.0
CARHR027030 Cardamine hirsuta HOM05D006885 ORTHO05D008606 1.4e-20 102.4 62 75.8
THA.LOC104825479 Tarenaya hassleriana HOM05D006885 ORTHO05D008606 1.4e-20 102.4 60 78.3
Lalb_Chr10g0091171 Lupinus albus HOM05D006885 ORTHO05D008606 2.4e-20 101.7 57 82.5
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 3.1e-20 101.3 60 76.7
GSVIVG01000942001 Vitis vinifera HOM05D006885 ORTHO05D008606 3.1e-20 101.3 53 88.7
Thhalv10009236m.g Eutrema salsugineum HOM05D006885 ORTHO05D008606 6.9e-20 100.1 62 74.2
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 8.9e-20 99.8 62 74.2
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 8.9e-20 99.8 62 74.2
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 8.9e-20 99.8 62 74.2
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 8.9e-20 99.8 62 74.2
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 8.9e-20 99.8 62 74.2
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 8.9e-20 99.8 62 74.2
CDE05G1244 Ceratophyllum demersum HOM05D006885 ORTHO05D008606 8.9e-20 99.8 64 75.0
AT1G27435 Arabidopsis thaliana HOM05D006885 ORTHO05D008606 1.2e-19 99.4 69 69.6
Sp1g23670 Schrenkiella parvula HOM05D006885 ORTHO05D008606 1.2e-19 99.4 62 74.2
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 2.0e-19 98.6 62 72.6
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 2.0e-19 98.6 52 84.6
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 2.0e-19 98.6 52 84.6
Carub.0001s2598 Capsella rubella HOM05D006885 ORTHO05D008606 2.0e-19 98.6 67 71.6
SalBow2G1383 Salvia bowleyana HOM05D006885 ORTHO05D008606 2.0e-19 98.6 61 75.4
AL1G40850 Arabidopsis lyrata HOM05D006885 ORTHO05D008606 2.6e-19 98.2 62 72.6
MELO3C035240.2 Cucumis melo HOM05D006885 ORTHO05D008606 3.4e-19 97.8 143 43.4
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 4.4e-19 97.4 52 82.7
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 4.4e-19 97.4 52 82.7
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 4.4e-19 97.4 52 82.7
HPP92_021686 Vanilla planifolia HOM05D006885 ORTHO05D008606 5.8e-19 97.1 61 70.5
SGA_v2.0_scaffold9G04792 Striga asiatica HOM05D006885 ORTHO05D008606 7.6e-19 96.7 100 53.0
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 2.9e-18 94.7 53 83.0
HPP92_021628 Vanilla planifolia HOM05D006885 ORTHO05D008606 4.9e-18 94.0 61 68.9
ATR0582G111 Amborella trichopoda HOM05D006885 ORTHO05D008606 1.1e-17 92.8 61 77.0
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 1.2e-16 89.4 44 90.9
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 1.2e-16 89.4 61 70.5
Zm00001eb133070 Zea mays HOM05D006885 ORTHO05D008606 1.6e-16 89.0 63 63.5
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 2.7e-16 88.2 49 81.6
Zm00001eb408880 Zea mays HOM05D006885 ORTHO05D008606 2.7e-16 88.2 67 62.7
SHI04153 Sapria himalayana HOM05D006885 ORTHO05D008606 4.6e-16 87.4 61 70.5
CSS0038255 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 6.0e-16 87.0 44 88.6
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 5.1e-15 84.0 44 84.1
Sc11g0000250 Simmondsia chinensis HOM05D006885 ORTHO05D008606 5.1e-15 84.0 42 88.1
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 6.6e-15 83.6 44 84.1
MBI12_g28748_MAGBIO Magnolia biondii HOM05D006885 ORTHO05D008606 3.3e-14 81.3 45 84.4
HanXRQChr03g0067371 Helianthus annuus HOM05D006885 ORTHO05D008606 5.6e-14 80.5 44 79.5
Gohir.D07G189020 Gossypium hirsutum HOM05D006885 ORTHO05D008606 2.4e-12 75.1 47 72.3
Gorai.001G210600 Gossypium raimondii HOM05D006885 ORTHO05D008606 2.4e-12 75.1 47 72.3
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 2.0e-11 72.0 37 89.2
Gohir.A06G101502 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.2e-09 64.7 46 60.9
Pp3c6_10000 Physcomitrium patens HOM05D006885 ORTHO05D008606 4.2e-09 64.3 65 56.9
Gohir.D02G113400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 4.6e-08 60.8 34 73.5
Gorai.005G128300 Gossypium raimondii HOM05D006885 ORTHO05D008606 4.6e-08 60.8 34 73.5
TPR.G7690 Trifolium pratense HOM05D006885 ORTHO05D008606 6.0e-08 60.5 30 80.0
Mapoly0027s0032 Marchantia polymorpha HOM05D006885 ORTHO05D008606 7.4e-06 53.5 58 55.2


User provided reference genes

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