Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 9.5e-92 340.1 167 100.0
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 8.4e-64 247.3 199 66.3
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 2.1e-62 242.7 199 65.8
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 7.9e-62 240.7 199 65.8
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 5.3e-42 174.9 97 83.5
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 3.2e-39 165.6 207 49.3
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 7.2e-39 164.5 132 64.4
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 9.3e-39 164.1 124 72.6
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 1.2e-38 163.7 129 66.7
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 1.6e-38 163.3 139 61.2
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 1.6e-38 163.3 112 73.2
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.6e-38 163.3 121 69.4
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 1.6e-38 163.3 121 68.6
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 2.7e-38 162.5 97 79.4
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 2.7e-38 162.5 130 62.3
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 4.6e-38 161.8 111 70.3
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 4.6e-38 161.8 130 61.5
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 4.6e-38 161.8 143 61.5
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 6.1e-38 161.4 103 73.8
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 7.9e-38 161.0 121 70.2
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 7.9e-38 161.0 121 70.2
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 1.0e-37 160.6 140 60.0
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 1.0e-37 160.6 112 70.5
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 1.4e-37 160.2 164 56.1
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 1.4e-37 160.2 153 58.8
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.4e-37 160.2 135 63.7
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 1.4e-37 160.2 114 70.2
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 1.8e-37 159.8 175 55.4
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.8e-37 159.8 115 72.2
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.8e-37 159.8 130 61.5
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 1.8e-37 159.8 166 56.6
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 6.7e-37 157.9 90 82.2
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 6.7e-37 157.9 169 55.0
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 6.7e-37 157.9 169 55.0
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 8.8e-37 157.5 93 81.7
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.5e-36 156.8 160 57.5
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 2.5e-36 156.0 145 58.6
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 3.3e-36 155.6 124 66.9
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 3.3e-36 155.6 124 66.9
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 4.3e-36 155.2 130 63.1
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 4.3e-36 155.2 154 59.1
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 4.3e-36 155.2 120 66.7
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 4.3e-36 155.2 96 77.1
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 7.4e-36 154.5 124 67.7
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 7.4e-36 154.5 96 77.1
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 9.7e-36 154.1 207 46.9
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 9.7e-36 154.1 126 64.3
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 1.3e-35 153.7 127 63.8
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 2.2e-35 152.9 125 63.2
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 2.2e-35 152.9 111 66.7
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 2.2e-35 152.9 125 64.8
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 4.8e-35 151.8 88 77.3
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 6.3e-35 151.4 91 80.2
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 8.2e-35 151.0 125 63.2
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 8.2e-35 151.0 125 63.2
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 8.2e-35 151.0 95 73.7
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 8.2e-35 151.0 108 67.6
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 8.2e-35 151.0 93 76.3
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 1.1e-34 150.6 162 52.5
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 1.1e-34 150.6 127 61.4
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 1.1e-34 150.6 117 63.2
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 1.4e-34 150.2 128 62.5
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 1.4e-34 150.2 126 61.1
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 2.4e-34 149.4 111 64.9
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 4.1e-34 148.7 161 54.7
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 4.1e-34 148.7 139 59.0
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 5.3e-34 148.3 99 70.7
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 9.1e-34 147.5 91 74.7
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 2.0e-33 146.4 108 67.6
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 2.0e-33 146.4 151 54.3
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 2.0e-33 146.4 89 78.7
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 4.5e-33 145.2 110 64.5
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 4.5e-33 145.2 96 74.0
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 7.7e-33 144.4 158 53.2
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 1.0e-32 144.1 109 65.1
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.0e-32 144.1 95 71.6
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 1.3e-32 143.7 81 82.7
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 1.3e-32 143.7 89 76.4
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 1.7e-32 143.3 126 60.3
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 1.7e-32 143.3 97 72.2
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 2.2e-32 142.9 97 71.1
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 6.5e-32 141.4 87 74.7
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 1.1e-31 140.6 83 79.5
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 1.9e-31 139.8 143 53.8
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 5.5e-31 138.3 104 66.3
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 5.5e-31 138.3 94 69.1
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 2.1e-30 136.3 89 71.9
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 2.7e-30 136.0 89 74.2
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 2.7e-30 136.0 173 47.4
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 6.1e-30 134.8 83 73.5
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 2.3e-29 132.9 95 68.4
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 6.7e-29 131.3 104 64.4
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 2.0e-28 129.8 83 69.9
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 5.7e-28 128.3 119 55.5
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 2.2e-27 126.3 85 69.4
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 4.1e-26 122.1 88 65.9
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 6.9e-26 121.3 71 78.9
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 6.9e-26 121.3 71 78.9
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 6.9e-26 121.3 85 67.1
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 6.9e-26 121.3 73 76.7
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 1.7e-24 116.7 115 53.9
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 1.7e-24 116.7 123 57.7
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 8.5e-24 114.4 99 61.6
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 1.2e-22 110.5 82 64.6
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 1.6e-22 110.2 83 65.1
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 2.7e-22 109.4 112 58.0
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 1.4e-21 107.1 87 57.5
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 2.3e-21 106.3 107 50.5
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 3.0e-21 105.9 89 55.1
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 4.4e-20 102.1 89 56.2
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 1.1e-18 97.4 106 44.3
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 4.1e-18 95.5 109 53.2
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 1.4e-13 80.5 96 39.6
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 9.7e-12 74.3 41 82.9
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 6.3e-11 71.6 50 64.0
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.6e-09 67.0 100 49.0
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 1.6e-09 67.0 100 49.0
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 1.0e-08 64.3 54 63.0


User provided reference genes

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