Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022893 Sechium edule HOM05D000539 ORTHO05D000233 4.4e-44 181.0 100 100.0
Sed0016258 Sechium edule HOM05D000539 ORTHO05D000233 5.2e-37 157.5 84 89.3
Sed0022033 Sechium edule HOM05D000539 ORTHO05D000233 5.2e-37 157.5 76 96.1
Sed0019136 Sechium edule HOM05D000539 ORTHO05D000233 8.7e-16 87.0 64 62.5
Sed0009359 Sechium edule HOM05D000107 ORTHO05D000062 5.6e-15 84.3 65 60.0
ClCG09G008820 Citrullus lanatus HOM05D000539 ORTHO05D000233 7.4e-15 84.0 98 46.9
ClCG02G006470 Citrullus lanatus HOM05D000539 ORTHO05D000233 9.6e-15 83.6 61 60.7
MELO3C032241.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.1e-13 80.1 75 52.0
MELO3C027653.2 Cucumis melo HOM05D001963 ORTHO05D001863 4.0e-13 78.2 74 54.1
Sed0011713 Sechium edule HOM05D000539 ORTHO05D000233 6.9e-13 77.4 61 57.4
ClCG07G011140 Citrullus lanatus HOM05D000539 ORTHO05D000233 2.6e-12 75.5 66 47.0
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.6e-12 75.5 66 47.0
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 3.4e-12 75.1 66 47.0
MELO3C033323.2 Cucumis melo HOM05D000616 ORTHO05D000233 4.5e-12 74.7 94 42.6
CsaV3_4G008540 Cucumis sativus L. HOM05D000539 ORTHO05D000233 1.7e-11 72.8 55 56.4
Sed0010052 Sechium edule HOM05D000539 ORTHO05D000233 3.8e-11 71.6 66 59.1
MELO3C028785.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.1e-10 70.1 73 47.9
CsaV3_6G018640 Cucumis sativus L. HOM05D000539 ORTHO05D000233 4.2e-10 68.2 61 49.2
MELO3C028618.2 Cucumis melo HOM05D007110 ORTHO05D000592 2.1e-09 65.9 60 41.7
MELO3C033845.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.1e-09 65.9 60 50.0
MELO3C034611.2 Cucumis melo HOM05D000539 ORTHO05D000233 2.1e-09 65.9 51 58.8
MELO3C029326.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.5e-09 65.1 61 52.5
MELO3C035597.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.8e-08 62.8 59 40.7
MELO3C027188.2 Cucumis melo HOM05D000583 ORTHO05D000233 2.3e-08 62.4 60 46.7
ClCG02G009460 Citrullus lanatus HOM05D000616 ORTHO05D000233 3.0e-08 62.0 58 46.6
ClCG01G011790 Citrullus lanatus HOM05D000539 ORTHO05D000233 3.9e-08 61.6 64 43.8
MELO3C034551.2 Cucumis melo HOM05D007110 ORTHO05D000233 3.9e-08 61.6 60 40.0
PSO724G0149 Papaver somniferum HOM05D000616 ORTHO05D000233 5.1e-08 61.2 64 46.9
MELO3C029587.2 Cucumis melo HOM05D000616 ORTHO05D000233 6.7e-08 60.8 56 48.2
MELO3C027955.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.5e-07 59.7 59 47.5
MELO3C027932.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.3e-07 58.5 55 40.0
MELO3C034336.2 Cucumis melo HOM05D000539 ORTHO05D000233 3.3e-07 58.5 57 49.1
MELO3C033637.2 Cucumis melo HOM05D007110 ORTHO05D000233 4.3e-07 58.2 60 38.3
MELO3C032426.2 Cucumis melo HOM05D000616 ORTHO05D000233 5.7e-07 57.8 48 52.1
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.7e-07 57.8 65 44.6
MELO3C030669.2 Cucumis melo HOM05D000539 ORTHO05D000233 7.4e-07 57.4 57 47.4
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.4e-07 57.4 65 44.6
MELO3C027432.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.6e-06 56.2 60 36.7
FvH4_1g25001 Fragaria vesca HOM05D000539 ORTHO05D000233 1.6e-06 56.2 59 47.5
VMungo0540G0268 Vigna mungo HOM05D002644 ORTHO05D003267 1.6e-06 56.2 73 38.4
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 2.8e-06 55.5 59 44.1
Ca_02682_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 3.7e-06 55.1 59 40.7
RcHm_v2.0_Chr4g0393861 Rosa chinensis HOM05D000539 ORTHO05D000233 4.8e-06 54.7 61 42.6
RcHm_v2.0_Chr4g0407991 Rosa chinensis HOM05D000539 ORTHO05D000233 4.8e-06 54.7 61 42.6
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 4.8e-06 54.7 56 42.9
MELO3C034178.2 Cucumis melo HOM05D000539 ORTHO05D000233 6.2e-06 54.3 55 43.6
VMungo0540G0875 Vigna mungo HOM05D002644 ORTHO05D003267 6.2e-06 54.3 73 37.0


User provided reference genes

Program Settings