Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 1.1e-164 583.2 293 100.0
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 7.1e-151 537.3 293 92.2
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 8.7e-149 530.4 293 90.1
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 2.4e-146 522.3 293 89.1
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 4.0e-146 521.5 293 89.1
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 6.5e-128 461.1 295 78.3
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 3.2e-127 458.8 298 77.9
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 1.0e-125 453.8 299 77.3
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 3.9e-125 451.8 294 79.6
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 3.9e-125 451.8 294 79.6
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 3.9e-125 451.8 293 76.8
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 2.0e-124 449.5 294 79.3
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 1.7e-123 446.4 293 77.8
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 2.2e-123 446.0 294 78.2
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 3.7e-123 445.3 295 76.9
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 3.7e-123 445.3 294 78.6
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 4.8e-123 444.9 294 77.6
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 6.3e-123 444.5 294 78.2
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 1.1e-122 443.7 294 77.6
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 4.1e-122 441.8 295 76.9
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.6e-121 439.1 289 76.8
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 3.5e-121 438.7 294 76.9
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 2.2e-120 436.0 294 76.5
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.2e-120 436.0 289 76.5
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 5.0e-120 434.9 289 76.1
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 1.1e-119 433.7 289 76.1
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 1.4e-119 433.3 295 74.9
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 7.2e-119 431.0 289 75.8
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 1.2e-118 430.3 297 73.7
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 2.7e-118 429.1 295 75.3
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 4.7e-118 428.3 300 74.0
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 4.7e-118 428.3 295 74.6
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 6.1e-118 427.9 300 74.0
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 6.1e-118 427.9 292 72.9
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 1.0e-117 427.2 291 74.2
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 1.0e-117 427.2 292 72.9
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 1.4e-117 426.8 293 73.0
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 1.8e-117 426.4 293 73.7
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 3.0e-117 425.6 293 73.7
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 3.9e-117 425.2 293 73.4
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 8.8e-117 424.1 293 72.7
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 1.1e-116 423.7 293 73.4
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 1.1e-116 423.7 294 74.8
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 1.5e-116 423.3 295 73.2
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 1.5e-116 423.3 294 73.5
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 2.0e-116 422.9 293 73.0
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 2.0e-116 422.9 301 73.1
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 2.6e-116 422.5 283 75.3
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 2.6e-116 422.5 291 73.5
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 2.6e-116 422.5 295 74.2
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 2.6e-116 422.5 301 72.8
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 3.3e-116 422.2 293 73.0
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 4.4e-116 421.8 294 74.5
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 5.7e-116 421.4 293 73.4
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 5.7e-116 421.4 293 73.4
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 7.4e-116 421.0 291 73.2
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 7.4e-116 421.0 293 72.4
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 7.4e-116 421.0 293 72.4
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 7.4e-116 421.0 293 72.4
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 7.4e-116 421.0 291 73.2
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 1.3e-115 420.2 291 73.2
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 1.7e-115 419.9 294 71.1
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 2.2e-115 419.5 293 73.7
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 2.8e-115 419.1 291 72.5
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 3.7e-115 418.7 293 72.7
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 8.2e-115 417.5 294 73.1
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 8.2e-115 417.5 294 73.5
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 2.4e-114 416.0 295 72.9
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 2.4e-114 416.0 291 72.2
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 3.1e-114 415.6 293 73.4
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 5.3e-114 414.8 295 72.2
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 1.6e-113 413.3 291 71.8
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 5.9e-113 411.4 293 72.4
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 1.0e-112 410.6 297 71.7
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 1.0e-112 410.6 292 72.9
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 1.7e-112 409.8 295 72.5
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 2.9e-112 409.1 295 71.9
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 3.8e-112 408.7 295 73.2
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 6.5e-112 407.9 297 71.4
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 6.5e-112 407.9 294 72.1
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 8.5e-112 407.5 296 72.3
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 1.1e-111 407.1 297 71.4
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 1.1e-111 407.1 287 72.5
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 1.5e-111 406.8 297 71.0
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 1.9e-111 406.4 285 73.0
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 1.9e-111 406.4 295 71.2
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 2.5e-111 406.0 286 71.0
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 3.2e-111 405.6 291 72.5
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 3.2e-111 405.6 284 72.5
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 4.2e-111 405.2 296 69.9
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 5.5e-111 404.8 295 71.9
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 7.2e-111 404.4 285 72.6
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 1.2e-110 403.7 285 72.3
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 3.6e-110 402.1 297 70.0
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 3.6e-110 402.1 288 71.2
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 8.0e-110 401.0 297 70.0
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 1.4e-109 400.2 293 70.0
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 1.8e-109 399.8 284 71.5
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 3.0e-109 399.1 284 71.1
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 3.0e-109 399.1 284 71.1
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 4.0e-109 398.7 285 71.6
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 5.2e-109 398.3 289 70.6
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 8.8e-109 397.5 289 70.6
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 8.8e-109 397.5 294 69.7
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 1.2e-108 397.1 288 70.1
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 1.5e-108 396.7 287 72.5
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 2.0e-108 396.4 282 72.3
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 2.6e-108 396.0 284 71.8
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 3.3e-108 395.6 282 72.7
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 5.7e-108 394.8 287 70.7
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 1.7e-107 393.3 282 71.3
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 3.7e-107 392.1 280 68.9
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 6.3e-107 391.3 294 69.7
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 9.1e-106 387.5 283 71.0
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 1.6e-105 386.7 289 69.9
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.6e-105 386.7 294 70.4
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 5.9e-105 384.8 298 67.1
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 1.7e-104 383.3 290 69.0
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 5.0e-104 381.7 299 67.6
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 5.5e-103 378.3 299 66.9
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 5.5e-103 378.3 298 66.1
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 2.7e-102 375.9 294 67.7
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 4.7e-102 375.2 282 68.8
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 1.0e-101 374.0 290 69.0
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 4.0e-101 372.1 273 70.3
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 8.3e-99 364.4 287 67.2
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.8e-98 363.2 294 66.3
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 3.5e-97 359.0 294 65.3
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 2.9e-96 355.9 287 62.7
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 8.6e-96 354.4 298 64.1
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 9.5e-95 350.9 298 63.1
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 3.6e-94 349.0 291 62.5
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 1.8e-93 346.7 295 64.7
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 2.3e-93 346.3 288 62.8
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 1.5e-92 343.6 288 64.2
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 1.5e-92 343.6 298 62.8
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 2.6e-92 342.8 298 63.4
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 3.7e-91 339.0 296 61.5
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 1.1e-90 337.4 297 62.3
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 9.2e-90 334.3 260 64.6
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 1.2e-89 334.0 298 61.1
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 3.5e-89 332.4 301 59.1
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 1.2e-84 317.4 242 68.2
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 1.2e-81 307.4 294 58.8
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 3.1e-77 292.7 275 56.4
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 1.3e-72 277.3 217 68.7
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 1.9e-71 273.5 266 54.9
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 1.1e-69 267.7 279 52.0
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 2.3e-69 266.5 189 73.5
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 3.3e-63 246.1 266 52.6
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 6.4e-59 231.9 143 78.3
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 2.4e-58 229.9 281 49.8
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 7.8e-57 224.9 281 44.1
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 4.0e-53 212.6 152 71.1
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 7.8e-49 198.4 168 66.7
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 2.3e-48 196.8 128 73.4
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 2.3e-40 170.2 139 66.2
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 5.0e-27 125.9 283 33.2
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 8.4e-27 125.2 101 64.4
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 4.6e-25 119.4 86 69.8
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 4.3e-23 112.8 112 53.6
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 4.1e-21 106.3 112 52.7
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 1.0e-16 91.7 102 51.0
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 4.3e-15 86.3 73 58.9
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 1.0e-08 65.1 90 46.7
Ca_04590_v3 Cicer arietinum L. HOM05D005748 ORTHO05D007123 3.3e-07 60.1 150 32.0
CDE02G4569 Ceratophyllum demersum HOM05D005748 ORTHO05D007123 4.4e-07 59.7 143 34.3
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 5.7e-07 59.3 75 48.0
CiPaw.06G069600 Carya illinoinensis HOM05D005748 ORTHO05D007123 9.7e-07 58.5 152 32.2
MD16G1097300 Malus domestica HOM05D005748 ORTHO05D007123 9.7e-07 58.5 152 29.6
QL03p058965 Quercus lobata HOM05D005748 ORTHO05D007123 3.7e-06 56.6 153 32.0
Haze_12219 Corylus avellana HOM05D005748 ORTHO05D007123 4.8e-06 56.2 152 32.9
Potri.008G188600 Populus trichocarpa HOM05D005748 ORTHO05D007123 4.8e-06 56.2 130 36.2
SHI26932 Sapria himalayana HOM05D009124 ORTHO05D012381 4.8e-06 56.2 82 40.2
TAR622G1138 Trochodendron aralioides HOM05D005748 ORTHO05D007123 6.3e-06 55.8 142 33.1


User provided reference genes

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