Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 5.5e-209 730.7 366 100.0
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 8.3e-181 637.1 362 86.5
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 4.5e-179 631.3 362 85.9
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 2.8e-173 612.1 355 85.9
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 8.3e-173 610.5 362 84.5
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 4.4e-150 535.0 355 73.5
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 2.9e-149 532.3 355 72.4
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 1.9e-148 529.6 361 72.6
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 5.1e-146 521.5 355 71.8
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 8.6e-146 520.8 356 71.3
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 7.3e-145 517.7 356 71.6
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 3.6e-144 515.4 361 70.4
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 4.7e-144 515.0 356 70.8
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 6.2e-144 514.6 356 70.8
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 1.4e-143 513.5 356 70.8
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 1.4e-143 513.5 361 69.8
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 2.3e-143 512.7 361 69.3
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 3.1e-143 512.3 356 71.1
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 1.2e-142 510.4 356 70.5
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 1.2e-142 510.4 355 70.7
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 2.0e-142 509.6 356 70.5
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 4.4e-142 508.4 356 71.3
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 4.4e-142 508.4 357 68.3
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 9.9e-142 507.3 328 75.0
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 1.3e-141 506.9 356 70.2
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 1.3e-141 506.9 356 70.2
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 2.9e-141 505.8 356 69.9
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 2.9e-141 505.8 355 70.7
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 2.9e-141 505.8 362 68.5
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 4.9e-141 505.0 356 69.1
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 6.4e-141 504.6 357 70.3
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 6.4e-141 504.6 356 68.3
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 1.1e-140 503.8 356 69.9
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 1.9e-140 503.1 365 68.8
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 3.2e-140 502.3 354 68.6
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 9.2e-140 500.7 361 67.9
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 9.2e-140 500.7 364 69.2
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 9.2e-140 500.7 364 69.2
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 1.2e-139 500.4 363 68.6
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 1.6e-139 500.0 367 68.1
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 1.7e-138 496.5 356 69.4
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 3.9e-138 495.4 355 69.0
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 5.1e-138 495.0 356 68.8
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 8.6e-138 494.2 363 68.3
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 2.5e-137 492.7 357 67.2
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 4.3e-137 491.9 361 66.8
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 9.6e-137 490.7 359 69.1
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 9.6e-137 490.7 361 66.5
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 9.6e-137 490.7 364 66.5
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 1.6e-136 490.0 355 67.9
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 1.6e-136 490.0 364 68.1
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 4.7e-136 488.4 360 67.2
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 4.7e-136 488.4 360 67.2
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 4.7e-136 488.4 357 66.1
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 6.2e-136 488.0 356 66.6
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 6.2e-136 488.0 342 69.6
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 8.1e-136 487.6 366 65.6
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 1.1e-135 487.3 348 68.1
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 1.4e-135 486.9 360 66.1
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 4.0e-135 485.3 358 67.6
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 8.9e-135 484.2 358 66.5
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 1.5e-134 483.4 357 65.5
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 2.0e-134 483.0 355 66.8
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 4.4e-134 481.9 362 64.4
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 4.4e-134 481.9 355 66.8
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 5.8e-134 481.5 356 65.7
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 1.7e-133 479.9 363 63.9
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 1.7e-133 479.9 361 66.8
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 2.2e-133 479.6 378 64.8
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 2.9e-133 479.2 356 66.0
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 2.9e-133 479.2 358 67.0
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 8.4e-133 477.6 324 72.5
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 1.4e-132 476.9 331 71.0
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 1.9e-132 476.5 357 64.7
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 1.2e-131 473.8 362 66.0
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 7.8e-131 471.1 345 68.4
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 7.8e-131 471.1 356 65.4
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.1e-129 467.2 362 64.4
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.5e-129 466.8 360 61.4
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 1.9e-129 466.5 362 64.4
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 5.6e-129 464.9 373 63.0
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 7.3e-129 464.5 357 64.7
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 2.8e-128 462.6 373 63.3
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 1.2e-126 457.2 360 62.5
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 1.7e-125 453.4 338 67.5
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 1.1e-124 450.7 362 61.9
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 2.4e-124 449.5 354 60.2
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 1.2e-123 447.2 437 53.3
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 1.6e-123 446.8 354 65.3
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 2.7e-123 446.0 360 58.9
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 2.3e-122 443.0 362 63.0
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 3.9e-122 442.2 361 61.8
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 7.4e-121 438.0 307 70.0
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 2.1e-120 436.4 333 65.5
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 6.2e-120 434.9 357 59.4
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 1.5e-118 430.3 332 64.8
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 2.2e-117 426.4 311 65.3
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 3.8e-117 425.6 287 71.4
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 3.8e-117 425.6 404 57.4
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 1.8e-114 416.8 308 67.9
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 5.1e-114 415.2 424 52.8
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 5.8e-110 401.7 274 72.6
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 1.1e-108 397.5 288 67.4
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 3.0e-106 389.4 360 53.9
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 8.7e-106 387.9 361 54.6
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 1.5e-105 387.1 266 71.4
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 1.9e-100 370.2 309 58.6
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 3.6e-99 365.9 295 65.4
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 2.9e-93 346.3 355 49.3
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 1.0e-90 337.8 271 62.4
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 1.4e-90 337.4 335 55.2
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 4.1e-87 325.9 252 64.7
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 6.9e-87 325.1 265 61.5
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 3.6e-83 312.8 315 51.4
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 6.1e-83 312.0 354 48.0
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 1.2e-67 261.2 446 35.7
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 8.8e-66 255.0 356 46.1
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 4.0e-58 229.6 358 39.1
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 8.6e-53 211.8 175 65.7
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 9.5e-52 208.4 356 37.9
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.8e-50 204.1 274 48.2
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 2.0e-46 190.7 243 50.6
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 2.3e-45 187.2 209 55.5
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 1.1e-44 184.9 180 60.0
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 8.0e-43 178.7 180 58.3
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 7.0e-39 165.6 247 46.6
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 8.9e-34 148.7 111 62.2
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 1.0e-21 108.6 105 52.4
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 2.1e-19 100.9 204 37.7
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 1.4e-15 88.2 71 54.9
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 3.2e-15 87.0 72 56.9
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 2.5e-12 77.4 49 73.5
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 1.1e-10 72.0 235 26.4
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 3.8e-08 63.5 35 82.9
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.6e-06 58.2 103 35.9


User provided reference genes

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