Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020308 Sechium edule HOM05D005580 ORTHO05D006395 6.7e-126 454.1 247 100.0
Sed0002022 Sechium edule HOM05D005580 ORTHO05D006395 1.0e-113 413.7 247 86.2
MELO3C021630.2 Cucumis melo HOM05D005580 ORTHO05D006395 6.5e-113 411.0 251 87.6
ClCG09G019730 Citrullus lanatus HOM05D005580 ORTHO05D006395 4.4e-109 398.3 207 93.2
CsaV3_5G026670 Cucumis sativus L. HOM05D005580 ORTHO05D006395 2.8e-108 395.6 251 86.5
CiPaw.01G287400 Carya illinoinensis HOM05D005580 ORTHO05D006395 3.2e-96 355.5 214 81.8
CiPaw.02G183900 Carya illinoinensis HOM05D005580 ORTHO05D006395 4.7e-95 351.7 214 80.4
Thecc.10G042400 Theobroma cacao HOM05D005580 ORTHO05D006395 3.0e-94 349.0 209 80.9
MD01G1134100 Malus domestica HOM05D005580 ORTHO05D006395 4.4e-93 345.1 213 80.8
CANSAT56G2481 Cannabis sativa HOM05D005580 ORTHO05D006395 7.5e-93 344.4 216 78.7
TWI38G1118 Tripterygium wilfordii HOM05D005580 ORTHO05D006395 2.8e-92 342.4 212 79.7
Sabra08G0040500 Salix brachista HOM05D005580 ORTHO05D006395 6.3e-92 341.3 213 77.9
MD07G1198300 Malus domestica HOM05D005580 ORTHO05D006395 7.0e-91 337.8 213 79.8
QL08p059794 Quercus lobata HOM05D005580 ORTHO05D006395 1.2e-90 337.0 221 76.0
Cpa.g.sc1.404 Carica papaya HOM05D005580 ORTHO05D006395 2.0e-90 336.3 216 77.3
CANSAT56G4483 Cannabis sativa HOM05D005580 ORTHO05D006395 3.5e-90 335.5 214 77.6
FAN10G2347 Fragaria x ananassa HOM05D005580 ORTHO05D006395 1.0e-89 334.0 217 78.3
Potri.008G055800 Populus trichocarpa HOM05D005580 ORTHO05D006395 1.3e-89 333.6 207 77.8
Prupe.2G235300 Prunus persica HOM05D005580 ORTHO05D006395 1.3e-89 333.6 209 81.3
TWI63G0967 Tripterygium wilfordii HOM05D005580 ORTHO05D006395 2.2e-89 332.8 214 78.0
Cfa001474 Carpinus fangiana HOM05D005580 ORTHO05D006395 2.9e-89 332.4 219 76.7
FvH4_7g22470 Fragaria vesca HOM05D005580 ORTHO05D006395 2.9e-89 332.4 217 77.9
FAN03G1496 Fragaria x ananassa HOM05D005580 ORTHO05D006395 2.9e-89 332.4 217 77.9
Potri.010G203900 Populus trichocarpa HOM05D005580 ORTHO05D006395 2.9e-89 332.4 208 77.4
RcHm_v2.0_Chr1g0367081 Rosa chinensis HOM05D005580 ORTHO05D006395 3.8e-89 332.0 217 77.9
FAN01G0694 Fragaria x ananassa HOM05D005580 ORTHO05D006395 6.5e-89 331.3 217 77.9
FAN01G2215 Fragaria x ananassa HOM05D005580 ORTHO05D006395 6.5e-89 331.3 217 77.9
Sabra10G0157500 Salix brachista HOM05D005580 ORTHO05D006395 8.5e-89 330.9 209 76.6
Duzib128G0371 Durio zibethinus HOM05D005580 ORTHO05D006395 1.1e-88 330.5 209 78.0
Manes.07G116200 Manihot esculenta HOM05D005580 ORTHO05D006395 1.1e-88 330.5 215 75.3
FAN06G0736 Fragaria x ananassa HOM05D005580 ORTHO05D006395 4.2e-88 328.6 217 77.0
FAN06G1328 Fragaria x ananassa HOM05D005580 ORTHO05D006395 4.2e-88 328.6 217 77.0
Oeu064380.1 Olea europaea HOM05D005580 ORTHO05D006395 4.2e-88 328.6 218 75.7
vmacro07170 Vaccinium macrocarpon HOM05D005580 ORTHO05D006395 4.2e-88 328.6 210 76.7
COL.COLO4_15040 Corchorus olitorius HOM05D005580 ORTHO05D006395 9.4e-88 327.4 211 77.7
Duzib106G1822 Durio zibethinus HOM05D005580 ORTHO05D006395 2.7e-87 325.9 210 78.1
Eucgr.G02934 Eucalyptus grandis HOM05D005580 ORTHO05D006395 3.6e-87 325.5 203 77.8
CSS0041204 Camellia sinensis var. sinensis HOM05D005580 ORTHO05D006395 4.7e-87 325.1 218 76.1
Glyma.02G091600 Glycine max HOM05D005580 ORTHO05D006395 4.7e-87 325.1 211 76.3
Glyma.18G291400 Glycine max HOM05D005580 ORTHO05D006395 1.4e-86 323.6 213 75.1
Gorai.013G022300 Gossypium raimondii HOM05D005580 ORTHO05D006395 1.4e-86 323.6 211 76.3
Rhsim03G0130700 Rhododendron simsii HOM05D005580 ORTHO05D006395 1.4e-86 323.6 214 75.2
VMungo1383G1027 Vigna mungo HOM05D005580 ORTHO05D006395 1.4e-86 323.6 211 75.8
GSVIVG01016552001 Vitis vinifera HOM05D005580 ORTHO05D006395 1.8e-86 323.2 210 77.1
Lalb_Chr17g0336141 Lupinus albus HOM05D005580 ORTHO05D006395 6.8e-86 321.2 211 74.9
Gohir.A13G019300 Gossypium hirsutum HOM05D005580 ORTHO05D006395 2.0e-85 319.7 210 76.2
Phvul.008G010700 Phaseolus vulgaris HOM05D005580 ORTHO05D006395 2.0e-85 319.7 200 77.0
Gohir.D13G019900 Gossypium hirsutum HOM05D005580 ORTHO05D006395 2.6e-85 319.3 211 75.4
TAR623G0785 Trochodendron aralioides HOM05D005580 ORTHO05D006395 2.6e-85 319.3 216 71.8
Gohir.A10G218800 Gossypium hirsutum HOM05D005580 ORTHO05D006395 3.4e-85 318.9 211 73.0
Gohir.D10G228400 Gossypium hirsutum HOM05D005580 ORTHO05D006395 3.4e-85 318.9 211 73.0
Gorai.011G260800 Gossypium raimondii HOM05D005580 ORTHO05D006395 3.4e-85 318.9 211 73.0
Lsat_1_v5_gn_2_119121 Lactuca sativa HOM05D005580 ORTHO05D006395 7.5e-85 317.8 214 76.2
Nitab4.5_0013062g0010 Nicotiana tabacum HOM05D005580 ORTHO05D006395 8.3e-84 314.3 211 74.4
Manes.10G030300 Manihot esculenta HOM05D005580 ORTHO05D006395 1.1e-83 313.9 212 73.1
Atru.chr12.452 Acer truncatum HOM05D005580 ORTHO05D006395 1.4e-83 313.5 212 74.5
Atru.chr12.474 Acer truncatum HOM05D005580 ORTHO05D006395 1.4e-83 313.5 212 74.5
DCAR_011695 Daucus carota HOM05D005580 ORTHO05D006395 4.1e-83 312.0 211 76.3
Cc02_g07860 Coffea canephora HOM05D005580 ORTHO05D006395 9.1e-83 310.8 218 73.9
HanXRQChr14g0457951 Helianthus annuus HOM05D005580 ORTHO05D006395 9.1e-83 310.8 213 74.2
Lj1g0024567 Lotus japonicus HOM05D005580 ORTHO05D006395 1.6e-82 310.1 213 71.4
Nitab4.5_0001097g0030 Nicotiana tabacum HOM05D005580 ORTHO05D006395 4.5e-82 308.5 209 74.2
TAR633G1881 Trochodendron aralioides HOM05D005580 ORTHO05D006395 1.7e-81 306.6 210 70.5
MSTRG.8252 Avicennia marina HOM05D005580 ORTHO05D006395 2.3e-81 306.2 207 73.4
Psat3g161760 Pisum sativum HOM05D005580 ORTHO05D006395 3.8e-81 305.4 198 72.2
Solyc05g054450.1 Solanum lycopersicum HOM05D005580 ORTHO05D006395 3.8e-81 305.4 197 76.1
Sopen05g032940 Solanum pennellii HOM05D005580 ORTHO05D006395 5.0e-81 305.1 197 76.1
DCAR_027619 Daucus carota HOM05D005580 ORTHO05D006395 8.6e-81 304.3 218 72.0
MBI05_g22035_MAGBIO Magnolia biondii HOM05D005580 ORTHO05D006395 1.1e-80 303.9 204 73.5
Nn2g11101 Nelumbo nucifera HOM05D005580 ORTHO05D006395 2.5e-80 302.8 209 71.8
Ca_26455_v3 Cicer arietinum L. HOM05D005580 ORTHO05D006395 3.3e-80 302.4 211 72.0
SalBow6G2402 Salvia bowleyana HOM05D005580 ORTHO05D006395 4.2e-80 302.0 207 70.0
Medtr7g026320 Medicago truncatula HOM05D005580 ORTHO05D006395 5.5e-80 301.6 210 70.5
Lj8C84T10 Lonicera japonica HOM05D005580 ORTHO05D006395 7.2e-80 301.2 218 67.9
THA.LOC104810028 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 9.5e-80 300.8 213 69.0
TPR.G23775 Trifolium pratense HOM05D005580 ORTHO05D006395 1.2e-79 300.4 212 69.3
Lsat_1_v5_gn_8_15580 Lactuca sativa HOM05D005580 ORTHO05D006395 1.6e-79 300.1 198 75.8
Nn2g13341 Nelumbo nucifera HOM05D005580 ORTHO05D006395 4.7e-79 298.5 214 68.7
PGSC0003DMG400023532 Solanum tuberosum HOM05D005580 ORTHO05D006395 1.0e-78 297.4 203 73.9
Lalb_Chr10g0091641 Lupinus albus HOM05D005580 ORTHO05D006395 3.0e-78 295.8 201 71.1
Peaxi162Scf00886g00003 Petunia axillaris HOM05D005580 ORTHO05D006395 4.0e-78 295.4 194 75.3
PGR142G3643 Punica granatum HOM05D005580 ORTHO05D006395 3.4e-77 292.4 209 70.8
ECA238G1104 Erigeron canadensis HOM05D005580 ORTHO05D006395 7.5e-77 291.2 203 72.4
HPP92_019446 Vanilla planifolia HOM05D005580 ORTHO05D006395 1.7e-76 290.0 205 69.3
MELO3C023848.2 Cucumis melo HOM05D005580 ORTHO05D006395 2.4e-75 286.2 213 66.7
ClCG07G003270 Citrullus lanatus HOM05D005580 ORTHO05D006395 4.1e-75 285.4 221 64.3
CsaV3_5G008020 Cucumis sativus L. HOM05D005580 ORTHO05D006395 4.1e-75 285.4 207 66.7
HanXRQChr02g0037481 Helianthus annuus HOM05D005580 ORTHO05D006395 2.0e-74 283.1 198 71.2
Sc10g0001550 Simmondsia chinensis HOM05D005580 ORTHO05D006395 1.3e-73 280.4 220 63.6
PSO339G6083 Papaver somniferum HOM05D005580 ORTHO05D006395 2.9e-73 279.3 203 71.9
Os05g0459300 Oryza sativa ssp. japonica HOM05D005580 ORTHO05D006395 8.6e-73 277.7 183 72.7
Thhalv10010708m.g Eutrema salsugineum HOM05D005580 ORTHO05D006395 1.1e-72 277.3 207 68.1
PSO151G0057 Papaver somniferum HOM05D005580 ORTHO05D006395 1.1e-72 277.3 203 71.4
unitig_8.g3317 Utricularia gibba HOM05D005580 ORTHO05D006395 1.5e-72 276.9 206 68.4
BolC8t50680H Brassica oleracea HOM05D005580 ORTHO05D006395 1.9e-72 276.6 207 69.1
BcaC02g09755 Brassica carinata HOM05D005580 ORTHO05D006395 2.5e-72 276.2 209 67.9
A09p48340 Brassica napus HOM05D005580 ORTHO05D006395 2.5e-72 276.2 207 68.6
C04p36960 Brassica napus HOM05D005580 ORTHO05D006395 2.5e-72 276.2 209 67.9
BolC4t25261H Brassica oleracea HOM05D005580 ORTHO05D006395 2.5e-72 276.2 209 67.9
BraA09t40286Z Brassica rapa HOM05D005580 ORTHO05D006395 2.5e-72 276.2 207 68.6
Sp5g07050 Schrenkiella parvula HOM05D005580 ORTHO05D006395 2.5e-72 276.2 207 68.6
Carub.0005s2214 Capsella rubella HOM05D005580 ORTHO05D006395 3.3e-72 275.8 204 69.6
THA.LOC104824274 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 3.3e-72 275.8 204 67.6
PSO339G4490 Papaver somniferum HOM05D005580 ORTHO05D006395 4.3e-72 275.4 201 67.7
AT3G55420 Arabidopsis thaliana HOM05D005580 ORTHO05D006395 5.6e-72 275.0 204 68.6
C08p30460 Brassica napus HOM05D005580 ORTHO05D006395 7.3e-72 274.6 207 68.1
BcaC07g39844 Brassica carinata HOM05D005580 ORTHO05D006395 9.5e-72 274.2 207 68.1
BraA04t16163Z Brassica rapa HOM05D005580 ORTHO05D006395 9.5e-72 274.2 207 68.1
PSO384G2205 Papaver somniferum HOM05D005580 ORTHO05D006395 9.5e-72 274.2 201 67.2
AL5G36570 Arabidopsis lyrata HOM05D005580 ORTHO05D006395 1.2e-71 273.9 204 68.6
C08p30630 Brassica napus HOM05D005580 ORTHO05D006395 1.6e-71 273.5 207 68.1
A04p04530 Brassica napus HOM05D005580 ORTHO05D006395 2.8e-71 272.7 207 68.1
Dinv26015 Davidia involucrata HOM05D005580 ORTHO05D006395 4.7e-71 271.9 203 67.5
THA.LOC104807715 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 8.0e-71 271.2 214 64.5
BcaB01g00102 Brassica carinata HOM05D005580 ORTHO05D006395 5.2e-70 268.5 208 66.3
Sed0012553 Sechium edule HOM05D005580 ORTHO05D006395 1.7e-68 263.5 204 63.7
Aa31LG10G10450 Aethionema arabicum HOM05D005580 ORTHO05D006395 3.7e-68 262.3 194 68.0
ATR0559G355 Amborella trichopoda HOM05D005580 ORTHO05D006395 8.3e-68 261.2 213 60.6
CDE02G1824 Ceratophyllum demersum HOM05D005580 ORTHO05D006395 8.3e-68 261.2 195 67.7
SEGI_33908 Sequoiadendron giganteum HOM05D005580 ORTHO05D006395 6.6e-65 251.5 201 61.2
Ah.16g102300 Amaranthus hybridus HOM05D005580 ORTHO05D006395 2.5e-64 249.6 209 59.3
AUR62012083 Chenopodium quinoa HOM05D005580 ORTHO05D006395 3.3e-64 249.2 205 60.5
BcaC07g39859 Brassica carinata HOM05D005580 ORTHO05D006395 2.1e-63 246.5 199 63.3
Dinv03047 Davidia involucrata HOM05D005580 ORTHO05D006395 1.2e-61 240.7 217 62.2
Actinidia02948 Actinidia chinensis HOM05D005580 ORTHO05D006395 1.1e-59 234.2 216 59.7
Lj1P937T48 Lonicera japonica HOM05D005580 ORTHO05D006395 2.4e-59 233.0 143 79.0
CARHR165440 Cardamine hirsuta HOM05D005580 ORTHO05D006395 1.7e-57 226.9 164 69.5
BcaB02g08423 Brassica carinata HOM05D005580 ORTHO05D006395 2.3e-57 226.5 167 69.5
Os12g0571300 Oryza sativa ssp. japonica HOM05D005580 ORTHO05D006395 2.1e-55 219.9 196 54.6
Cc05_g01760 Coffea canephora HOM05D005580 ORTHO05D006395 2.4e-51 206.5 206 56.3
Ciclev10032947m.g Citrus clementina HOM05D005580 ORTHO05D006395 9.2e-51 204.5 120 80.0
AUR62039380 Chenopodium quinoa HOM05D000020 ORTHO05D001617 1.6e-50 203.8 162 62.3
SGA_v2.0_scaffold2G01004 Striga asiatica HOM05D005580 ORTHO05D006395 6.8e-46 188.3 121 72.7
CDE08G0377 Ceratophyllum demersum HOM05D005580 ORTHO05D006395 2.9e-44 183.0 194 53.1
Aqoxy4G02929 Aquilegia oxysepala HOM05D005580 ORTHO05D006395 1.7e-41 173.7 131 68.7
SGA_v2.0_scaffold221G42666 Striga asiatica HOM05D005580 ORTHO05D006395 6.6e-41 171.8 111 69.4
Oeu048246.1 Olea europaea HOM05D005580 ORTHO05D006395 1.9e-40 170.2 104 79.8
Migut.F01495 Erythranthe guttata HOM05D005580 ORTHO05D006395 2.1e-39 166.8 102 76.5
SEGI_21732 Sequoiadendron giganteum HOM05D003049 ORTHO05D003531 8.4e-20 101.7 62 75.8
arahy.Tifrunner.gnm1.ann1.HEV3CF Arachis hypogaea HOM05D000969 ORTHO05D011765 4.8e-15 85.9 94 51.1
Mapoly0062s0070 Marchantia polymorpha HOM05D005580 ORTHO05D006395 2.5e-08 63.5 152 30.9
AagrBONN_evm.TU.Sc2ySwM_117.4197 Anthoceros agrestis HOM05D025074 ORTHO05D006395 3.3e-08 63.2 191 25.1
AagrBONN_evm.TU.Sc2ySwM_368.2233 Anthoceros agrestis HOM05D025074 ORTHO05D006395 5.7e-08 62.4 149 28.9
AagrBONN_evm.TU.Sc2ySwM_117.4181 Anthoceros agrestis HOM05D025074 ORTHO05D006395 1.3e-07 61.2 103 31.1


User provided reference genes

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