Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019454 Sechium edule HOM05D001921 ORTHO05D001784 1.5e-80 302.8 150 100.0
ClCG11G003650 Citrullus lanatus HOM05D001921 ORTHO05D001784 3.8e-39 165.2 172 58.1
MELO3C004451.2 Cucumis melo HOM05D001921 ORTHO05D001784 1.3e-36 156.8 173 56.6
CsaV3_2G003470 Cucumis sativus L. HOM05D001921 ORTHO05D001784 9.0e-33 144.1 170 54.1
Haze_19306 Corylus avellana HOM05D001921 ORTHO05D001784 3.5e-21 105.5 153 47.1
Cfa020875 Carpinus fangiana HOM05D001921 ORTHO05D001784 3.9e-20 102.1 154 46.1
COL.COLO4_18732 Corchorus olitorius HOM05D001921 ORTHO05D001784 2.5e-19 99.4 152 44.7
Duzib187G0406 Durio zibethinus HOM05D001921 ORTHO05D001784 1.6e-18 96.7 157 43.3
Sed0017709 Sechium edule HOM05D001921 ORTHO05D001784 1.6e-18 96.7 147 49.0
Thecc.09G037400 Theobroma cacao HOM05D001921 ORTHO05D001784 6.9e-17 91.3 137 42.3
TWI34G0586 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 7.6e-16 87.8 153 43.1
Prupe.7G253300 Prunus persica HOM05D001921 ORTHO05D001784 2.2e-15 86.3 168 39.3
Cpa.g.sc46.103 Carica papaya HOM05D001921 ORTHO05D001784 2.9e-15 85.9 159 39.6
QL02p091546 Quercus lobata HOM05D001921 ORTHO05D001784 3.8e-15 85.5 165 39.4
Manes.16G126400 Manihot esculenta HOM05D001921 ORTHO05D001784 6.5e-15 84.7 155 41.9
MD02G1012300 Malus domestica HOM05D001921 ORTHO05D001784 5.5e-14 81.6 170 38.2
CiPaw.15G179300 Carya illinoinensis HOM05D001921 ORTHO05D001784 9.3e-14 80.9 150 40.0
Nn2g12262 Nelumbo nucifera HOM05D001921 ORTHO05D001784 4.6e-13 78.6 152 39.5
FAN26G0252 Fragaria x ananassa HOM05D001921 ORTHO05D001784 6.1e-13 78.2 161 37.9
MD15G1158100 Malus domestica HOM05D001921 ORTHO05D001784 6.1e-13 78.2 172 39.0
Dinv03521 Davidia involucrata HOM05D001921 ORTHO05D001784 1.0e-12 77.4 148 41.2
Psat4g034000 Pisum sativum HOM05D001921 ORTHO05D001784 1.0e-12 77.4 168 40.5
FAN23G0500 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.8e-12 76.6 163 36.8
Phvul.003G175500 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 1.5e-11 73.6 150 40.0
TPR.G15777 Trifolium pratense HOM05D001921 ORTHO05D001784 1.9e-11 73.2 154 38.3
Dinv42904 Davidia involucrata HOM05D001921 ORTHO05D001784 2.5e-11 72.8 144 39.6
Dinv43197 Davidia involucrata HOM05D001921 ORTHO05D001784 2.5e-11 72.8 144 39.6
RcHm_v2.0_Chr2g0086511 Rosa chinensis HOM05D001921 ORTHO05D001784 2.5e-11 72.8 170 38.2
Medtr4g116830 Medicago truncatula HOM05D001921 ORTHO05D001784 3.3e-11 72.4 158 37.3
FAN28G2602 Fragaria x ananassa HOM05D001921 ORTHO05D001784 4.3e-11 72.0 162 37.7
Hma1.2p1_0028F.1_g017215 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 7.4e-11 71.2 111 43.2
Hma1.2p1_2976F.1_g331170 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 7.4e-11 71.2 111 43.2
CSS0005509 Camellia sinensis var. sinensis HOM05D001921 ORTHO05D001784 9.7e-11 70.9 146 39.7
FvH4_1g01550 Fragaria vesca HOM05D001921 ORTHO05D001784 9.7e-11 70.9 162 37.0
TWI32G1277 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 9.7e-11 70.9 153 36.6
FAN19G1379 Fragaria x ananassa HOM05D001921 ORTHO05D001784 1.3e-10 70.5 162 37.0
CiPaw.08G008000 Carya illinoinensis HOM05D001921 ORTHO05D001784 1.7e-10 70.1 143 36.4
Glyma.17G104300 Glycine max HOM05D001921 ORTHO05D001784 2.2e-10 69.7 159 37.1
CiPaw.16G117000 Carya illinoinensis HOM05D001921 ORTHO05D001784 2.8e-10 69.3 150 39.3
Manes.06G040800 Manihot esculenta HOM05D001921 ORTHO05D001784 2.8e-10 69.3 167 36.5
VMungo1215G2840 Vigna mungo HOM05D001921 ORTHO05D001784 2.8e-10 69.3 151 41.1
TAR362G1200 Trochodendron aralioides HOM05D001921 ORTHO05D001784 8.2e-10 67.8 123 37.4
TWI63G1839 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 1.1e-09 67.4 143 38.5
AUR62041439 Chenopodium quinoa HOM05D001921 ORTHO05D001784 1.4e-09 67.0 143 40.6
AUR62042019 Chenopodium quinoa HOM05D001921 ORTHO05D001784 1.4e-09 67.0 143 40.6
AUR62043765 Chenopodium quinoa HOM05D001921 ORTHO05D001784 1.4e-09 67.0 143 40.6
Gohir.D06G096000 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.4e-09 67.0 127 40.9
AUR62011266 Chenopodium quinoa HOM05D001921 ORTHO05D001784 1.8e-09 66.6 139 41.0
CAN.G1045.40 Capsicum annuum HOM05D001921 ORTHO05D001784 2.4e-09 66.2 112 40.2
Dinv03420 Davidia involucrata HOM05D001921 ORTHO05D001784 2.4e-09 66.2 147 35.4
Gorai.010G110700 Gossypium raimondii HOM05D001921 ORTHO05D001784 2.4e-09 66.2 127 40.2
Rhsim03G0253600 Rhododendron simsii HOM05D001921 ORTHO05D001784 2.4e-09 66.2 130 39.2
Ah.02g128550 Amaranthus hybridus HOM05D000544 ORTHO05D001784 4.1e-09 65.5 112 41.1
EL10Ac6g15007 Beta vulgaris HOM05D001921 ORTHO05D001784 5.3e-09 65.1 84 46.4
Sopen08g012070 Solanum pennellii HOM05D001921 ORTHO05D001784 5.3e-09 65.1 112 42.0
Gohir.A06G095900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 6.9e-09 64.7 99 43.4
Lsat_1_v5_gn_6_115320 Lactuca sativa HOM05D001921 ORTHO05D001784 6.9e-09 64.7 205 30.2
PGR102G2943 Punica granatum HOM05D001921 ORTHO05D001784 6.9e-09 64.7 108 43.5
PGSC0003DMG400029898 Solanum tuberosum HOM05D001921 ORTHO05D001784 9.1e-09 64.3 140 39.3
Sc14g0000060 Simmondsia chinensis HOM05D001921 ORTHO05D001784 1.2e-08 63.9 137 38.7
Solyc08g041860.1 Solanum lycopersicum HOM05D001921 ORTHO05D001784 1.2e-08 63.9 112 41.1
TWI63G0810 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 1.2e-08 63.9 149 36.2
Ca_21607_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 1.5e-08 63.5 96 45.8
MBI18_g10965_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 2.0e-08 63.2 162 32.7
Dinv41418 Davidia involucrata HOM05D001921 ORTHO05D001784 2.6e-08 62.8 148 35.8
Gorai.010G110500 Gossypium raimondii HOM05D001921 ORTHO05D001784 2.6e-08 62.8 82 47.6
Phvul.009G208700 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 2.6e-08 62.8 71 54.9
TAR625G0682 Trochodendron aralioides HOM05D001921 ORTHO05D001784 2.6e-08 62.8 162 37.0
Glyma.13G156700 Glycine max HOM05D001921 ORTHO05D001784 4.5e-08 62.0 156 34.6
Gohir.A06G095800 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.5e-08 62.0 82 47.6
Gohir.D06G095900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.5e-08 62.0 67 52.2
TAR383G0606 Trochodendron aralioides HOM05D001921 ORTHO05D001784 5.9e-08 61.6 162 35.2
Ca_03892_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 7.7e-08 61.2 108 40.7
Aqoxy7G03512 Aquilegia oxysepala HOM05D001921 ORTHO05D001784 1.0e-07 60.8 164 32.9
CAN.G142.1 Capsicum annuum HOM05D001921 ORTHO05D001784 1.0e-07 60.8 151 37.1
Medtr2g461300 Medicago truncatula HOM05D001921 ORTHO05D001784 1.0e-07 60.8 103 41.7
Lj4g0015946 Lotus japonicus HOM05D001921 ORTHO05D001784 1.3e-07 60.5 164 34.1
Psat1g022640 Pisum sativum HOM05D001921 ORTHO05D001784 1.3e-07 60.5 111 43.2
TAR625G1323 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.7e-07 60.1 162 36.4
DCAR_014829 Daucus carota HOM05D001921 ORTHO05D001784 2.2e-07 59.7 125 39.2
Glyma.15G203400 Glycine max HOM05D001921 ORTHO05D001784 2.2e-07 59.7 67 58.2
Gorai.010G117300 Gossypium raimondii HOM05D001921 ORTHO05D001784 2.2e-07 59.7 137 35.8
Duzib212G0985 Durio zibethinus HOM05D001921 ORTHO05D001784 2.9e-07 59.3 155 31.6
Gohir.A07G030700 Gossypium hirsutum HOM05D001921 ORTHO05D001784 5.0e-07 58.5 132 36.4
Gohir.D06G102300 Gossypium hirsutum HOM05D001921 ORTHO05D001784 5.0e-07 58.5 137 35.0
Prupe.1G486700 Prunus persica HOM05D001921 ORTHO05D001784 5.0e-07 58.5 146 32.2
Rhsim02G0016000 Rhododendron simsii HOM05D001921 ORTHO05D001784 5.0e-07 58.5 156 33.3
Thecc.09G018900 Theobroma cacao HOM05D001921 ORTHO05D001784 5.0e-07 58.5 134 35.1
BcaB01g02407 Brassica carinata HOM05D001921 ORTHO05D001784 6.5e-07 58.2 110 40.9
BcaB01g02410 Brassica carinata HOM05D001921 ORTHO05D001784 6.5e-07 58.2 110 40.9
Manes.03G011300 Manihot esculenta HOM05D001921 ORTHO05D001784 6.5e-07 58.2 150 35.3
Nitab4.5_0009186g0010 Nicotiana tabacum HOM05D001921 ORTHO05D001784 6.5e-07 58.2 145 35.2
CANSAT11G0699 Cannabis sativa HOM05D001921 ORTHO05D001784 1.4e-06 57.0 176 33.0
TPR.G22804 Trifolium pratense HOM05D001921 ORTHO05D001784 1.4e-06 57.0 138 35.5
Thhalv10029029m.g Eutrema salsugineum HOM05D001921 ORTHO05D001784 2.5e-06 56.2 145 31.7
Gohir.A10G105100 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.5e-06 56.2 158 29.7
Gorai.011G182400 Gossypium raimondii HOM05D001921 ORTHO05D001784 2.5e-06 56.2 158 29.7
A03p61190 Brassica napus HOM05D001921 ORTHO05D001784 3.2e-06 55.8 142 35.2
BraA03t15157Z Brassica rapa HOM05D001921 ORTHO05D001784 3.2e-06 55.8 141 35.5
BraA03t15164Z Brassica rapa HOM05D001921 ORTHO05D001784 3.2e-06 55.8 141 35.5
Carub.0006s3519 Capsella rubella HOM05D001921 ORTHO05D001784 3.2e-06 55.8 118 36.4
DCAR_017895 Daucus carota HOM05D001921 ORTHO05D001784 3.2e-06 55.8 137 32.8
Duzib187G0974 Durio zibethinus HOM05D001921 ORTHO05D001784 3.2e-06 55.8 134 34.3
Gohir.D10G163601 Gossypium hirsutum HOM05D001921 ORTHO05D001784 3.2e-06 55.8 158 29.7
Sp6g01920 Schrenkiella parvula HOM05D001921 ORTHO05D001784 3.2e-06 55.8 128 35.2
ATR0580G129 Amborella trichopoda HOM05D001921 ORTHO05D001784 4.2e-06 55.5 156 30.8
BcaB01g02085 Brassica carinata HOM05D001921 ORTHO05D001784 4.2e-06 55.5 146 32.2
VMungo0540G1436 Vigna mungo HOM05D001921 ORTHO05D001784 4.2e-06 55.5 145 33.1
Prupe.1G486800 Prunus persica HOM05D001921 ORTHO05D001784 5.5e-06 55.1 154 31.2
Cfa013096 Carpinus fangiana HOM05D001921 ORTHO05D001784 7.2e-06 54.7 121 33.9
Gohir.D07G034600 Gossypium hirsutum HOM05D001921 ORTHO05D001784 7.2e-06 54.7 132 34.8
Nitab4.5_0002992g0090 Nicotiana tabacum HOM05D001921 ORTHO05D001784 7.2e-06 54.7 145 34.5
COL.COLO4_18922 Corchorus olitorius HOM05D001921 ORTHO05D001784 9.4e-06 54.3 132 32.6
Gorai.001G036300 Gossypium raimondii HOM05D001921 ORTHO05D001784 9.4e-06 54.3 133 34.6
Oeu012641.1 Olea europaea HOM05D001921 ORTHO05D001784 9.4e-06 54.3 141 34.8
Sabra06G0203000 Salix brachista HOM05D001921 ORTHO05D001784 9.4e-06 54.3 153 33.3
SabraUnG0005100 Salix brachista HOM05D001921 ORTHO05D001784 9.4e-06 54.3 153 33.3
VMungo1309G0884 Vigna mungo HOM05D001921 ORTHO05D001784 9.4e-06 54.3 86 48.8


User provided reference genes

Program Settings