Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 1.0e-94 350.1 190 100.0
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 1.2e-77 293.5 204 79.4
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 2.3e-73 279.3 200 80.5
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 1.1e-72 276.9 201 79.6
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 2.9e-36 156.0 206 52.4
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 2.5e-35 152.9 201 48.3
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 3.2e-35 152.5 198 48.5
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 2.1e-34 149.8 194 51.5
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 2.7e-34 149.4 207 54.1
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 7.9e-34 147.9 196 49.0
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 1.8e-33 146.7 203 46.8
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 2.3e-33 146.4 197 49.7
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 6.7e-33 144.8 223 46.2
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 8.7e-33 144.4 203 47.8
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 2.5e-32 142.9 209 53.6
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 4.3e-32 142.1 199 47.2
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 5.7e-32 141.7 203 49.8
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 7.4e-32 141.4 201 46.3
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 9.6e-32 141.0 202 49.0
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 1.3e-31 140.6 203 46.3
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 1.3e-31 140.6 212 47.6
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 2.8e-31 139.4 195 51.8
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 6.3e-31 138.3 209 47.4
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 9.0e-30 134.4 197 46.2
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 1.2e-29 134.0 210 45.2
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 1.2e-29 134.0 214 50.9
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 3.4e-29 132.5 202 45.5
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 3.4e-29 132.5 195 48.2
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 5.9e-29 131.7 211 49.3
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 1.0e-28 131.0 202 45.0
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 1.3e-28 130.6 200 46.5
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 2.9e-28 129.4 207 49.8
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 5.0e-28 128.6 227 42.7
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 6.5e-28 128.3 206 47.1
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 8.4e-28 127.9 205 47.3
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.1e-27 127.5 204 48.0
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 1.4e-27 127.1 204 43.6
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 1.4e-27 127.1 204 43.6
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 1.9e-27 126.7 207 49.3
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 2.5e-27 126.3 204 47.5
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 2.5e-27 126.3 214 45.8
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 2.5e-27 126.3 202 44.6
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 3.2e-27 125.9 212 44.8
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 5.5e-27 125.2 204 50.5
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 7.2e-27 124.8 193 47.2
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 1.6e-26 123.6 199 47.2
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 2.7e-26 122.9 205 42.0
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 2.7e-26 122.9 197 48.7
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 3.5e-26 122.5 198 41.4
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 3.5e-26 122.5 215 45.6
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 4.6e-26 122.1 194 45.4
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 4.6e-26 122.1 195 42.1
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 1.0e-25 120.9 206 47.1
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.0e-25 120.9 202 48.0
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 1.0e-25 120.9 199 50.8
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 1.8e-25 120.2 194 51.0
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 2.3e-25 119.8 199 50.8
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.9e-25 119.0 206 48.5
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 3.9e-25 119.0 195 45.1
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 5.1e-25 118.6 208 44.2
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 6.7e-25 118.2 200 42.0
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 8.7e-25 117.9 209 44.0
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 1.1e-24 117.5 200 42.0
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 1.1e-24 117.5 200 42.0
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 1.1e-24 117.5 201 40.8
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.5e-24 117.1 203 48.3
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 1.5e-24 117.1 190 45.8
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 1.9e-24 116.7 200 42.0
arahy.Tifrunner.gnm1.ann1.R9ZCFD Arachis hypogaea HOM05D003644 ORTHO05D004305 2.5e-24 116.3 166 54.2
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 3.3e-24 115.9 210 44.8
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 3.3e-24 115.9 205 42.0
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 4.3e-24 115.5 214 46.7
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 4.3e-24 115.5 198 44.9
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 5.7e-24 115.2 204 47.1
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 7.4e-24 114.8 195 44.6
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 1.6e-23 113.6 210 44.8
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 1.6e-23 113.6 204 43.6
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 1.6e-23 113.6 201 40.3
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 2.2e-23 113.2 214 43.5
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 3.7e-23 112.5 163 48.5
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 8.2e-23 111.3 210 41.9
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 1.1e-22 110.9 200 41.0
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 1.1e-22 110.9 203 44.3
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 1.4e-22 110.5 166 45.2
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.4e-22 109.8 179 45.8
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 4.1e-22 109.0 197 40.6
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 5.3e-22 108.6 200 41.0
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 5.3e-22 108.6 169 43.8
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 5.3e-22 108.6 197 40.6
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 5.3e-22 108.6 197 40.6
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 5.3e-22 108.6 195 46.2
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 6.9e-22 108.2 148 49.3
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 9.0e-22 107.8 199 41.7
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.2e-21 107.5 208 42.8
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 1.5e-21 107.1 199 43.7
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 2.6e-21 106.3 207 43.5
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 3.4e-21 105.9 197 40.1
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 3.4e-21 105.9 197 40.1
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 3.4e-21 105.9 202 40.1
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 4.5e-21 105.5 162 45.7
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 5.9e-21 105.1 205 39.0
Lalb_Chr05g0223051 Lupinus albus HOM05D003644 ORTHO05D004305 7.7e-21 104.8 160 50.6
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 1.0e-20 104.4 204 43.6
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 1.3e-20 104.0 204 40.7
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 1.7e-20 103.6 192 42.2
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 2.9e-20 102.8 200 41.5
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 2.9e-20 102.8 200 41.5
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 2.9e-20 102.8 193 40.4
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 3.8e-20 102.4 205 41.0
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 5.0e-20 102.1 204 43.1
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 5.0e-20 102.1 200 38.0
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 1.1e-19 100.9 200 41.0
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 5.5e-19 98.6 207 41.5
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 1.2e-18 97.4 170 42.9
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 1.2e-18 97.4 158 47.5
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 1.6e-18 97.1 201 38.8
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 2.1e-18 96.7 134 47.8
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 2.1e-18 96.7 192 44.3
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 6.1e-18 95.1 132 48.5
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 1.4e-17 94.0 202 37.1
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 1.1e-16 90.9 209 43.1
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 3.3e-16 89.4 214 38.8
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 9.7e-16 87.8 198 43.4
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 9.7e-16 87.8 194 36.6
Nitab4.5_0014820g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 1.3e-15 87.4 139 43.9
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 1.3e-15 87.4 208 42.8
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 2.2e-15 86.7 175 37.1
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 2.8e-15 86.3 168 36.3
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 8.2e-15 84.7 120 49.2
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 1.8e-14 83.6 209 40.7
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 1.8e-14 83.6 168 39.3
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 1.8e-14 83.6 178 39.3
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 2.4e-14 83.2 149 42.3
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 4.1e-14 82.4 171 38.6
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 5.3e-14 82.0 180 40.6
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 6.9e-14 81.6 135 44.4
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 9.1e-14 81.3 196 40.3
TPR.G23503 Trifolium pratense HOM05D003644 ORTHO05D004305 9.1e-14 81.3 162 42.0
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 2.6e-13 79.7 173 38.7
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 2.6e-13 79.7 173 38.7
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 1.0e-12 77.8 195 37.4
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 1.7e-12 77.0 165 38.2
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 2.2e-12 76.6 205 35.1
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 3.8e-12 75.9 192 40.6
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 1.4e-11 73.9 195 34.9
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 1.9e-11 73.6 197 37.1
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 1.9e-11 73.6 194 31.4
Solyc12g007240.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 2.5e-11 73.2 132 42.4
Solyc07g018370.3 Solanum lycopersicum HOM05D003644 ORTHO05D004305 4.2e-11 72.4 115 44.3
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 5.5e-11 72.0 184 33.2
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 1.6e-10 70.5 196 32.7
Lalb_Chr16g0388081 Lupinus albus HOM05D003644 ORTHO05D004305 2.1e-10 70.1 135 39.3
Nitab4.5_0002431g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 2.1e-10 70.1 91 49.5
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 3.6e-10 69.3 191 37.2
COL.COLO4_17464 Corchorus olitorius HOM05D003644 ORTHO05D004305 4.7e-10 68.9 163 38.7
AL7G23640 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 5.1e-09 65.5 123 42.3
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 5.1e-09 65.5 115 40.9
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 1.5e-08 63.9 113 40.7
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 1.5e-08 63.9 193 34.2
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 3.3e-08 62.8 200 32.5
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 1.3e-07 60.8 146 36.3
Rhsim05G0043500 Rhododendron simsii HOM05D003644 ORTHO05D004305 3.7e-07 59.3 116 38.8
BraA09t36915Z Brassica rapa HOM05D003644 ORTHO05D004305 4.8e-07 58.9 168 32.7
Sc08g0007700 Simmondsia chinensis HOM05D003644 ORTHO05D004305 8.2e-07 58.2 161 34.8
Lsat_1_v5_gn_5_147641 Lactuca sativa HOM05D003644 ORTHO05D004305 1.4e-06 57.4 127 48.0
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 1.8e-06 57.0 189 33.3
Zm00001eb156860 Zea mays HOM05D003644 ORTHO05D004305 4.1e-06 55.8 171 34.5
Psat7g014640 Pisum sativum HOM05D003644 ORTHO05D004305 5.3e-06 55.5 159 35.2


User provided reference genes

Program Settings