Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013135 Sechium edule HOM05D004784 ORTHO05D005762 2.2e-238 828.6 408 100.0
ClCG03G004610 Citrullus lanatus HOM05D004784 ORTHO05D005762 5.7e-231 803.9 408 95.6
Sed0006727 Sechium edule HOM05D004784 ORTHO05D005762 1.3e-230 802.7 408 95.8
CsaV3_1G010620 Cucumis sativus L. HOM05D004784 ORTHO05D005762 4.5e-228 794.3 408 94.4
MELO3C002444.2 Cucumis melo HOM05D004784 ORTHO05D005762 2.2e-227 792.0 408 94.1
RcHm_v2.0_Chr5g0002651 Rosa chinensis HOM05D004784 ORTHO05D005762 8.8e-224 780.0 406 92.1
FvH4_3g01820 Fragaria vesca HOM05D004784 ORTHO05D005762 5.7e-223 777.3 406 91.9
FAN25G0478 Fragaria x ananassa HOM05D004784 ORTHO05D005762 9.7e-223 776.5 406 91.9
FAN21G1227 Fragaria x ananassa HOM05D004784 ORTHO05D005762 2.8e-222 775.0 406 91.6
Thecc.06G223500 Theobroma cacao HOM05D004784 ORTHO05D005762 2.8e-222 775.0 408 91.7
Prupe.4G018500 Prunus persica HOM05D004784 ORTHO05D005762 4.8e-222 774.2 409 91.4
COL.COLO4_31797 Corchorus olitorius HOM05D004784 ORTHO05D005762 1.1e-221 773.1 408 91.2
Gorai.010G181500 Gossypium raimondii HOM05D004784 ORTHO05D005762 3.1e-221 771.5 408 91.2
Gohir.A06G149200 Gossypium hirsutum HOM05D004784 ORTHO05D005762 4.1e-221 771.2 408 90.9
Duzib192G0808 Durio zibethinus HOM05D004784 ORTHO05D005762 5.3e-221 770.8 408 91.2
Gohir.D06G155300 Gossypium hirsutum HOM05D004784 ORTHO05D005762 2.6e-220 768.5 408 90.7
Manes.17G025900 Manihot esculenta HOM05D004784 ORTHO05D005762 2.6e-220 768.5 408 90.7
MD10G1323700 Malus domestica HOM05D004784 ORTHO05D005762 3.5e-220 768.1 409 91.0
Hma1.2p1_0091F.1_g046500 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 1.7e-219 765.8 406 90.4
Medtr4g132360 Medicago truncatula HOM05D004784 ORTHO05D005762 2.2e-219 765.4 408 89.7
Cc09_g01490 Coffea canephora HOM05D004784 ORTHO05D005762 2.9e-219 765.0 408 90.0
Peaxi162Scf00131g01117 Petunia axillaris HOM05D004784 ORTHO05D005762 3.8e-219 764.6 407 89.2
QL05p072692 Quercus lobata HOM05D004784 ORTHO05D005762 3.8e-219 764.6 407 90.2
Rhsim13G0152700 Rhododendron simsii HOM05D004784 ORTHO05D005762 5.0e-219 764.2 409 90.7
Lalb_Chr18g0056491 Lupinus albus HOM05D004784 ORTHO05D005762 8.5e-219 763.5 406 89.7
Nitab4.5_0002695g0040 Nicotiana tabacum HOM05D004784 ORTHO05D005762 8.5e-219 763.5 406 89.9
Nitab4.5_0007963g0010 Nicotiana tabacum HOM05D004784 ORTHO05D005762 8.5e-219 763.5 406 89.7
Solyc02g080810.3 Solanum lycopersicum HOM05D004784 ORTHO05D005762 8.5e-219 763.5 406 89.7
Gohir.A05G171500 Gossypium hirsutum HOM05D004784 ORTHO05D005762 1.1e-218 763.1 408 90.0
Gohir.D05G174600 Gossypium hirsutum HOM05D004784 ORTHO05D005762 1.5e-218 762.7 408 90.2
PGSC0003DMG400016444 Solanum tuberosum HOM05D004784 ORTHO05D005762 4.2e-218 761.1 406 89.2
TPR.G37066 Trifolium pratense HOM05D004784 ORTHO05D005762 9.4e-218 760.0 408 88.7
QL02p099920 Quercus lobata HOM05D004784 ORTHO05D005762 1.2e-217 759.6 407 90.4
Sopen02g025500 Solanum pennellii HOM05D004784 ORTHO05D005762 1.2e-217 759.6 406 88.9
vmacro03682 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 2.7e-217 758.4 422 88.2
Haze_06821 Corylus avellana HOM05D004784 ORTHO05D005762 3.6e-217 758.1 406 89.9
VMungo1215G1817 Vigna mungo HOM05D004784 ORTHO05D005762 3.6e-217 758.1 408 89.7
Glyma.07G262100 Glycine max HOM05D004784 ORTHO05D005762 4.7e-217 757.7 408 89.2
Lalb_Chr15g0087671 Lupinus albus HOM05D004784 ORTHO05D005762 6.1e-217 757.3 406 89.2
Phvul.003G080400 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 6.1e-217 757.3 408 89.0
CANSAT56G2555 Cannabis sativa HOM05D004784 ORTHO05D005762 8.0e-217 756.9 408 88.7
Glyma.17G012000 Glycine max HOM05D004784 ORTHO05D005762 1.0e-216 756.5 408 89.2
Potri.004G009600 Populus trichocarpa HOM05D004784 ORTHO05D005762 1.0e-216 756.5 406 89.7
Cfa000202 Carpinus fangiana HOM05D004784 ORTHO05D005762 1.4e-216 756.1 406 89.7
Ca_21072_v3 Cicer arietinum L. HOM05D004784 ORTHO05D005762 1.4e-216 756.1 408 88.5
CAN.G1014.12 Capsicum annuum HOM05D004784 ORTHO05D005762 1.8e-216 755.7 406 89.2
Lj6g0010262 Lotus japonicus HOM05D004784 ORTHO05D005762 1.8e-216 755.7 408 88.7
Lj1A1232G87 Lonicera japonica HOM05D004784 ORTHO05D005762 2.3e-216 755.4 404 88.9
Potri.011G006800 Populus trichocarpa HOM05D004784 ORTHO05D005762 3.0e-216 755.0 406 89.7
Hma1.2p1_0298F.1_g117720 Hydrangea macrophylla HOM05D004784 ORTHO05D005762 4.0e-216 754.6 405 89.1
CiPaw.09G093700 Carya illinoinensis HOM05D004784 ORTHO05D005762 6.7e-216 753.8 406 89.2
Sabra11G0005900 Salix brachista HOM05D004784 ORTHO05D005762 1.2e-215 753.1 406 89.4
TAR629G2745 Trochodendron aralioides HOM05D004784 ORTHO05D005762 1.2e-215 753.1 406 89.4
TWI38G1114 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 1.5e-215 752.7 406 89.4
Glyma.09G004700 Glycine max HOM05D004784 ORTHO05D005762 2.0e-215 752.3 408 87.7
arahy.Tifrunner.gnm1.ann1.EH8QHL Arachis hypogaea HOM05D004784 ORTHO05D005762 2.6e-215 751.9 408 88.2
SalBow8G0639 Salvia bowleyana HOM05D004784 ORTHO05D005762 2.6e-215 751.9 406 88.9
Dinv13913 Davidia involucrata HOM05D004784 ORTHO05D005762 9.7e-215 750.0 406 88.9
TWI63G0560 Tripterygium wilfordii HOM05D004784 ORTHO05D005762 1.3e-214 749.6 406 88.7
Atru.chr10.2254 Acer truncatum HOM05D004784 ORTHO05D005762 2.2e-214 748.8 406 88.7
Eucgr.L02773 Eucalyptus grandis HOM05D004784 ORTHO05D005762 3.7e-214 748.0 406 88.2
Psat4g005920 Pisum sativum HOM05D004784 ORTHO05D005762 4.8e-214 747.7 409 88.3
CiPaw.10G073000 Carya illinoinensis HOM05D004784 ORTHO05D005762 6.3e-214 747.3 406 88.4
Dinv20065 Davidia involucrata HOM05D004784 ORTHO05D005762 1.1e-213 746.5 403 88.6
AL1G23030 Arabidopsis lyrata HOM05D004784 ORTHO05D005762 1.4e-213 746.1 409 87.8
PGR142G1596 Punica granatum HOM05D004784 ORTHO05D005762 4.1e-213 744.6 408 88.5
Oeu013835.1 Olea europaea HOM05D004784 ORTHO05D005762 7.0e-213 743.8 406 87.2
RhsimUnG0232700 Rhododendron simsii HOM05D004784 ORTHO05D005762 9.1e-213 743.4 452 82.1
AT1G11860 Arabidopsis thaliana HOM05D004784 ORTHO05D005762 1.2e-212 743.0 409 87.3
Thhalv10007781m.g Eutrema salsugineum HOM05D004784 ORTHO05D005762 1.2e-212 743.0 409 87.5
DCAR_008168 Daucus carota HOM05D004784 ORTHO05D005762 2.0e-212 742.3 421 86.2
CARHR012170 Cardamine hirsuta HOM05D004784 ORTHO05D005762 2.7e-212 741.9 409 87.0
Glyma.15G109300 Glycine max HOM05D004784 ORTHO05D005762 2.7e-212 741.9 408 86.5
Carub.0001s1151 Capsella rubella HOM05D004784 ORTHO05D005762 4.5e-212 741.1 409 87.3
MSTRG.7197 Avicennia marina HOM05D004784 ORTHO05D005762 5.9e-212 740.7 406 86.9
THA.LOC104809494 Tarenaya hassleriana HOM05D004784 ORTHO05D005762 7.7e-212 740.3 409 87.3
Sp1g10470 Schrenkiella parvula HOM05D004784 ORTHO05D005762 1.0e-211 740.0 409 86.8
unitig_92.g28113 Utricularia gibba HOM05D004784 ORTHO05D005762 1.0e-211 740.0 408 87.5
MBI02_g15378_MAGBIO Magnolia biondii HOM05D004784 ORTHO05D005762 1.3e-211 739.6 410 87.6
Aa31LG1G2870 Aethionema arabicum HOM05D004784 ORTHO05D005762 1.7e-211 739.2 409 86.8
vmacro22539 Vaccinium macrocarpon HOM05D004784 ORTHO05D005762 1.7e-211 739.2 473 78.9
A09p64310 Brassica napus HOM05D004784 ORTHO05D005762 2.2e-211 738.8 409 87.0
BraA09t41774Z Brassica rapa HOM05D004784 ORTHO05D005762 2.2e-211 738.8 409 87.0
Aqoxy1G03119 Aquilegia oxysepala HOM05D004784 ORTHO05D005762 3.8e-211 738.0 406 86.2
Oeu002744.1 Olea europaea HOM05D004784 ORTHO05D005762 3.8e-211 738.0 406 86.9
C08p47920 Brassica napus HOM05D004784 ORTHO05D005762 5.0e-211 737.6 409 87.0
Migut.M01336 Erythranthe guttata HOM05D004784 ORTHO05D005762 5.0e-211 737.6 407 86.2
BolC8t52329H Brassica oleracea HOM05D004784 ORTHO05D005762 6.5e-211 737.3 409 86.8
arahy.Tifrunner.gnm1.ann1.PLZ2LX Arachis hypogaea HOM05D004784 ORTHO05D005762 2.5e-210 735.3 398 88.4
Ciclev10015433m.g Citrus clementina HOM05D004784 ORTHO05D005762 2.5e-210 735.3 410 87.3
Phvul.006G148700 Phaseolus vulgaris HOM05D004784 ORTHO05D005762 2.5e-210 735.3 408 85.8
Nn1g03473 Nelumbo nucifera HOM05D004784 ORTHO05D005762 4.2e-210 734.6 450 80.9
BraA08t35239Z Brassica rapa HOM05D004784 ORTHO05D005762 7.2e-210 733.8 410 87.1
Hund23455 Selenicereus undatus HOM05D004784 ORTHO05D005762 1.2e-209 733.0 406 86.2
Hund21422 Selenicereus undatus HOM05D004784 ORTHO05D005762 1.6e-209 732.6 406 86.0
C08p14960 Brassica napus HOM05D004784 ORTHO05D005762 2.1e-209 732.3 410 86.3
BolC8t49127H Brassica oleracea HOM05D004784 ORTHO05D005762 2.1e-209 732.3 410 86.3
Ah.09g234740 Amaranthus hybridus HOM05D004784 ORTHO05D005762 4.7e-209 731.1 409 85.3
PSO541G3045 Papaver somniferum HOM05D004784 ORTHO05D005762 1.0e-208 729.9 407 85.7
PSO675G1799 Papaver somniferum HOM05D004784 ORTHO05D005762 1.4e-208 729.6 407 85.7
Ah.14g087950 Amaranthus hybridus HOM05D004784 ORTHO05D005762 5.2e-208 727.6 406 85.0
AUR62022970 Chenopodium quinoa HOM05D004784 ORTHO05D005762 1.2e-207 726.5 408 85.0
AUR62012328 Chenopodium quinoa HOM05D004784 ORTHO05D005762 1.5e-207 726.1 408 84.6
CDE05G1701 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 2.0e-207 725.7 408 85.5
Sc24g0000220 Simmondsia chinensis HOM05D004784 ORTHO05D005762 9.8e-207 723.4 406 85.0
SGA_v2.0_scaffold7G03812 Striga asiatica HOM05D004784 ORTHO05D005762 1.7e-206 722.6 433 81.8
CDE02G4424 Ceratophyllum demersum HOM05D004784 ORTHO05D005762 6.3e-206 720.7 408 85.5
Sc05g0009310 Simmondsia chinensis HOM05D004784 ORTHO05D005762 6.3e-206 720.7 407 84.5
MSTRG.14637 Avicennia marina HOM05D004784 ORTHO05D005762 2.4e-205 718.8 409 83.1
Gorai.009G179900 Gossypium raimondii HOM05D004784 ORTHO05D005762 2.7e-204 715.3 383 90.3
Sabra04G0005000 Salix brachista HOM05D004784 ORTHO05D005762 3.8e-203 711.4 382 89.3
EL10Ac6g15683 Beta vulgaris HOM05D004784 ORTHO05D005762 2.1e-201 705.7 449 76.8
Nn030s41595 Nelumbo nucifera HOM05D004784 ORTHO05D005762 3.6e-201 704.9 379 89.7
Lsat_1_v5_gn_7_16480 Lactuca sativa HOM05D004784 ORTHO05D005762 1.0e-200 703.4 388 87.1
ATR0794G107 Amborella trichopoda HOM05D004784 ORTHO05D005762 2.4e-197 692.2 417 81.8
A08p33210 Brassica napus HOM05D004784 ORTHO05D005762 2.4e-197 692.2 410 83.4
Oeu040336.3 Olea europaea HOM05D004784 ORTHO05D005762 3.1e-197 691.8 517 69.1
GSVIVG01012702001 Vitis vinifera HOM05D004784 ORTHO05D005762 5.0e-195 684.5 358 92.2
HPP92_004130 Vanilla planifolia HOM05D004784 ORTHO05D005762 1.5e-194 682.9 410 80.2
HanXRQChr15g0470421 Helianthus annuus HOM05D004784 ORTHO05D005762 2.0e-191 672.5 356 89.9
SEGI_27497 Sequoiadendron giganteum HOM05D004784 ORTHO05D005762 3.2e-189 665.2 409 77.3
Os04g0623800 Oryza sativa ssp. japonica HOM05D004784 ORTHO05D005762 5.4e-189 664.5 379 82.8
Zm00001eb070250 Zea mays HOM05D004784 ORTHO05D005762 2.7e-188 662.1 379 82.6
ECA236G1893 Erigeron canadensis HOM05D004784 ORTHO05D005762 3.0e-187 658.7 408 80.1
BcaB03g13227 Brassica carinata HOM05D004784 ORTHO05D005762 1.1e-186 656.8 358 87.7
Pp3c4_15010 Physcomitrium patens HOM05D004784 ORTHO05D005762 3.3e-178 628.6 412 72.8
Pp3c12_9500 Physcomitrium patens HOM05D004784 ORTHO05D005762 1.1e-176 623.6 410 72.7
AagrBONN_evm.TU.Sc2ySwM_344.1952 Anthoceros agrestis HOM05D004784 ORTHO05D005762 1.7e-174 616.3 406 73.9
Mapoly0129s0024 Marchantia polymorpha HOM05D004784 ORTHO05D005762 6.0e-172 607.8 405 70.6
TAR627G1106 Trochodendron aralioides HOM05D004784 ORTHO05D005762 9.9e-167 590.5 317 89.0
SMO352G0047 Selaginella moellendorffii HOM05D004784 ORTHO05D005762 1.1e-165 587.0 400 70.8
CSS0014504 Camellia sinensis var. sinensis HOM05D004784 ORTHO05D005762 1.5e-154 550.1 389 72.0
A06p08340 Brassica napus HOM05D004784 ORTHO05D005762 9.6e-154 547.4 409 68.9
TAR626G0807 Trochodendron aralioides HOM05D004784 ORTHO05D005762 3.5e-148 528.9 298 85.2
Actinidia26902 Actinidia chinensis HOM05D004784 ORTHO05D005762 9.6e-146 520.8 310 83.9
Cre03.g193750 Chlamydomonas reinhardtii HOM05D004784 ORTHO05D005762 5.3e-144 515.0 400 63.5
Atru.chr8.533 Acer truncatum HOM05D004784 ORTHO05D005762 5.3e-128 461.8 255 85.9
Eucgr.E03909 Eucalyptus grandis HOM05D004784 ORTHO05D005762 7.7e-127 458.0 245 89.4
PRCOL_00007041 Prasinoderma coloniale HOM05D004784 ORTHO05D005762 8.5e-126 454.5 368 62.2
MD05G1348800 Malus domestica HOM05D004784 ORTHO05D005762 2.8e-121 439.5 238 89.1
MCO15G045 Micromonas commoda HOM05D004784 ORTHO05D005762 2.9e-118 429.5 385 56.1
Lalb_Chr20g0118761 Lupinus albus HOM05D004784 ORTHO05D005762 1.2e-116 424.1 227 87.7
BraA06t24032Z Brassica rapa HOM05D000911 ORTHO05D001266 6.1e-108 395.2 239 80.3
Cpa.g.sc152.29 Carica papaya HOM05D004784 ORTHO05D005762 4.4e-98 362.5 197 88.3
Cfa026602 Carpinus fangiana HOM05D004784 ORTHO05D005762 9.8e-82 308.1 404 44.8
Haze_26660 Corylus avellana HOM05D004784 ORTHO05D005762 4.7e-76 289.3 390 44.4
CBR_g24348 Chara braunii HOM05D004784 ORTHO05D005762 1.0e-70 271.6 180 75.0
Sopen07g011340 Solanum pennellii HOM05D004784 ORTHO05D005762 2.8e-68 263.5 180 71.1
EL10Ac1g01135 Beta vulgaris HOM05D004784 ORTHO05D005762 2.3e-59 233.8 141 77.3
EL10Ac2g03767 Beta vulgaris HOM05D004784 ORTHO05D005762 4.0e-59 233.0 140 77.9
Atru.chr8.531 Acer truncatum HOM05D004784 ORTHO05D005762 1.4e-56 224.6 124 87.1
Actinidia05506 Actinidia chinensis HOM05D004784 ORTHO05D005762 1.9e-48 197.6 104 91.3
Actinidia15969 Actinidia chinensis HOM05D004784 ORTHO05D058202 1.5e-21 108.2 128 49.2
Actinidia11861 Actinidia chinensis HOM05D004784 ORTHO05D005762 1.4e-19 101.7 58 74.1
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 9.0e-11 72.4 318 23.6
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 1.7e-09 68.2 325 22.5


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