Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012968 Sechium edule HOM05D007067 ORTHO05D008864 7.8e-100 367.1 180 100.0
ClCG06G016120 Citrullus lanatus HOM05D007067 ORTHO05D008864 4.8e-81 304.7 180 83.9
MELO3C017182.2 Cucumis melo HOM05D007067 ORTHO05D008864 1.3e-78 296.6 180 83.3
CsaV3_1G002440 Cucumis sativus L. HOM05D007067 ORTHO05D008864 1.7e-78 296.2 180 83.3
Manes.06G091000 Manihot esculenta HOM05D007067 ORTHO05D008864 5.3e-64 248.1 186 70.4
Prupe.5G195500 Prunus persica HOM05D007067 ORTHO05D008864 1.0e-62 243.8 182 69.2
GSVIVG01004672001 Vitis vinifera HOM05D007067 ORTHO05D008864 8.5e-62 240.7 182 68.1
GSVIVG01005334001 Vitis vinifera HOM05D007067 ORTHO05D008864 8.5e-62 240.7 182 68.1
TAR622G0622 Trochodendron aralioides HOM05D007067 ORTHO05D008864 1.4e-61 240.0 182 66.5
FAN13G0188 Fragaria x ananassa HOM05D007067 ORTHO05D008864 2.5e-61 239.2 185 66.5
Potri.012G068500 Populus trichocarpa HOM05D007067 ORTHO05D008864 2.5e-61 239.2 182 68.7
Cfa018925 Carpinus fangiana HOM05D007067 ORTHO05D008864 3.2e-61 238.8 181 66.9
FAN08G0270 Fragaria x ananassa HOM05D007067 ORTHO05D008864 7.2e-61 237.7 185 65.9
FAN18G1220 Fragaria x ananassa HOM05D007067 ORTHO05D008864 7.2e-61 237.7 185 66.5
RcHm_v2.0_Chr7g0181701 Rosa chinensis HOM05D007067 ORTHO05D008864 7.2e-61 237.7 185 66.5
MD06G1195600 Malus domestica HOM05D007067 ORTHO05D008864 9.4e-61 237.3 185 67.0
Sabra12G0047100 Salix brachista HOM05D007067 ORTHO05D008864 9.4e-61 237.3 183 68.9
CSS0040643 Camellia sinensis var. sinensis HOM05D007067 ORTHO05D008864 2.1e-60 236.1 181 66.9
CiPaw.11G046200 Carya illinoinensis HOM05D007067 ORTHO05D008864 2.1e-60 236.1 182 67.0
MD14G1202700 Malus domestica HOM05D007067 ORTHO05D008864 2.7e-60 235.7 183 67.8
Nn3g17293 Nelumbo nucifera HOM05D007067 ORTHO05D008864 1.0e-59 233.8 181 64.1
Cc04_g16320 Coffea canephora HOM05D007067 ORTHO05D008864 2.3e-59 232.6 181 65.2
Duzib205G1209 Durio zibethinus HOM05D007067 ORTHO05D008864 3.9e-59 231.9 189 66.7
Thecc.03G091100 Theobroma cacao HOM05D007067 ORTHO05D008864 1.1e-58 230.3 187 66.8
Rhsim08G0153200 Rhododendron simsii HOM05D007067 ORTHO05D008864 2.0e-58 229.6 181 64.1
Actinidia04879 Actinidia chinensis HOM05D007067 ORTHO05D008864 3.3e-58 228.8 187 63.6
Gohir.A03G067300 Gossypium hirsutum HOM05D007067 ORTHO05D008864 3.3e-58 228.8 180 66.7
TWI60G1483 Tripterygium wilfordii HOM05D007067 ORTHO05D008864 9.7e-58 227.3 182 66.5
Gorai.003G097800 Gossypium raimondii HOM05D007067 ORTHO05D008864 2.8e-57 225.7 180 66.1
Gohir.D03G093800 Gossypium hirsutum HOM05D007067 ORTHO05D008864 4.8e-57 224.9 180 66.1
MSTRG.9621 Avicennia marina HOM05D007067 ORTHO05D008864 8.2e-57 224.2 182 63.2
Nitab4.5_0003381g0030 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.1e-56 223.8 181 64.1
Cpa.g.sc111.20 Carica papaya HOM05D007067 ORTHO05D008864 1.4e-56 223.4 180 64.4
Eucgr.K02487 Eucalyptus grandis HOM05D007067 ORTHO05D008864 1.8e-56 223.0 180 63.9
QL10p017305 Quercus lobata HOM05D007067 ORTHO05D008864 3.1e-56 222.2 181 63.0
Migut.D01803 Erythranthe guttata HOM05D007067 ORTHO05D008864 6.9e-56 221.1 182 63.7
vmacro17532 Vaccinium macrocarpon HOM05D007067 ORTHO05D008864 6.9e-56 221.1 181 61.3
Hma1.2p1_0637F.1_g193620 Hydrangea macrophylla HOM05D007067 ORTHO05D008864 1.5e-55 219.9 127 80.3
Nitab4.5_0005226g0040 Nicotiana tabacum HOM05D007067 ORTHO05D008864 1.5e-55 219.9 181 63.0
CANSAT56G4102 Cannabis sativa HOM05D007067 ORTHO05D008864 2.0e-55 219.5 186 60.8
SalBow3G2729 Salvia bowleyana HOM05D007067 ORTHO05D008864 4.5e-55 218.4 179 62.0
CAN.G846.12 Capsicum annuum HOM05D007067 ORTHO05D008864 7.7e-55 217.6 178 62.4
MBI02_g12272_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 7.7e-55 217.6 182 60.4
CDE02G3919 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 1.3e-54 216.9 180 62.8
EL10Ac5g11044 Beta vulgaris HOM05D007067 ORTHO05D008864 3.8e-54 215.3 181 59.7
DCAR_016569 Daucus carota HOM05D007067 ORTHO05D008864 3.8e-54 215.3 184 62.5
PSO832G0421 Papaver somniferum HOM05D007067 ORTHO05D008864 5.0e-54 214.9 128 77.3
HanXRQChr05g0156061 Helianthus annuus HOM05D007067 ORTHO05D008864 6.5e-54 214.5 177 63.3
Lj1g0007284 Lotus japonicus HOM05D007067 ORTHO05D008864 6.5e-54 214.5 181 61.3
PSO063G5395 Papaver somniferum HOM05D007067 ORTHO05D008864 8.5e-54 214.2 183 62.3
Lalb_Chr08g0235641 Lupinus albus HOM05D007067 ORTHO05D008864 1.1e-53 213.8 187 59.4
PGSC0003DMG400021933 Solanum tuberosum HOM05D007067 ORTHO05D008864 1.4e-53 213.4 173 62.4
Atru.chr9.195 Acer truncatum HOM05D007067 ORTHO05D008864 2.5e-53 212.6 181 63.0
Sopen12g016290 Solanum pennellii HOM05D007067 ORTHO05D008864 3.2e-53 212.2 176 62.5
Solyc12g036170.2 Solanum lycopersicum HOM05D007067 ORTHO05D008864 4.2e-53 211.8 176 63.1
AUR62008437 Chenopodium quinoa HOM05D007067 ORTHO05D008864 5.5e-53 211.5 126 79.4
Glyma.04G167400 Glycine max HOM05D007067 ORTHO05D008864 1.2e-52 210.3 182 60.4
Peaxi162Scf00106g00326 Petunia axillaris HOM05D007067 ORTHO05D008864 1.2e-52 210.3 169 63.3
Glyma.06G195200 Glycine max HOM05D007067 ORTHO05D008864 2.1e-52 209.5 182 59.9
Lj5A109T72 Lonicera japonica HOM05D007067 ORTHO05D008864 2.1e-52 209.5 144 70.8
Dinv38731 Davidia involucrata HOM05D007067 ORTHO05D008864 7.9e-52 207.6 179 60.3
ECA246G0430 Erigeron canadensis HOM05D007067 ORTHO05D008864 1.4e-51 206.8 180 60.6
Ca_27682_v3 Cicer arietinum L. HOM05D007067 ORTHO05D008864 1.8e-51 206.5 184 57.6
arahy.Tifrunner.gnm1.ann1.JMB3VF Arachis hypogaea HOM05D007067 ORTHO05D008864 2.3e-51 206.1 180 60.0
arahy.Tifrunner.gnm1.ann1.V8ZK3N Arachis hypogaea HOM05D007067 ORTHO05D008864 2.3e-51 206.1 180 60.0
Phvul.009G186200 Phaseolus vulgaris HOM05D007067 ORTHO05D008864 2.3e-51 206.1 182 58.8
BcaB07g31890 Brassica carinata HOM05D007067 ORTHO05D008864 3.9e-51 205.3 184 60.9
TPR.G11876 Trifolium pratense HOM05D007067 ORTHO05D008864 5.2e-51 204.9 181 59.1
Thhalv10008902m.g Eutrema salsugineum HOM05D007067 ORTHO05D008864 8.8e-51 204.1 183 60.7
Aqoxy3G00483 Aquilegia oxysepala HOM05D007067 ORTHO05D008864 1.1e-50 203.8 182 58.8
Lsat_1_v5_gn_5_20880 Lactuca sativa HOM05D007067 ORTHO05D008864 1.5e-50 203.4 153 68.6
Psat5g201280 Pisum sativum HOM05D007067 ORTHO05D008864 1.5e-50 203.4 181 59.1
Medtr3g435320 Medicago truncatula HOM05D007067 ORTHO05D008864 3.3e-50 202.2 179 59.2
unitig_0.g778 Utricularia gibba HOM05D007067 ORTHO05D008864 5.7e-50 201.4 181 57.5
AT1G18730 Arabidopsis thaliana HOM05D007067 ORTHO05D008864 7.4e-50 201.1 183 60.7
CDE09G1053 Ceratophyllum demersum HOM05D007067 ORTHO05D008864 9.7e-50 200.7 119 77.3
CARHR019370 Cardamine hirsuta HOM05D007067 ORTHO05D008864 1.7e-49 199.9 183 59.0
THA.LOC104808257 Tarenaya hassleriana HOM05D007067 ORTHO05D008864 1.7e-49 199.9 184 58.2
AL1G31200 Arabidopsis lyrata HOM05D007067 ORTHO05D008864 2.8e-49 199.1 184 59.8
C05p17040 Brassica napus HOM05D007067 ORTHO05D008864 1.1e-48 197.2 183 59.0
BolC5t30410H Brassica oleracea HOM05D007067 ORTHO05D008864 1.1e-48 197.2 183 59.0
Carub.0001s1838 Capsella rubella HOM05D007067 ORTHO05D008864 1.1e-48 197.2 181 59.7
Sp1g16740 Schrenkiella parvula HOM05D007067 ORTHO05D008864 1.8e-48 196.4 183 59.0
A06p14840 Brassica napus HOM05D007067 ORTHO05D008864 2.4e-48 196.1 183 58.5
C08p43060 Brassica napus HOM05D007067 ORTHO05D008864 2.4e-48 196.1 131 74.8
BraA06t24606Z Brassica rapa HOM05D007067 ORTHO05D008864 2.4e-48 196.1 183 58.5
BcaB03g14481 Brassica carinata HOM05D007067 ORTHO05D008864 3.1e-48 195.7 167 61.1
Eucgr.K02485 Eucalyptus grandis HOM05D007067 ORTHO05D008864 3.1e-48 195.7 166 60.2
BcaC05g25773 Brassica carinata HOM05D007067 ORTHO05D008864 7.0e-48 194.5 183 59.6
PGR044G1431 Punica granatum HOM05D007067 ORTHO05D008864 9.1e-48 194.1 183 56.8
A09p59720 Brassica napus HOM05D007067 ORTHO05D008864 1.2e-47 193.7 165 63.0
BraA09t41348Z Brassica rapa HOM05D007067 ORTHO05D008864 1.2e-47 193.7 165 63.0
ATR0564G121 Amborella trichopoda HOM05D007067 ORTHO05D008864 4.5e-47 191.8 187 56.1
BolC8t51861H Brassica oleracea HOM05D007067 ORTHO05D008864 5.9e-47 191.4 134 73.1
Peaxi162Scf00106g00037 Petunia axillaris HOM05D007067 ORTHO05D008864 1.3e-46 190.3 111 81.1
MBI02_g23462_MAGBIO Magnolia biondii HOM05D007067 ORTHO05D008864 4.2e-45 185.3 107 77.6
Aa31LG7G3520 Aethionema arabicum HOM05D007067 ORTHO05D008864 1.0e-43 180.6 116 72.4
COL.COLO4_28333 Corchorus olitorius HOM05D007067 ORTHO05D008864 1.4e-40 170.2 184 55.4
AUR62021654 Chenopodium quinoa HOM05D007067 ORTHO05D008864 7.0e-40 167.9 147 57.1
Zm00001eb254450 Zea mays HOM05D007067 ORTHO05D008864 6.5e-38 161.4 141 59.6
Os02g0744000 Oryza sativa ssp. japonica HOM05D007067 ORTHO05D008864 1.1e-37 160.6 125 66.4
BcaC07g41296 Brassica carinata HOM05D007067 ORTHO05D008864 5.9e-31 138.3 118 56.8
SEGI_39094 Sequoiadendron giganteum HOM05D007067 ORTHO05D008864 1.2e-28 130.6 132 51.5
FvH4_5g14690 Fragaria vesca HOM05D007067 ORTHO05D008864 3.6e-28 129.0 124 56.5
Ciclev10022880m.g Citrus clementina HOM05D007067 ORTHO05D008864 4.4e-26 122.1 114 55.3
Rhsim08G0153500 Rhododendron simsii HOM05D007067 ORTHO05D008864 3.7e-25 119.0 175 45.1
CBR_g30507 Chara braunii HOM05D007067 ORTHO05D008864 1.6e-20 103.6 101 51.5
Mapoly0149s0008 Marchantia polymorpha HOM05D007067 ORTHO05D008864 3.0e-19 99.4 101 48.5
Pp3c16_3930 Physcomitrium patens HOM05D007067 ORTHO05D008864 4.4e-18 95.5 80 58.8
Manes.06G090801 Manihot esculenta HOM05D007067 ORTHO05D008864 3.0e-14 82.8 113 49.6
Ah.11g048310 Amaranthus hybridus HOM05D007067 ORTHO05D008864 3.3e-13 79.3 77 54.5
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 8.9e-11 71.2 52 76.9
Haze_07309 Corylus avellana HOM05D007067 ORTHO05D008864 1.7e-09 67.0 181 32.6


User provided reference genes

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