Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011019 Sechium edule HOM05D002746 ORTHO05D003037 1.5e-187 659.4 352 100.0
ClCG08G007860 Citrullus lanatus HOM05D002746 ORTHO05D003037 1.3e-85 320.9 358 58.9
MELO3C019841.2 Cucumis melo HOM05D002746 ORTHO05D003037 3.1e-84 316.2 358 57.3
CsaV3_2G021060 Cucumis sativus L. HOM05D002746 ORTHO05D003037 7.2e-81 305.1 359 54.9
Sed0007948 Sechium edule HOM05D002746 ORTHO05D003037 3.9e-79 299.3 356 54.2
Gorai.010G207300 Gossypium raimondii HOM05D002746 ORTHO05D003037 1.0e-26 125.2 407 30.7
DCAR_019068 Daucus carota HOM05D002746 ORTHO05D003037 2.3e-23 114.0 360 32.2
Prupe.2G206000 Prunus persica HOM05D002746 ORTHO05D003037 1.7e-21 107.8 369 35.5
Haze_16759 Corylus avellana HOM05D002746 ORTHO05D003037 6.4e-21 105.9 417 30.2
COL.COLO4_09863 Corchorus olitorius HOM05D002746 ORTHO05D003037 2.4e-20 104.0 387 29.5
Dinv31245 Davidia involucrata HOM05D002746 ORTHO05D003037 2.3e-18 97.4 374 31.0
Nitab4.5_0000096g0260 Nicotiana tabacum HOM05D002746 ORTHO05D003037 3.9e-18 96.7 354 31.6
MD01G1100300 Malus domestica HOM05D002746 ORTHO05D003037 8.6e-18 95.5 402 30.3
Lalb_Chr21g0312871 Lupinus albus HOM05D002746 ORTHO05D003037 1.5e-17 94.7 364 31.0
Nitab4.5_0002692g0020 Nicotiana tabacum HOM05D002746 ORTHO05D003037 1.5e-17 94.7 367 31.3
TWI63G0026 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 1.5e-17 94.7 365 32.6
Dinv36375 Davidia involucrata HOM05D002746 ORTHO05D003037 3.3e-17 93.6 352 30.4
TWI38G1635 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 8.1e-16 89.0 371 32.6
Gohir.A06G168700 Gossypium hirsutum HOM05D002746 ORTHO05D003037 1.8e-15 87.8 387 30.2
CSS0002034 Camellia sinensis var. sinensis HOM05D002746 ORTHO05D003037 2.6e-14 84.0 355 28.7
MD07G1167400 Malus domestica HOM05D002746 ORTHO05D003037 9.8e-14 82.0 404 30.7
SGA_v2.0_scaffold2G01341 Striga asiatica HOM05D002746 ORTHO05D003037 2.2e-13 80.9 362 31.2
Lj5g0007739 Lotus japonicus HOM05D002746 ORTHO05D003037 3.7e-13 80.1 361 29.6
CiPaw.01G266600 Carya illinoinensis HOM05D002746 ORTHO05D003037 4.9e-13 79.7 128 43.0
Glyma.20G193800 Glycine max HOM05D002746 ORTHO05D003037 8.3e-13 79.0 356 28.1
Gohir.D06G176308 Gossypium hirsutum HOM05D002746 ORTHO05D003037 1.4e-12 78.2 396 27.0
VMungo0720G3138 Vigna mungo HOM05D002746 ORTHO05D003037 1.4e-12 78.2 357 28.6
CiPaw.02G170900 Carya illinoinensis HOM05D002746 ORTHO05D003037 1.9e-12 77.8 155 39.4
Cc02_g10720 Coffea canephora HOM05D002746 ORTHO05D003037 3.2e-12 77.0 358 26.5
RcHm_v2.0_Chr5g0056951 Rosa chinensis HOM05D002746 ORTHO05D003037 3.2e-12 77.0 354 29.1
Actinidia34797 Actinidia chinensis HOM05D001960 ORTHO05D004348 5.4e-12 76.3 129 41.1
FAN25G1769 Fragaria x ananassa HOM05D002746 ORTHO05D003037 7.1e-12 75.9 358 29.1
TAR633G0282 Trochodendron aralioides HOM05D002746 ORTHO05D003037 7.1e-12 75.9 117 46.2
CAN.G694.42 Capsicum annuum HOM05D002746 ORTHO05D003037 1.2e-11 75.1 106 48.1
Lalb_Chr02g0151001 Lupinus albus HOM05D002746 ORTHO05D003037 2.7e-11 73.9 358 27.1
QL01p015272 Quercus lobata HOM05D002746 ORTHO05D003037 2.7e-11 73.9 193 35.8
TAR636G2586 Trochodendron aralioides HOM05D002746 ORTHO05D003037 3.5e-11 73.6 353 27.8
Thecc.10G087200 Theobroma cacao HOM05D002746 ORTHO05D003037 4.6e-11 73.2 365 27.9
Gohir.D05G293300 Gossypium hirsutum HOM05D002746 ORTHO05D003037 6.0e-11 72.8 106 46.2
Hma1.2p1_0117F.1_g056370 Hydrangea macrophylla HOM05D002746 ORTHO05D003037 6.0e-11 72.8 353 28.3
QL08p053342 Quercus lobata HOM05D002746 ORTHO05D003037 6.0e-11 72.8 356 28.1
Lsat_1_v5_gn_9_71621 Lactuca sativa HOM05D002746 ORTHO05D003037 1.0e-10 72.0 124 40.3
vmacro10253 Vaccinium macrocarpon HOM05D002746 ORTHO05D003037 1.0e-10 72.0 372 28.2
Actinidia06732 Actinidia chinensis HOM05D002746 ORTHO05D003037 2.3e-10 70.9 177 35.6
Actinidia18545 Actinidia chinensis HOM05D002746 ORTHO05D003037 2.3e-10 70.9 176 33.5
AT5G04320 Arabidopsis thaliana HOM05D002746 ORTHO05D003037 2.3e-10 70.9 394 27.9
Duzib170G0446 Durio zibethinus HOM05D002746 ORTHO05D003037 2.3e-10 70.9 173 33.5
GSVIVG01016210001 Vitis vinifera HOM05D002746 ORTHO05D003037 2.3e-10 70.9 226 31.9
Lalb_Chr06g0169891 Lupinus albus HOM05D002746 ORTHO05D003037 3.9e-10 70.1 358 27.9
Nn2g13843 Nelumbo nucifera HOM05D002746 ORTHO05D003037 6.6e-10 69.3 353 26.9
Rhsim09G0146600 Rhododendron simsii HOM05D002746 ORTHO05D003037 6.6e-10 69.3 356 29.5
FAN21G0473 Fragaria x ananassa HOM05D002746 ORTHO05D003037 8.6e-10 68.9 356 28.7
Glyma.10G196400 Glycine max HOM05D002746 ORTHO05D003037 8.6e-10 68.9 357 28.3
vmacro14395 Vaccinium macrocarpon HOM05D002746 ORTHO05D003037 8.6e-10 68.9 175 33.1
TPR.G37751 Trifolium pratense HOM05D002746 ORTHO05D003037 1.1e-09 68.6 198 32.3
FAN16G2248 Fragaria x ananassa HOM05D002746 ORTHO05D003037 1.5e-09 68.2 366 27.9
arahy.Tifrunner.gnm1.ann1.89MG53 Arachis hypogaea HOM05D002746 ORTHO05D003037 3.3e-09 67.0 357 26.6
Sabra10G0177700 Salix brachista HOM05D002746 ORTHO05D003037 3.3e-09 67.0 117 41.9
FvH4_3g30760 Fragaria vesca HOM05D002746 ORTHO05D003037 4.3e-09 66.6 363 27.8
FAN11G2794 Fragaria x ananassa HOM05D002746 ORTHO05D003037 4.3e-09 66.6 363 27.8
Medtr1g090657 Medicago truncatula HOM05D002746 ORTHO05D003037 5.6e-09 66.2 191 32.5
Thecc.09G350400 Theobroma cacao HOM05D002746 ORTHO05D003037 5.6e-09 66.2 167 34.7
Cpa.g.sc53.153 Carica papaya HOM05D002746 ORTHO05D003037 7.3e-09 65.9 115 38.3
PGR142G3471 Punica granatum HOM05D002746 ORTHO05D003037 7.3e-09 65.9 151 36.4
arahy.Tifrunner.gnm1.ann1.NH0M87 Arachis hypogaea HOM05D002746 ORTHO05D003037 9.5e-09 65.5 230 29.6
Eucgr.B03933 Eucalyptus grandis HOM05D002746 ORTHO05D003037 9.5e-09 65.5 184 37.0
ECA232G1997 Erigeron canadensis HOM05D002746 ORTHO05D003037 1.6e-08 64.7 137 38.0
GSVIVG01031478001 Vitis vinifera HOM05D002746 ORTHO05D003037 1.6e-08 64.7 164 35.4
Potri.010G229100 Populus trichocarpa HOM05D002746 ORTHO05D003037 2.1e-08 64.3 108 45.4
Duzib168G1483 Durio zibethinus HOM05D002746 ORTHO05D003037 2.8e-08 63.9 141 37.6
Sabra09G0003400 Salix brachista HOM05D002746 ORTHO05D003037 2.8e-08 63.9 114 44.7
Actinidia38881 Actinidia chinensis HOM05D000468 ORTHO05D000548 4.7e-08 63.2 86 46.5
Carub.0003s0965 Capsella rubella HOM05D002746 ORTHO05D003037 4.7e-08 63.2 417 24.7
Migut.F01699 Erythranthe guttata HOM05D002746 ORTHO05D003037 4.7e-08 63.2 360 29.2
CDE04G0545 Ceratophyllum demersum HOM05D002746 ORTHO05D003037 8.1e-08 62.4 140 32.9
Gorai.009G309800 Gossypium raimondii HOM05D002746 ORTHO05D003037 8.1e-08 62.4 358 25.7
Lj2A1009T38 Lonicera japonica HOM05D002746 ORTHO05D003037 8.1e-08 62.4 118 40.7
Aqoxy1G01110 Aquilegia oxysepala HOM05D002746 ORTHO05D003037 1.1e-07 62.0 365 25.8
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.4e-07 61.6 173 32.9
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.4e-07 61.6 173 32.9
CSS0033737 Camellia sinensis var. sinensis HOM05D002746 ORTHO05D003037 1.4e-07 61.6 132 36.4
Oeu040984.1 Olea europaea HOM05D002746 ORTHO05D003037 1.4e-07 61.6 107 43.0
PGR119G0855 Punica granatum HOM05D002746 ORTHO05D003037 1.4e-07 61.6 119 40.3
MSTRG.8123 Avicennia marina HOM05D002746 ORTHO05D003037 1.8e-07 61.2 124 38.7
Sc20g0001570 Simmondsia chinensis HOM05D002746 ORTHO05D003037 1.8e-07 61.2 171 33.3
Ciclev10028947m.g Citrus clementina HOM05D002746 ORTHO05D003037 2.3e-07 60.8 131 35.1
THA.LOC104816434 Tarenaya hassleriana HOM05D002746 ORTHO05D003037 2.3e-07 60.8 157 33.8
TAR369G0776 Trochodendron aralioides HOM05D002746 ORTHO05D003037 2.3e-07 60.8 115 43.5
Aa31LG3G3050 Aethionema arabicum HOM05D002746 ORTHO05D003037 4.0e-07 60.1 330 25.8
Duzib150G0085 Durio zibethinus HOM05D002746 ORTHO05D003037 4.0e-07 60.1 115 38.3
AL6G13940 Arabidopsis lyrata HOM05D002746 ORTHO05D003037 5.2e-07 59.7 391 26.9
Gohir.A05G292300 Gossypium hirsutum HOM05D002746 ORTHO05D003037 5.2e-07 59.7 123 41.5
TWI79G0510 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 5.2e-07 59.7 125 36.0
TWI79G0630 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 5.2e-07 59.7 125 36.0
Gohir.D05G107200 Gossypium hirsutum HOM05D002746 ORTHO05D003037 6.8e-07 59.3 107 38.3
Nn6g35239 Nelumbo nucifera HOM05D002746 ORTHO05D003037 6.8e-07 59.3 226 30.1
Atru.chr12.881 Acer truncatum HOM05D002746 ORTHO05D003037 8.9e-07 58.9 353 26.1
Gohir.A05G107100 Gossypium hirsutum HOM05D002746 ORTHO05D003037 8.9e-07 58.9 118 38.1
Haze_23708 Corylus avellana HOM05D002746 ORTHO05D003037 1.5e-06 58.2 116 39.7
Prupe.6G111900 Prunus persica HOM05D002746 ORTHO05D003037 1.5e-06 58.2 108 38.9
Rhsim11G0027700 Rhododendron simsii HOM05D002746 ORTHO05D003037 1.5e-06 58.2 215 31.6
Sabra08G0021500 Salix brachista HOM05D002746 ORTHO05D003037 1.5e-06 58.2 187 28.9
Atru.chr3.3527 Acer truncatum HOM05D002746 ORTHO05D003037 2.0e-06 57.8 351 24.8
DCAR_006399 Daucus carota HOM05D002746 ORTHO05D003037 2.0e-06 57.8 192 29.7
Gorai.009G111300 Gossypium raimondii HOM05D002746 ORTHO05D003037 2.6e-06 57.4 118 38.1
Lsat_1_v5_gn_8_18641 Lactuca sativa HOM05D002746 ORTHO05D003037 2.6e-06 57.4 84 44.0
Potri.004G216000 Populus trichocarpa HOM05D002746 ORTHO05D003037 2.6e-06 57.4 112 39.3
HanXRQChr13g0404481 Helianthus annuus HOM05D002746 ORTHO05D003037 3.4e-06 57.0 165 33.9
Potri.008G032600 Populus trichocarpa HOM05D002746 ORTHO05D003037 3.4e-06 57.0 107 39.3
MSTRG.9139 Avicennia marina HOM05D002746 ORTHO05D003037 4.4e-06 56.6 169 33.1
Oeu046646.1 Olea europaea HOM05D002746 ORTHO05D003037 4.4e-06 56.6 124 38.7
Cfa010292 Carpinus fangiana HOM05D002746 ORTHO05D003037 5.8e-06 56.2 170 32.9
FAN10G1392 Fragaria x ananassa HOM05D002746 ORTHO05D003037 7.6e-06 55.8 125 31.2
Manes.11G151800 Manihot esculenta HOM05D002746 ORTHO05D003037 7.6e-06 55.8 98 43.9


User provided reference genes

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