Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011013 Sechium edule HOM05D005599 ORTHO05D006921 5.5e-62 240.7 117 100.0
Sed0017153 Sechium edule HOM05D005599 ORTHO05D006921 9.1e-49 196.8 105 89.5
ClCG07G006660 Citrullus lanatus HOM05D005599 ORTHO05D006921 2.7e-48 195.3 106 87.7
CsaV3_5G013870 Cucumis sativus L. HOM05D005599 ORTHO05D006921 5.9e-48 194.1 106 86.8
arahy.Tifrunner.gnm1.ann1.UU8CC3 Arachis hypogaea HOM05D005599 ORTHO05D006921 5.0e-47 191.0 114 78.1
MELO3C018308.2 Cucumis melo HOM05D005599 ORTHO05D006921 6.5e-47 190.7 106 85.8
arahy.Tifrunner.gnm1.ann1.5G098T Arachis hypogaea HOM05D005599 ORTHO05D006921 2.5e-46 188.7 112 78.6
Haze_10995 Corylus avellana HOM05D005599 ORTHO05D006921 1.6e-45 186.0 108 80.6
Gorai.005G161400 Gossypium raimondii HOM05D005599 ORTHO05D006921 2.1e-45 185.7 101 85.1
arahy.Tifrunner.gnm1.ann1.5FG4B2 Arachis hypogaea HOM05D005599 ORTHO05D006921 6.1e-45 184.1 106 81.1
QL01p001565 Quercus lobata HOM05D005599 ORTHO05D006921 6.1e-45 184.1 106 82.1
COL.COLO4_20491 Corchorus olitorius HOM05D005599 ORTHO05D006921 1.0e-44 183.3 99 85.9
Duzib251G0393 Durio zibethinus HOM05D005599 ORTHO05D006921 1.0e-44 183.3 99 85.9
Prupe.1G325600 Prunus persica HOM05D005599 ORTHO05D006921 1.4e-44 183.0 106 81.1
Cpa.g.sc65.146 Carica papaya HOM05D005599 ORTHO05D006921 1.8e-44 182.6 108 77.8
CSS0007655 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 2.3e-44 182.2 107 80.4
CSS0037826 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 2.3e-44 182.2 107 80.4
Gohir.A03G120800 Gossypium hirsutum HOM05D005599 ORTHO05D006921 2.3e-44 182.2 99 84.8
AUR62042684 Chenopodium quinoa HOM05D005599 ORTHO05D006921 4.0e-44 181.4 106 79.2
MD13G1024900 Malus domestica HOM05D005599 ORTHO05D006921 4.0e-44 181.4 99 84.8
Manes.15G128100 Manihot esculenta HOM05D005599 ORTHO05D006921 4.0e-44 181.4 99 83.8
Thecc.02G282300 Theobroma cacao HOM05D005599 ORTHO05D006921 4.0e-44 181.4 99 83.8
Ciclev10017195m.g Citrus clementina HOM05D005599 ORTHO05D006921 5.2e-44 181.0 106 79.2
FvH4_4g19980 Fragaria vesca HOM05D005599 ORTHO05D006921 5.2e-44 181.0 110 77.3
MD16G1027400 Malus domestica HOM05D005599 ORTHO05D006921 5.2e-44 181.0 106 80.2
Phvul.001G094900 Phaseolus vulgaris HOM05D005599 ORTHO05D006921 5.2e-44 181.0 106 79.2
CiPaw.06G011400 Carya illinoinensis HOM05D005599 ORTHO05D006921 6.8e-44 180.6 106 80.2
Hund09673 Selenicereus undatus HOM05D005599 ORTHO05D006921 6.8e-44 180.6 98 83.7
AUR62032768 Chenopodium quinoa HOM05D005599 ORTHO05D006921 8.8e-44 180.3 106 79.2
Cc11_g08600 Coffea canephora HOM05D005599 ORTHO05D006921 1.2e-43 179.9 106 80.2
Gohir.D02G144100 Gossypium hirsutum HOM05D005599 ORTHO05D006921 1.2e-43 179.9 99 83.8
TWI79G1349 Tripterygium wilfordii HOM05D005599 ORTHO05D006921 1.2e-43 179.9 99 83.8
Cfa008617 Carpinus fangiana HOM05D005599 ORTHO05D006921 1.5e-43 179.5 106 80.2
Ah.04g163140 Amaranthus hybridus HOM05D005599 ORTHO05D006921 2.0e-43 179.1 98 81.6
BolC8t52072H Brassica oleracea HOM05D005599 ORTHO05D006921 2.0e-43 179.1 100 82.0
FAN05G3069 Fragaria x ananassa HOM05D005599 ORTHO05D006921 2.6e-43 178.7 106 79.2
FAN12G4015 Fragaria x ananassa HOM05D005599 ORTHO05D006921 2.6e-43 178.7 106 79.2
FAN25G3147 Fragaria x ananassa HOM05D005599 ORTHO05D006921 2.6e-43 178.7 106 79.2
RcHm_v2.0_Chr4g0425701 Rosa chinensis HOM05D005599 ORTHO05D006921 2.6e-43 178.7 106 79.2
CSS0001207 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 3.4e-43 178.3 108 78.7
Atru.chr11.497 Acer truncatum HOM05D005599 ORTHO05D006921 4.4e-43 177.9 98 80.6
Aa31LG2G8490 Aethionema arabicum HOM05D005599 ORTHO05D006921 4.4e-43 177.9 99 81.8
Carub.0001s1476 Capsella rubella HOM05D005599 ORTHO05D006921 4.4e-43 177.9 98 83.7
Lalb_Chr08g0237401 Lupinus albus HOM05D005599 ORTHO05D006921 4.4e-43 177.9 106 80.2
Rhsim09G0066400 Rhododendron simsii HOM05D005599 ORTHO05D006921 4.4e-43 177.9 106 79.2
Sc14g0007100 Simmondsia chinensis HOM05D005599 ORTHO05D006921 4.4e-43 177.9 106 78.3
EL10Ac9g21851 Beta vulgaris HOM05D005599 ORTHO05D006921 5.7e-43 177.6 106 78.3
BraA09t41538Z Brassica rapa HOM05D005599 ORTHO05D006921 5.7e-43 177.6 100 82.0
Peaxi162Scf00253g01125 Petunia axillaris HOM05D005599 ORTHO05D006921 5.7e-43 177.6 99 83.8
Ca_21512_v3 Cicer arietinum L. HOM05D005599 ORTHO05D006921 7.5e-43 177.2 106 77.4
Glyma.16G057902 Glycine max HOM05D005599 ORTHO05D006921 7.5e-43 177.2 106 77.4
Nitab4.5_0000426g0280 Nicotiana tabacum HOM05D005599 ORTHO05D006921 9.8e-43 176.8 99 82.8
Nitab4.5_0004230g0050 Nicotiana tabacum HOM05D005599 ORTHO05D006921 9.8e-43 176.8 99 82.8
Os01g0606050 Oryza sativa ssp. japonica HOM05D005599 ORTHO05D006921 9.8e-43 176.8 106 77.4
TAR622G1178 Trochodendron aralioides HOM05D005599 ORTHO05D006921 9.8e-43 176.8 106 80.2
vmacro00414 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 9.8e-43 176.8 109 77.1
Zm00001eb161570 Zea mays HOM05D005599 ORTHO05D006921 9.8e-43 176.8 106 76.4
AL1G27050 Arabidopsis lyrata HOM05D005599 ORTHO05D006921 1.3e-42 176.4 98 82.7
Thhalv10009435m.g Eutrema salsugineum HOM05D005599 ORTHO05D006921 1.3e-42 176.4 98 82.7
FAN07G1516 Fragaria x ananassa HOM05D005599 ORTHO05D006921 1.7e-42 176.0 106 78.3
Oeu045860.1 Olea europaea HOM05D005599 ORTHO05D006921 1.7e-42 176.0 100 81.0
Glyma.19G089600 Glycine max HOM05D005599 ORTHO05D006921 3.7e-42 174.9 105 76.2
Medtr1g069405 Medicago truncatula HOM05D005599 ORTHO05D006921 3.7e-42 174.9 106 77.4
vmacro14440 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 3.7e-42 174.9 106 79.2
AT1G14990 Arabidopsis thaliana HOM05D005599 ORTHO05D006921 6.3e-42 174.1 98 80.6
A09p61660 Brassica napus HOM05D005599 ORTHO05D006921 6.3e-42 174.1 98 81.6
C08p45240 Brassica napus HOM05D005599 ORTHO05D006921 6.3e-42 174.1 99 80.8
CARHR015530 Cardamine hirsuta HOM05D005599 ORTHO05D006921 6.3e-42 174.1 98 80.6
Sp1g13380 Schrenkiella parvula HOM05D005599 ORTHO05D006921 6.3e-42 174.1 98 81.6
Hma1.2p1_0096F.1_g047800 Hydrangea macrophylla HOM05D005599 ORTHO05D006921 8.3e-42 173.7 106 76.4
Oeu003383.1 Olea europaea HOM05D005599 ORTHO05D006921 8.3e-42 173.7 100 82.0
ATR0796G095 Amborella trichopoda HOM05D005599 ORTHO05D006921 1.1e-41 173.3 104 77.9
Lj6g0000510 Lotus japonicus HOM05D005599 ORTHO05D006921 1.1e-41 173.3 106 77.4
Sabra08G0098500 Salix brachista HOM05D005599 ORTHO05D006921 1.1e-41 173.3 101 77.2
Sabra10G0082600 Salix brachista HOM05D005599 ORTHO05D006921 1.1e-41 173.3 101 77.2
BraA06t24281Z Brassica rapa HOM05D005599 ORTHO05D006921 1.4e-41 172.9 99 81.8
Psat6g049960 Pisum sativum HOM05D005599 ORTHO05D006921 1.4e-41 172.9 106 76.4
Potri.008G129900 Populus trichocarpa HOM05D005599 ORTHO05D006921 1.4e-41 172.9 99 78.8
GSVIVG01011752001 Vitis vinifera HOM05D005599 ORTHO05D006921 1.4e-41 172.9 106 74.5
Dinv14427 Davidia involucrata HOM05D005599 ORTHO05D006921 2.4e-41 172.2 106 76.4
THA.LOC104823847 Tarenaya hassleriana HOM05D005599 ORTHO05D006921 3.1e-41 171.8 99 80.8
TPR.G19139 Trifolium pratense HOM05D005599 ORTHO05D006921 3.1e-41 171.8 106 75.5
A06p11010 Brassica napus HOM05D005599 ORTHO05D006921 4.1e-41 171.4 98 81.6
PGR004G1422 Punica granatum HOM05D005599 ORTHO05D006921 4.1e-41 171.4 106 75.5
CAN.G1244.3 Capsicum annuum HOM05D005599 ORTHO05D006921 5.4e-41 171.0 98 80.6
BcaB02g06563 Brassica carinata HOM05D005599 ORTHO05D006921 7.0e-41 170.6 98 80.6
HPP92_003868 Vanilla planifolia HOM05D005599 ORTHO05D006921 9.1e-41 170.2 106 76.4
HPP92_003899 Vanilla planifolia HOM05D005599 ORTHO05D006921 9.1e-41 170.2 106 76.4
MBI16_g23758_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 1.2e-40 169.9 106 77.4
Potri.010G112300 Populus trichocarpa HOM05D005599 ORTHO05D006921 1.6e-40 169.5 104 74.0
MSTRG.6631 Avicennia marina HOM05D005599 ORTHO05D006921 2.0e-40 169.1 107 76.6
PSO170G3715 Papaver somniferum HOM05D005599 ORTHO05D006921 2.0e-40 169.1 106 76.4
PSO782G0484 Papaver somniferum HOM05D005599 ORTHO05D006921 2.0e-40 169.1 106 76.4
VMungo0464G0261 Vigna mungo HOM05D005599 ORTHO05D006921 2.0e-40 169.1 106 73.6
Solyc04g007700.3 Solanum lycopersicum HOM05D005599 ORTHO05D006921 3.5e-40 168.3 99 77.8
Sopen04g002790 Solanum pennellii HOM05D005599 ORTHO05D006921 3.5e-40 168.3 99 77.8
PGSC0003DMG400005984 Solanum tuberosum HOM05D005599 ORTHO05D006921 3.5e-40 168.3 98 79.6
Eucgr.B01298 Eucalyptus grandis HOM05D005599 ORTHO05D006921 4.5e-40 167.9 99 76.8
BolC5t30050H Brassica oleracea HOM05D005599 ORTHO05D006921 7.7e-40 167.2 98 80.6
DCAR_023596 Daucus carota HOM05D005599 ORTHO05D006921 1.3e-39 166.4 106 70.8
RcHm_v2.0_Chr4g0441361 Rosa chinensis HOM05D005599 ORTHO05D006921 2.3e-39 165.6 114 71.9
DCAR_026778 Daucus carota HOM05D005599 ORTHO05D006921 5.0e-39 164.5 99 73.7
CDE07G0704 Ceratophyllum demersum HOM05D005599 ORTHO05D006921 8.6e-39 163.7 97 79.4
SGA_v2.0_scaffold181G39695 Striga asiatica HOM05D005599 ORTHO05D006921 8.6e-39 163.7 98 76.5
CANSAT11G1373 Cannabis sativa HOM05D005599 ORTHO05D006921 1.5e-38 162.9 106 72.6
BcaC07g38244 Brassica carinata HOM05D005599 ORTHO05D006921 1.9e-38 162.5 99 78.8
C08p09930 Brassica napus HOM05D005599 ORTHO05D006921 1.9e-38 162.5 99 78.8
BolC8t48670H Brassica oleracea HOM05D005599 ORTHO05D006921 1.9e-38 162.5 99 78.8
SGA_v2.0_scaffold154G37132 Striga asiatica HOM05D005599 ORTHO05D006921 1.9e-38 162.5 98 75.5
Aqoxy1G03319 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 5.5e-38 161.0 99 75.8
unitig_899.g15269 Utricularia gibba HOM05D005599 ORTHO05D006921 5.5e-38 161.0 99 75.8
Lsat_1_v5_gn_9_79661 Lactuca sativa HOM05D005599 ORTHO05D006921 7.2e-38 160.6 98 74.5
ECA236G1659 Erigeron canadensis HOM05D005599 ORTHO05D006921 1.2e-37 159.8 98 75.5
Aqoxy3G01068 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 3.6e-37 158.3 99 73.7
HanXRQChr08g0212121 Helianthus annuus HOM05D005599 ORTHO05D006921 4.7e-37 157.9 98 74.5
HanXRQChr12g0364441 Helianthus annuus HOM05D005599 ORTHO05D006921 4.7e-37 157.9 98 74.5
C05p13060 Brassica napus HOM05D005599 ORTHO05D006921 1.4e-36 156.4 106 72.6
Dinv07654 Davidia involucrata HOM05D005599 ORTHO05D006921 1.4e-36 156.4 88 80.7
SGA_v2.0_scaffold6G03128 Striga asiatica HOM05D005599 ORTHO05D006921 2.4e-33 145.6 99 68.7
SEGI_33740 Sequoiadendron giganteum HOM05D005599 ORTHO05D006921 1.2e-32 143.3 99 68.7
arahy.Tifrunner.gnm1.ann1.XM49AS Arachis hypogaea HOM05D005599 ORTHO05D006921 1.7e-31 139.4 74 83.8
AUR62014127 Chenopodium quinoa HOM05D005599 ORTHO05D006921 8.6e-31 137.1 69 88.4
Eucgr.E01608 Eucalyptus grandis HOM05D005599 ORTHO05D006921 4.3e-30 134.8 100 68.0
Migut.M00054 Erythranthe guttata HOM05D005599 ORTHO05D006921 3.6e-29 131.7 108 65.7
Eucgr.B02904 Eucalyptus grandis HOM05D005599 ORTHO05D006921 4.1e-25 118.2 88 63.6
SGA_v2.0_scaffold2G00929 Striga asiatica HOM05D005599 ORTHO05D006921 3.0e-23 112.1 66 77.3
Mapoly0035s0140 Marchantia polymorpha HOM05D005599 ORTHO05D006921 3.9e-23 111.7 103 52.4
Pp3c16_10100 Physcomitrium patens HOM05D005599 ORTHO05D006921 3.9e-23 111.7 100 51.0
Nn4g24251 Nelumbo nucifera HOM05D005599 ORTHO05D006921 8.9e-20 100.5 57 84.2
MBI16_g23757_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 2.2e-18 95.9 68 70.6
BcaC05g25431 Brassica carinata HOM05D005599 ORTHO05D006921 8.3e-18 94.0 98 52.0
MBI16_g23756_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D016475 2.4e-17 92.4 69 68.1
DCAR_032107 Daucus carota HOM05D005599 ORTHO05D006921 1.6e-13 79.7 54 61.1
CBR_g40805 Chara braunii HOM05D005599 ORTHO05D006921 2.1e-13 79.3 65 56.9
SGA_v2.0_scaffold135G34854 Striga asiatica HOM05D005599 ORTHO05D006921 9.9e-11 70.5 43 65.1
QL08p008929 Quercus lobata HOM05D005599 ORTHO05D006921 2.9e-10 68.9 43 72.1


User provided reference genes

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