Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 5.1e-135 484.6 272 100.0
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 2.4e-108 396.0 263 84.8
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 1.6e-104 383.3 263 82.9
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 4.0e-87 325.5 266 71.1
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 1.0e-82 310.8 201 84.6
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 1.3e-82 310.5 252 65.9
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 1.7e-82 310.1 263 69.6
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 2.2e-82 309.7 262 71.0
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 3.8e-82 308.9 252 65.9
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 1.9e-81 306.6 263 68.8
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 1.9e-81 306.6 264 62.5
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 2.5e-81 306.2 263 67.3
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 2.5e-81 306.2 245 72.7
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 2.5e-81 306.2 264 70.5
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 7.2e-81 304.7 249 71.1
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 7.2e-81 304.7 267 66.7
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 6.1e-80 301.6 251 73.7
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 6.1e-80 301.6 252 67.1
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 1.4e-79 300.4 251 71.7
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.8e-79 300.1 248 71.0
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.8e-79 300.1 250 71.2
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 2.3e-79 299.7 268 65.7
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.0e-79 299.3 249 71.1
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.0e-79 298.9 262 62.6
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 5.2e-79 298.5 250 71.2
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 6.8e-79 298.1 252 72.2
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 8.8e-79 297.7 249 68.7
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 1.2e-78 297.4 268 66.8
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 2.6e-78 296.2 253 70.8
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 5.7e-78 295.0 249 72.3
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 1.3e-77 293.9 254 66.5
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 2.2e-77 293.1 267 67.8
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 3.7e-77 292.4 245 67.8
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 3.7e-77 292.4 253 66.0
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 4.8e-77 292.0 269 59.9
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 2.4e-76 289.7 243 65.8
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 7.0e-76 288.1 263 68.4
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 2.7e-75 286.2 248 67.3
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 2.7e-75 286.2 249 66.7
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 7.7e-75 284.6 265 67.2
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.7e-74 283.5 263 65.4
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 2.2e-74 283.1 276 64.5
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 2.9e-74 282.7 253 67.6
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 3.8e-74 282.3 250 68.0
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 5.0e-74 282.0 250 64.8
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 8.5e-74 281.2 248 69.0
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 1.1e-73 280.8 254 67.7
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 1.5e-73 280.4 269 64.3
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 1.5e-73 280.4 251 65.7
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 1.9e-73 280.0 252 66.7
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 1.9e-73 280.0 267 62.9
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 2.5e-73 279.6 251 66.5
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 2.5e-73 279.6 254 66.5
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 2.5e-73 279.6 254 66.5
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 3.2e-73 279.3 250 64.0
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 5.5e-73 278.5 280 62.5
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 7.2e-73 278.1 249 64.7
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 7.2e-73 278.1 259 67.2
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 2.7e-72 276.2 251 65.7
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 4.7e-72 275.4 246 64.2
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 6.1e-72 275.0 263 63.5
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 2.3e-71 273.1 271 64.6
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 3.0e-71 272.7 260 63.8
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 2.6e-70 269.6 253 63.6
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 1.3e-69 267.3 253 67.6
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 1.7e-69 266.9 253 64.4
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 1.1e-68 264.2 280 56.8
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.4e-68 263.8 217 67.7
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.4e-68 263.8 262 61.8
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 4.1e-68 262.3 268 56.0
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 1.2e-67 260.8 247 66.8
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 2.7e-67 259.6 276 62.3
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 7.7e-67 258.1 266 56.8
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 1.7e-66 256.9 222 68.5
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 3.4e-62 242.7 250 64.0
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 3.4e-62 242.7 269 56.1
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 2.2e-61 240.0 201 65.2
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 3.7e-61 239.2 249 59.8
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 3.2e-60 236.1 249 59.0
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 9.2e-60 234.6 244 55.7
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 1.0e-58 231.1 249 57.8
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 8.6e-58 228.0 244 60.2
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 1.9e-57 226.9 254 57.1
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 2.5e-57 226.5 249 58.6
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 4.3e-57 225.7 251 56.6
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 1.6e-56 223.8 221 64.3
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 2.3e-55 219.9 248 56.5
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 2.3e-55 219.9 267 53.9
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 2.3e-55 219.9 190 63.2
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 1.7e-53 213.8 234 59.4
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 2.9e-53 213.0 204 62.7
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 8.3e-53 211.5 270 50.4
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 9.2e-52 208.0 249 53.4
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 3.5e-51 206.1 249 54.2
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 4.6e-51 205.7 240 56.7
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 2.3e-50 203.4 250 56.0
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 5.0e-50 202.2 188 58.5
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.4e-46 189.5 153 69.3
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 3.7e-45 186.0 256 45.7
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 1.9e-44 183.7 159 65.4
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.1e-41 174.5 151 60.9
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 1.1e-41 174.5 252 52.0
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 6.2e-40 168.7 256 40.2
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.8e-37 159.5 161 62.1
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 2.1e-35 153.7 261 36.8
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 3.5e-35 152.9 123 67.5
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 6.0e-35 152.1 273 42.9
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.6e-32 142.9 95 76.8
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.6e-32 142.9 95 76.8
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 1.1e-28 131.3 251 39.4
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.1e-25 121.3 215 42.3
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 4.0e-23 112.8 159 44.7
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 4.9e-21 105.9 234 36.8
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 1.4e-20 104.4 155 45.2
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 1.5e-17 94.4 157 43.9
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 1.8e-15 87.4 197 34.0
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 9.3e-12 75.1 45 66.7
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 6.0e-11 72.4 104 48.1
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 3.3e-09 66.6 111 42.3
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 2.8e-08 63.5 57 56.1


User provided reference genes

Program Settings