Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 2.8e-152 542.7 483 100.0
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 1.9e-60 237.7 484 69.2
MELO3C009103.2 Cucumis melo HOM05D007752 ORTHO05D009994 1.6e-38 164.9 140 60.7
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 7.6e-33 146.0 161 44.7
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 1.9e-28 131.3 162 40.7
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 5.7e-28 129.8 158 42.4
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 2.1e-27 127.9 162 40.1
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 3.7e-27 127.1 159 42.8
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 3.7e-27 127.1 159 42.1
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 3.7e-27 127.1 149 45.6
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 1.4e-26 125.2 140 48.6
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.2e-25 122.1 159 41.5
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 2.0e-25 121.3 159 41.5
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 1.7e-24 118.2 160 40.0
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 3.2e-23 114.0 158 39.9
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 5.5e-23 113.2 158 39.9
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 9.3e-23 112.5 142 43.0
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 2.7e-22 110.9 139 43.9
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 4.6e-22 110.2 170 40.0
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 1.9e-20 104.8 166 38.0
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 2.8e-19 100.9 156 36.5
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 4.8e-19 100.1 153 32.0
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 8.2e-19 99.4 145 36.6
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 1.8e-18 98.2 152 37.5
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 3.1e-18 97.4 158 36.7
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 5.3e-18 96.7 143 40.6
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 6.9e-18 96.3 140 37.1
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 9.0e-18 95.9 141 36.9
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 2.0e-17 94.7 140 39.3
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 4.5e-17 93.6 159 33.3
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 5.9e-17 93.2 151 37.7
MELO3C009102.2 Cucumis melo HOM05D007752 ORTHO05D009994 7.7e-17 92.8 149 45.6
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 2.9e-16 90.9 150 38.0
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 2.9e-16 90.9 150 38.0
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 3.8e-16 90.5 157 30.6
SGA_v2.0_scaffold85G26614 Striga asiatica HOM05D007752 ORTHO05D009994 4.2e-15 87.0 139 34.5
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 5.5e-15 86.7 151 31.8
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 1.6e-14 85.1 140 33.6
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.6e-14 85.1 80 52.5
SalBow5G4979 Salvia bowleyana HOM05D007752 ORTHO05D009994 6.1e-14 83.2 136 39.7
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 7.9e-14 82.8 80 51.2
THA.LOC104807022 Tarenaya hassleriana HOM05D007752 ORTHO05D009994 1.8e-13 81.6 161 34.8
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 2.3e-13 81.3 79 50.6
Cpa.g.sc86.57 Carica papaya HOM05D007752 ORTHO05D009994 3.0e-13 80.9 161 29.2
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 5.1e-13 80.1 138 32.6
Gohir.A02G003300 Gossypium hirsutum HOM05D007752 ORTHO05D009994 6.7e-13 79.7 83 42.2
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 8.8e-13 79.3 87 46.0
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 1.1e-12 79.0 125 36.0
Duzib151G0981 Durio zibethinus HOM05D007752 ORTHO05D009994 1.5e-12 78.6 67 55.2
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 1.5e-12 78.6 85 43.5
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 1.5e-12 78.6 137 32.1
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 1.5e-12 78.6 152 33.6
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 2.5e-12 77.8 78 50.0
Zm00001eb016080 Zea mays HOM05D007752 ORTHO05D009994 3.3e-12 77.4 152 30.9
ECA248G3142 Erigeron canadensis HOM05D007752 ORTHO05D009994 7.4e-12 76.3 139 29.5
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 1.1e-10 72.4 87 41.4
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 6.9e-10 69.7 148 29.1
Ah.08g209310 Amaranthus hybridus HOM05D007752 ORTHO05D009994 9.1e-10 69.3 139 30.2
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 2.6e-09 67.8 158 25.3
Gohir.D02G003700 Gossypium hirsutum HOM05D007752 ORTHO05D009994 7.7e-09 66.2 68 44.1
Sopen09g015390 Solanum pennellii HOM05D007752 ORTHO05D009994 1.0e-08 65.9 137 28.5
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 1.7e-08 65.1 80 40.0
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 6.5e-08 63.2 77 40.3
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 8.5e-08 62.8 67 44.8
PGSC0003DMG400038126 Solanum tuberosum HOM05D007752 ORTHO05D009994 1.4e-07 62.0 67 44.8
Aqoxy4G02425 Aquilegia oxysepala HOM05D007752 ORTHO05D009994 1.9e-07 61.6 67 44.8
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 1.9e-07 61.6 71 43.7
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 3.2e-07 60.8 73 45.2
VMungo0251G1651 Vigna mungo HOM05D007752 ORTHO05D009994 4.2e-07 60.5 84 40.5
Dinv16979 Davidia involucrata HOM05D007752 ORTHO05D009994 5.5e-07 60.1 138 29.0
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 9.4e-07 59.3 71 40.8
Manes.08G171200 Manihot esculenta HOM05D007752 ORTHO05D009994 2.7e-06 57.8 140 28.6
Psat3g118880 Pisum sativum HOM05D007752 ORTHO05D009994 4.7e-06 57.0 91 37.4


User provided reference genes

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