Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 1.0e-125 453.4 220 100.0
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 1.9e-103 379.4 205 91.2
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 7.8e-102 374.0 204 90.2
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 1.3e-101 373.2 205 88.8
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 1.6e-99 366.3 220 83.6
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 2.8e-91 339.0 203 81.3
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 1.1e-90 337.0 205 80.0
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 1.4e-90 336.7 202 82.2
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 4.0e-90 335.1 201 81.1
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 6.9e-90 334.3 201 82.1
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 1.2e-89 333.6 201 80.6
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 2.0e-89 332.8 205 78.5
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 2.6e-89 332.4 205 80.5
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 4.5e-89 331.6 201 81.6
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 9.9e-89 330.5 201 79.6
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 1.3e-88 330.1 201 80.1
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 1.7e-88 329.7 201 79.1
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 2.2e-88 329.3 205 80.5
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 2.9e-88 328.9 205 78.0
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 4.9e-88 328.2 201 79.6
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 6.4e-88 327.8 201 78.1
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 6.4e-88 327.8 201 78.1
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 2.4e-87 325.9 206 77.2
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 2.4e-87 325.9 205 77.6
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 4.2e-87 325.1 205 77.1
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 4.2e-87 325.1 206 77.7
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 5.5e-87 324.7 205 77.1
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 7.1e-87 324.3 201 77.6
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 1.2e-86 323.6 205 79.5
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 1.2e-86 323.6 202 77.7
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 1.6e-86 323.2 202 78.7
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 1.6e-86 323.2 205 77.1
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 1.6e-86 323.2 201 77.1
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 1.6e-86 323.2 201 78.1
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 2.1e-86 322.8 201 77.1
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 2.7e-86 322.4 208 76.4
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 3.5e-86 322.0 202 75.7
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 3.5e-86 322.0 202 76.2
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 4.6e-86 321.6 205 75.1
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 6.0e-86 321.2 206 75.7
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 7.9e-86 320.9 201 79.6
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 1.3e-85 320.1 198 77.3
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 2.3e-85 319.3 205 77.1
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 2.3e-85 319.3 202 75.7
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 3.0e-85 318.9 208 76.4
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 3.0e-85 318.9 206 76.2
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 3.9e-85 318.5 202 75.7
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 3.9e-85 318.5 202 75.2
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 5.1e-85 318.2 206 75.2
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 5.1e-85 318.2 201 79.1
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 5.1e-85 318.2 206 75.7
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 6.7e-85 317.8 201 76.6
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 6.7e-85 317.8 206 75.2
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 6.7e-85 317.8 206 75.2
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 6.7e-85 317.8 208 76.0
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 6.7e-85 317.8 206 75.7
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 8.7e-85 317.4 201 76.1
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 1.1e-84 317.0 206 75.2
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 1.1e-84 317.0 206 75.2
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 1.9e-84 316.2 206 74.8
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 1.9e-84 316.2 201 78.1
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 2.5e-84 315.8 205 76.6
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 3.3e-84 315.5 206 76.2
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 4.3e-84 315.1 202 77.7
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 7.4e-84 314.3 204 74.5
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 7.4e-84 314.3 201 75.6
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 9.6e-84 313.9 201 75.1
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 9.6e-84 313.9 198 75.8
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 1.3e-83 313.5 208 75.0
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 1.3e-83 313.5 203 75.9
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.8e-83 312.4 201 75.1
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 3.7e-83 312.0 205 75.6
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 3.7e-83 312.0 205 75.6
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 4.8e-83 311.6 201 75.1
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 1.4e-82 310.1 201 74.6
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 1.4e-82 310.1 201 72.6
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 2.4e-82 309.3 204 75.0
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 6.9e-82 307.8 200 76.5
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 6.9e-82 307.8 202 75.7
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 2.6e-81 305.8 203 73.9
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 4.5e-81 305.1 205 77.1
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 1.0e-80 303.9 201 72.1
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.4e-79 300.1 190 77.9
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 1.9e-79 299.7 197 72.6
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 7.1e-79 297.7 201 71.6
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 7.1e-79 297.7 201 71.6
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 1.6e-78 296.6 203 73.4
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 3.0e-77 292.4 202 71.3
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 1.1e-76 290.4 223 67.7
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 5.7e-76 288.1 207 71.0
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 8.2e-75 284.3 200 70.0
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 1.8e-74 283.1 191 74.3
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 1.0e-72 277.3 201 71.1
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 3.2e-71 272.3 199 71.4
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 3.2e-71 272.3 195 66.7
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 1.6e-70 270.0 201 69.2
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 6.7e-69 264.6 207 65.7
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 3.3e-68 262.3 202 65.8
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 5.7e-68 261.5 201 65.2
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 3.7e-67 258.8 173 69.4
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 5.0e-64 248.4 195 60.5
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 1.1e-63 247.3 156 76.3
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 7.9e-62 241.1 149 79.2
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 7.9e-62 241.1 187 64.2
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 1.1e-60 237.3 218 55.5
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 6.3e-59 231.5 147 76.9
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 3.2e-55 219.2 130 79.2
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.6e-54 216.9 247 51.0
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 2.1e-54 216.5 145 71.0
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 6.5e-48 194.9 167 55.1
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 7.5e-44 181.4 183 47.0
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 3.4e-36 156.0 89 80.9
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 3.2e-31 139.4 196 45.4
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 5.9e-25 118.6 85 65.9
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 1.2e-22 110.9 96 56.2
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 2.1e-22 110.2 66 80.3
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 8.0e-22 108.2 87 60.9
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 5.2e-21 105.5 86 60.5
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.9e-15 87.0 55 72.7
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 1.9e-15 87.0 64 64.1
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 1.2e-14 84.3 143 39.2
arahy.Tifrunner.gnm1.ann1.A7EL5Y Arachis hypogaea HOM05D003181 ORTHO05D003689 2.3e-08 63.5 41 68.3
MELO3C013239.2 Cucumis melo HOM05D000031 ORTHO05D000030 9.5e-07 58.2 38 65.8


User provided reference genes

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