Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 6.1e-180 634.0 320 100.0
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 1.6e-175 619.4 320 96.9
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 7.7e-175 617.1 320 96.9
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 5.4e-160 567.8 320 87.5
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 9.2e-160 567.0 320 87.2
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 1.6e-159 566.2 320 87.2
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 2.0e-159 565.8 317 88.0
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 2.7e-159 565.5 320 86.9
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 3.5e-159 565.1 320 86.6
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 4.6e-159 564.7 320 87.2
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 7.8e-159 563.9 320 86.9
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 1.7e-158 562.8 320 87.2
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 6.6e-158 560.8 320 86.9
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 1.5e-157 559.7 320 86.2
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 3.3e-157 558.5 320 85.9
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 5.6e-157 557.8 320 85.9
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 7.5e-154 547.4 320 84.4
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 9.2e-152 540.4 320 82.8
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 9.2e-152 540.4 320 84.1
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 9.2e-152 540.4 320 84.1
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 9.2e-152 540.4 320 83.8
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 3.5e-151 538.5 320 83.4
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 4.6e-151 538.1 320 83.4
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.0e-151 537.7 319 84.0
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 2.3e-150 535.8 320 83.1
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 3.0e-150 535.4 322 83.2
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 5.0e-150 534.6 328 81.7
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 4.7e-148 528.1 323 81.1
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 8.1e-148 527.3 327 80.4
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 1.4e-147 526.6 327 79.5
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 3.1e-147 525.4 327 80.1
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 3.4e-146 521.9 320 78.8
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 4.4e-146 521.5 323 80.5
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 4.4e-146 521.5 322 80.4
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 9.8e-146 520.4 326 80.1
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 1.3e-145 520.0 323 81.1
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 1.3e-145 520.0 321 81.9
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 2.2e-145 519.2 322 80.4
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 4.9e-145 518.1 320 79.4
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 3.2e-144 515.4 320 78.8
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 9.2e-144 513.8 320 78.4
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 2.1e-143 512.7 322 81.1
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 4.6e-143 511.5 320 78.4
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 6.0e-143 511.1 320 77.8
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 6.0e-143 511.1 320 78.1
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 7.8e-143 510.8 321 78.5
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 1.0e-142 510.4 325 79.7
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 1.0e-142 510.4 327 78.3
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 1.3e-142 510.0 320 77.2
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 2.3e-142 509.2 328 78.4
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 3.0e-142 508.8 326 78.2
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 3.0e-142 508.8 320 77.2
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 5.1e-142 508.1 320 77.5
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 6.6e-142 507.7 320 77.2
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 8.6e-142 507.3 320 77.2
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 1.1e-141 506.9 320 77.2
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 2.5e-141 505.8 328 77.7
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 9.5e-141 503.8 328 77.4
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 9.5e-141 503.8 328 75.6
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 2.1e-140 502.7 320 76.9
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 3.6e-140 501.9 320 76.9
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 6.2e-140 501.1 324 77.5
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 1.1e-139 500.4 320 76.6
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 1.1e-139 500.4 320 76.6
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 3.1e-139 498.8 328 75.0
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 4.0e-139 498.4 320 76.6
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 2.6e-138 495.7 328 75.3
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 3.4e-138 495.4 320 76.6
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 9.9e-138 493.8 320 75.9
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 1.7e-137 493.0 324 75.0
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.9e-137 492.3 318 78.3
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 3.8e-137 491.9 323 76.2
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 6.4e-137 491.1 320 75.6
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 3.2e-136 488.8 320 75.6
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 1.2e-135 486.9 317 76.7
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 1.0e-134 483.8 321 75.1
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.3e-134 483.4 318 77.7
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 9.6e-133 477.2 300 80.3
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 4.7e-132 474.9 325 74.5
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.4e-131 472.6 300 79.3
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 3.2e-128 462.2 320 71.2
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 3.0e-126 455.7 303 74.6
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.3e-125 451.8 305 76.7
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.4e-123 446.8 317 68.8
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.8e-123 446.4 320 69.7
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 3.1e-123 445.7 320 67.5
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 6.9e-123 444.5 320 67.8
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 9.9e-122 440.7 296 74.0
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 1.4e-120 436.8 258 85.3
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 1.0e-118 430.6 320 65.6
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 2.5e-117 426.0 319 63.9
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 1.4e-115 420.2 320 66.2
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 2.9e-113 412.5 258 79.8
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 3.0e-110 402.5 326 58.9
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 1.3e-108 397.1 320 62.2
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.2e-106 390.6 257 79.0
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.2e-106 390.6 320 63.1
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 5.8e-106 388.3 315 60.0
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.3e-105 387.1 319 61.1
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 6.5e-105 384.8 311 62.4
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 2.5e-104 382.9 229 85.2
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 1.3e-100 370.5 317 57.1
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 5.9e-98 361.7 320 57.8
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 4.6e-95 352.1 330 53.3
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.3e-94 350.5 294 60.5
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 3.0e-94 349.4 214 81.8
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 2.2e-92 343.2 316 52.5
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.1e-91 339.0 306 62.1
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 1.0e-86 324.3 322 51.6
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 2.4e-83 313.2 287 57.5
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 2.6e-82 309.7 285 56.5
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 1.1e-75 287.7 214 66.4
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 3.8e-65 252.7 297 50.2
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 4.0e-46 189.5 161 63.4
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 3.6e-39 166.4 121 67.8
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 2.0e-34 150.6 272 35.7
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 8.6e-33 145.2 108 66.7
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.8e-30 137.5 111 61.3
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 8.9e-30 135.2 112 56.2
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 5.4e-27 125.9 115 57.4
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.7e-26 123.6 108 61.1
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 8.6e-25 118.6 355 29.6
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 1.1e-22 111.7 62 83.9
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 1.4e-22 111.3 72 77.8
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 5.8e-21 105.9 337 28.2
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.2e-13 81.6 62 62.9


User provided reference genes

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