Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004594 Sechium edule HOM05D006233 ORTHO05D007247 1.6e-58 229.2 111 100.0
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 1.7e-44 182.6 90 100.0
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 9.0e-30 133.7 90 73.3
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 3.4e-29 131.7 90 72.2
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 4.5e-29 131.3 90 73.3
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 7.4e-16 87.4 92 56.5
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 3.7e-15 85.1 93 54.8
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 3.7e-15 85.1 91 52.7
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 1.1e-14 83.6 91 52.7
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 3.1e-14 82.0 92 54.3
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 1.5e-13 79.7 92 51.1
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 2.0e-13 79.3 91 49.5
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 5.0e-12 74.7 94 47.9
QL05p010226 Quercus lobata HOM05D006233 ORTHO05D007247 5.0e-12 74.7 92 46.7
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 1.1e-11 73.6 90 45.6
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 1.4e-11 73.2 91 45.1
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 2.5e-11 72.4 92 47.8
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 9.4e-11 70.5 90 45.6
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 1.2e-10 70.1 95 46.3
CSS0050466 Camellia sinensis var. sinensis HOM05D006233 ORTHO05D007247 2.1e-10 69.3 91 44.0
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 2.1e-10 69.3 92 48.9
QL05p010144 Quercus lobata HOM05D006233 ORTHO05D007247 2.1e-10 69.3 92 44.6
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 2.7e-10 68.9 90 45.6
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 6.1e-10 67.8 92 47.8
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.4e-09 66.6 90 42.2
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 1.8e-09 66.2 92 45.7
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 1.8e-09 66.2 95 44.2
FAN11G2894 Fragaria x ananassa HOM05D000283 ORTHO05D007247 1.8e-09 66.2 93 46.2
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 3.0e-09 65.5 90 44.4
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 3.9e-09 65.1 93 45.2
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 8.8e-09 63.9 93 45.2
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 8.8e-09 63.9 91 44.0
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 8.8e-09 63.9 93 45.2
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 8.8e-09 63.9 90 44.4
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 1.5e-08 63.2 92 48.9
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 1.5e-08 63.2 90 41.1
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 5.7e-08 61.2 95 40.0
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 7.4e-08 60.8 91 41.8
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 7.4e-08 60.8 96 42.7
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 7.4e-08 60.8 91 42.9
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 9.7e-08 60.5 91 45.1
RcHm_v2.0_Chr5g0063721 Rosa chinensis HOM05D006233 ORTHO05D007247 9.7e-08 60.5 91 41.8
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 1.7e-07 59.7 91 41.8
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 1.7e-07 59.7 98 45.9
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 2.2e-07 59.3 95 41.1
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 2.8e-07 58.9 92 41.3
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 3.7e-07 58.5 90 37.8
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 3.7e-07 58.5 92 41.3
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 3.7e-07 58.5 96 42.7
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 4.8e-07 58.2 91 48.4
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 4.8e-07 58.2 94 41.5
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 4.8e-07 58.2 91 44.0
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 8.2e-07 57.4 90 37.8
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 8.2e-07 57.4 91 49.5
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 1.4e-06 56.6 91 46.2
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 1.8e-06 56.2 92 38.0
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 1.8e-06 56.2 94 42.6
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 2.4e-06 55.8 90 43.3
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 2.4e-06 55.8 92 37.0
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 2.4e-06 55.8 95 43.2
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 3.1e-06 55.5 92 37.0
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 4.1e-06 55.1 93 44.1
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 5.3e-06 54.7 91 41.8
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 5.3e-06 54.7 92 40.2
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 5.3e-06 54.7 90 38.9
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 6.9e-06 54.3 91 39.6
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 9.1e-06 53.9 94 38.3


User provided reference genes

Program Settings