Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 8.6e-137 490.3 252 100.0
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 4.6e-130 468.0 250 94.4
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 2.3e-129 465.7 252 93.7
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 3.0e-129 465.3 252 94.0
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 1.3e-124 449.9 251 87.3
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 2.2e-124 449.1 252 88.9
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 2.4e-123 445.7 252 88.5
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 5.4e-123 444.5 252 88.1
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 1.2e-122 443.4 252 87.7
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 2.7e-122 442.2 252 86.9
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 2.7e-122 442.2 252 86.5
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 3.5e-122 441.8 252 87.7
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 6.0e-122 441.0 252 88.1
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 7.8e-122 440.7 252 86.1
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 7.8e-122 440.7 252 86.9
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 1.0e-121 440.3 252 86.9
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 1.0e-121 440.3 252 86.9
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 1.0e-121 440.3 252 86.9
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 2.3e-121 439.1 252 86.5
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 3.0e-121 438.7 252 86.9
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 1.1e-120 436.8 252 86.1
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 1.5e-120 436.4 252 87.3
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 2.5e-120 435.6 252 85.3
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 9.5e-120 433.7 252 86.1
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.2e-119 433.3 252 83.7
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 1.6e-119 433.0 252 85.7
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 2.8e-119 432.2 252 85.3
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 3.6e-119 431.8 254 85.0
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 4.7e-119 431.4 252 83.7
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 4.7e-119 431.4 252 84.5
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 8.1e-119 430.6 252 83.3
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 1.4e-118 429.9 252 84.1
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 1.4e-118 429.9 252 83.7
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 1.8e-118 429.5 252 84.1
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 1.8e-118 429.5 252 84.5
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 4.0e-118 428.3 254 84.3
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 5.2e-118 427.9 252 84.1
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 5.2e-118 427.9 252 83.3
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 8.9e-118 427.2 252 83.7
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.2e-117 426.8 252 85.7
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 1.2e-117 426.8 252 83.7
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 2.6e-117 425.6 252 83.7
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 3.4e-117 425.2 252 82.9
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 4.4e-117 424.9 252 83.3
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 5.8e-117 424.5 253 85.0
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 7.6e-117 424.1 250 82.4
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 1.7e-116 422.9 252 82.1
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 2.2e-116 422.5 252 82.5
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 2.2e-116 422.5 250 82.8
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 2.9e-116 422.2 253 83.8
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 2.9e-116 422.2 252 84.5
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 81.3
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 1.1e-115 420.2 252 83.7
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 1.4e-115 419.9 252 82.5
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 1.9e-115 419.5 249 82.3
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 2.4e-115 419.1 252 81.7
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 2.4e-115 419.1 252 83.3
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 2.4e-115 419.1 252 81.7
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 3.2e-115 418.7 252 82.9
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 3.2e-115 418.7 252 83.7
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 7.1e-115 417.5 252 82.9
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 9.2e-115 417.2 252 84.1
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 1.2e-114 416.8 252 82.5
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 1.2e-114 416.8 281 75.4
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 2.1e-114 416.0 256 80.9
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 80.2
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 3.5e-114 415.2 256 80.9
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 3.5e-114 415.2 252 81.0
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 4.6e-114 414.8 283 75.3
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 1.0e-113 413.7 252 81.3
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 1.7e-113 412.9 252 79.8
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 6.6e-113 411.0 252 79.0
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 6.6e-113 411.0 252 78.6
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 1.1e-112 410.2 252 79.0
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 1.1e-112 410.2 253 79.4
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 1.5e-112 409.8 252 79.8
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 81.0
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 3.3e-112 408.7 250 80.4
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 1.2e-111 406.8 252 78.6
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 1.2e-111 406.8 254 79.9
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 1.2e-111 406.8 250 80.0
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 2.1e-111 406.0 283 73.5
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 6.2e-111 404.4 239 83.7
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 2.4e-110 402.5 252 79.4
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 2.4e-110 402.5 260 78.5
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 2.4e-110 402.5 250 79.6
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 9.0e-110 400.6 260 77.3
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 6.4e-108 394.4 252 79.0
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 7.8e-106 387.5 272 75.4
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 6.6e-105 384.4 256 74.6
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 2.8e-103 379.0 256 73.0
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 4.5e-101 371.7 252 73.4
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 9.9e-101 370.5 221 84.2
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 9.9e-101 370.5 254 72.4
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 2.4e-99 365.9 252 72.6
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 9.3e-99 364.0 252 72.6
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 1.1e-96 357.1 252 73.4
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 2.5e-96 355.9 267 66.7
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 7.6e-93 344.4 260 70.0
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 1.8e-89 333.2 190 85.3
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 1.4e-86 323.6 191 84.3
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 7.6e-85 317.8 274 64.2
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 4.9e-84 315.1 177 88.1
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 2.1e-82 309.7 177 85.9
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 2.7e-82 309.3 229 69.0
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 1.0e-81 307.4 252 63.1
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.8e-81 306.6 176 84.1
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 3.6e-74 282.3 278 54.7
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 7.9e-74 281.2 256 57.4
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 1.4e-67 260.4 155 83.9
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 2.1e-66 256.5 252 57.1
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 1.1e-62 244.2 254 51.2
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 3.1e-62 242.7 157 77.7
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 1.3e-55 220.7 254 47.2
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 6.1e-50 201.8 123 78.0
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 1.3e-39 167.5 91 86.8
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 6.6e-36 155.2 108 75.0
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 3.3e-35 152.9 96 74.0
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 1.7e-28 130.6 98 67.3
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 3.6e-18 96.3 93 53.8
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.9e-14 84.0 48 81.2
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 1.6e-10 70.9 34 88.2
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 1.6e-10 70.9 69 53.6
Actinidia11341 Actinidia chinensis HOM05D006457 ORTHO05D056652 1.4e-06 57.8 41 68.3


User provided reference genes

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