Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000259 Sechium edule HOM05D005591 ORTHO05D007131 3.8e-199 698.0 354 100.0
ClCG00G002040 Citrullus lanatus HOM05D005591 ORTHO05D007131 5.7e-179 630.9 351 90.9
CsaV3_6G003160 Cucumis sativus L. HOM05D005591 ORTHO05D007131 3.1e-177 625.2 354 89.3
MELO3C011502.2 Cucumis melo HOM05D005591 ORTHO05D007131 9.1e-177 623.6 354 90.1
ClCG08G003960 Citrullus lanatus HOM05D005591 ORTHO05D007131 4.0e-172 608.2 340 90.0
Actinidia35920 Actinidia chinensis HOM05D005591 ORTHO05D007131 8.9e-140 500.7 347 76.1
CiPaw.01G109900 Carya illinoinensis HOM05D005591 ORTHO05D007131 2.0e-139 499.6 350 75.1
QL05p063015 Quercus lobata HOM05D005591 ORTHO05D007131 7.6e-139 497.7 347 74.4
TWI34G1086 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 4.9e-138 495.0 355 72.7
CSS0046220 Camellia sinensis var. sinensis HOM05D005591 ORTHO05D007131 7.1e-137 491.1 351 73.5
Ciclev10020911m.g Citrus clementina HOM05D005591 ORTHO05D007131 1.0e-135 487.3 348 74.4
Dinv27163 Davidia involucrata HOM05D005591 ORTHO05D007131 5.1e-135 485.0 352 73.6
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla HOM05D005591 ORTHO05D007131 1.1e-134 483.8 347 74.4
Duzib212G0264 Durio zibethinus HOM05D005591 ORTHO05D007131 1.5e-134 483.4 355 74.4
SalBow4G1474 Salvia bowleyana HOM05D005591 ORTHO05D007131 2.5e-134 482.6 326 77.6
Gorai.011G147400 Gossypium raimondii HOM05D005591 ORTHO05D007131 4.3e-134 481.9 347 74.9
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea HOM05D005591 ORTHO05D007131 9.6e-134 480.7 310 79.4
PGR083G2576 Punica granatum HOM05D005591 ORTHO05D007131 1.2e-133 480.3 353 73.4
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea HOM05D005591 ORTHO05D007131 2.1e-133 479.6 297 82.2
TWI60G1035 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 2.8e-133 479.2 355 72.1
PGSC0003DMG402024734 Solanum tuberosum HOM05D005591 ORTHO05D007131 4.7e-133 478.4 358 71.5
VMungo0720G0134 Vigna mungo HOM05D005591 ORTHO05D007131 6.2e-133 478.0 352 73.0
TPR.G37202 Trifolium pratense HOM05D005591 ORTHO05D007131 8.1e-133 477.6 298 81.9
SalBow4G1598 Salvia bowleyana HOM05D005591 ORTHO05D007131 1.1e-132 477.2 329 76.9
Lj3g0022648 Lotus japonicus HOM05D005591 ORTHO05D007131 1.4e-132 476.9 317 77.9
Potri.002G234400 Populus trichocarpa HOM05D005591 ORTHO05D007131 1.4e-132 476.9 349 72.5
Ca_26812_v3 Cicer arietinum L. HOM05D005591 ORTHO05D007131 3.1e-132 475.7 298 81.2
Lj2P1154T29 Lonicera japonica HOM05D005591 ORTHO05D007131 3.1e-132 475.7 311 78.1
Psat5g221840 Pisum sativum HOM05D005591 ORTHO05D007131 4.0e-132 475.3 351 71.5
CAN.G1648.2 Capsicum annuum HOM05D005591 ORTHO05D007131 6.9e-132 474.6 357 70.6
TAR375G0642 Trochodendron aralioides HOM05D005591 ORTHO05D007131 6.9e-132 474.6 351 72.4
Phvul.008G142801 Phaseolus vulgaris HOM05D005591 ORTHO05D007131 1.5e-131 473.4 302 81.1
Peaxi162Scf00673g00002 Petunia axillaris HOM05D005591 ORTHO05D007131 3.4e-131 472.2 313 78.0
Glyma.20G208100 Glycine max HOM05D005591 ORTHO05D007131 7.6e-131 471.1 352 70.7
Medtr3g005100 Medicago truncatula HOM05D005591 ORTHO05D007131 7.6e-131 471.1 298 80.2
Nitab4.5_0000368g0340 Nicotiana tabacum HOM05D005591 ORTHO05D007131 7.6e-131 471.1 315 77.1
Nitab4.5_0006072g0030 Nicotiana tabacum HOM05D005591 ORTHO05D007131 7.6e-131 471.1 314 77.4
TPR.G25529 Trifolium pratense HOM05D005591 ORTHO05D007131 7.6e-131 471.1 297 80.5
Thecc.04G188000 Theobroma cacao HOM05D005591 ORTHO05D007131 9.9e-131 470.7 306 80.7
Lalb_Chr12g0209371 Lupinus albus HOM05D005591 ORTHO05D007131 2.2e-130 469.5 311 78.8
Lalb_Chr12g0205911 Lupinus albus HOM05D005591 ORTHO05D007131 3.8e-130 468.8 307 77.9
MSTRG.18314 Avicennia marina HOM05D005591 ORTHO05D007131 8.4e-130 467.6 346 71.4
Gohir.A10G133200 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.1e-129 467.2 346 72.8
Solyc01g100250.3 Solanum lycopersicum HOM05D005591 ORTHO05D007131 1.4e-129 466.8 359 69.6
EL10Ac9g21576 Beta vulgaris HOM05D005591 ORTHO05D007131 4.2e-129 465.3 340 70.9
Sabra02G0178800 Salix brachista HOM05D005591 ORTHO05D007131 4.2e-129 465.3 308 78.2
Glyma.10G181900 Glycine max HOM05D005591 ORTHO05D007131 1.2e-128 463.8 302 79.1
Manes.16G070000 Manihot esculenta HOM05D005591 ORTHO05D007131 1.3e-127 460.3 346 71.1
Gorai.006G226400 Gossypium raimondii HOM05D005591 ORTHO05D007131 3.9e-127 458.8 349 70.5
Thhalv10008071m.g Eutrema salsugineum HOM05D005591 ORTHO05D007131 5.1e-127 458.4 299 76.9
MD05G1209200 Malus domestica HOM05D005591 ORTHO05D007131 5.1e-127 458.4 343 70.3
AT1G19800 Arabidopsis thaliana HOM05D005591 ORTHO05D007131 1.1e-126 457.2 303 76.2
AUR62010234 Chenopodium quinoa HOM05D005591 ORTHO05D007131 1.9e-126 456.4 304 78.3
AUR62013219 Chenopodium quinoa HOM05D005591 ORTHO05D007131 4.3e-126 455.3 304 78.3
THA.LOC104827705 Tarenaya hassleriana HOM05D005591 ORTHO05D007131 4.3e-126 455.3 308 76.0
AL1G32520 Arabidopsis lyrata HOM05D005591 ORTHO05D007131 5.6e-126 454.9 302 76.2
Sp1g17610 Schrenkiella parvula HOM05D005591 ORTHO05D007131 5.6e-126 454.9 297 76.4
A06p15920 Brassica napus HOM05D005591 ORTHO05D007131 1.6e-125 453.4 299 76.3
Gohir.A09G209100 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.6e-125 453.4 347 70.3
C05p18230 Brassica napus HOM05D005591 ORTHO05D007131 2.1e-125 453.0 299 75.9
Aa31LG7G4330 Aethionema arabicum HOM05D005591 ORTHO05D007131 2.8e-125 452.6 305 75.4
CARHR020310 Cardamine hirsuta HOM05D005591 ORTHO05D007131 2.8e-125 452.6 292 78.1
Gohir.D09G202500 Gossypium hirsutum HOM05D005591 ORTHO05D007131 2.8e-125 452.6 349 69.6
BraA06t24698Z Brassica rapa HOM05D005591 ORTHO05D007131 3.6e-125 452.2 299 76.3
Carub.0001s1933 Capsella rubella HOM05D005591 ORTHO05D007131 3.6e-125 452.2 300 76.0
MBI07_g20439_MAGBIO Magnolia biondii HOM05D005591 ORTHO05D007131 6.2e-125 451.4 303 76.2
BolC5t30530H Brassica oleracea HOM05D005591 ORTHO05D007131 8.1e-125 451.1 299 75.9
Aqoxy5G02725 Aquilegia oxysepala HOM05D005591 ORTHO05D007131 3.1e-124 449.1 360 68.3
SGA_v2.0_scaffold90G27691 Striga asiatica HOM05D005591 ORTHO05D007131 3.1e-124 449.1 327 73.4
BcaB03g12900 Brassica carinata HOM05D005591 ORTHO05D007131 4.0e-124 448.7 321 72.6
Nn3g18591 Nelumbo nucifera HOM05D005591 ORTHO05D007131 6.9e-124 448.0 291 79.4
SGA_v2.0_scaffold1G00602 Striga asiatica HOM05D005591 ORTHO05D002031 1.5e-123 446.8 327 73.1
BcaC07g38997 Brassica carinata HOM05D005591 ORTHO05D007131 3.4e-123 445.7 298 75.8
C08p19710 Brassica napus HOM05D005591 ORTHO05D007131 3.4e-123 445.7 298 75.8
BolC8t49608H Brassica oleracea HOM05D005591 ORTHO05D007131 7.6e-123 444.5 298 75.5
FAN11G3688 Fragaria x ananassa HOM05D005591 ORTHO05D007131 4.9e-122 441.8 353 67.4
Haze_12970 Corylus avellana HOM05D005591 ORTHO05D007131 8.4e-122 441.0 350 68.6
FvH4_3g16560 Fragaria vesca HOM05D005591 ORTHO05D007131 1.4e-121 440.3 353 67.1
RcHm_v2.0_Chr5g0027591 Rosa chinensis HOM05D005591 ORTHO05D007131 1.9e-121 439.9 344 67.2
Eucgr.E02433 Eucalyptus grandis HOM05D005591 ORTHO05D007131 3.2e-121 439.1 343 69.4
FAN16G2920 Fragaria x ananassa HOM05D005591 ORTHO05D007131 3.2e-121 439.1 353 67.1
COL.COLO4_08690 Corchorus olitorius HOM05D005591 ORTHO05D007131 9.3e-121 437.6 319 74.0
FAN21G2901 Fragaria x ananassa HOM05D005591 ORTHO05D007131 7.9e-120 434.5 353 66.9
MD10G1195600 Malus domestica HOM05D005591 ORTHO05D007131 2.3e-119 433.0 343 67.9
ATR0681G262 Amborella trichopoda HOM05D005591 ORTHO05D007131 8.7e-119 431.0 300 75.3
Haze_05998 Corylus avellana HOM05D005591 ORTHO05D007131 8.7e-119 431.0 339 68.7
Oeu061431.3 Olea europaea HOM05D005591 ORTHO05D007131 8.7e-119 431.0 347 68.6
Gohir.D10G133600 Gossypium hirsutum HOM05D005591 ORTHO05D007131 3.3e-118 429.1 346 69.7
Lsat_1_v5_gn_1_5881 Lactuca sativa HOM05D005591 ORTHO05D007131 4.3e-118 428.7 312 72.1
GSVIVG01031642001 Vitis vinifera HOM05D005591 ORTHO05D007131 5.6e-118 428.3 348 67.0
Prupe.4G148300 Prunus persica HOM05D005591 ORTHO05D007131 9.6e-118 427.6 344 66.3
Atru.chr7.136 Acer truncatum HOM05D005591 ORTHO05D007131 1.3e-117 427.2 345 65.8
Cc11_g03530 Coffea canephora HOM05D005591 ORTHO05D007131 2.8e-117 426.0 346 67.9
Cfa014468 Carpinus fangiana HOM05D005591 ORTHO05D007131 4.5e-115 418.7 298 75.2
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 6.4e-114 414.8 257 81.7
Sc08g0001750 Simmondsia chinensis HOM05D005591 ORTHO05D007131 6.4e-114 414.8 349 64.5
Sopen01g043760 Solanum pennellii HOM05D005591 ORTHO05D007131 1.4e-113 413.7 321 69.5
Duzib151G0749 Durio zibethinus HOM05D005591 ORTHO05D007131 3.2e-113 412.5 242 88.8
CANSAT78G0984 Cannabis sativa HOM05D005591 ORTHO05D007131 5.5e-113 411.8 339 65.5
Hund00109 Selenicereus undatus HOM05D005591 ORTHO05D007131 2.7e-112 409.5 308 71.4
CAN.G1273.6 Capsicum annuum HOM05D005591 ORTHO05D007131 1.0e-111 407.5 356 61.2
PSO063G3984 Papaver somniferum HOM05D005591 ORTHO05D007131 1.9e-110 403.3 304 71.7
ECA232G4773 Erigeron canadensis HOM05D005591 ORTHO05D007131 3.3e-110 402.5 344 65.7
PSO339G5872 Papaver somniferum HOM05D005591 ORTHO05D007131 4.3e-110 402.1 304 71.7
Migut.D00413 Erythranthe guttata HOM05D005591 ORTHO05D007131 5.6e-110 401.7 361 61.8
FAN25G3010 Fragaria x ananassa HOM05D005591 ORTHO05D007131 2.8e-109 399.4 340 64.4
SEGI_17332 Sequoiadendron giganteum HOM05D005591 ORTHO05D007131 2.6e-107 392.9 289 69.6
SMO367G0743 Selaginella moellendorffii HOM05D005591 ORTHO05D007131 3.4e-107 392.5 304 67.1
Pp3c1_16480 Physcomitrium patens HOM05D005591 ORTHO05D007131 1.0e-106 391.0 294 70.1
Os04g0553000 Oryza sativa ssp. japonica HOM05D005591 ORTHO05D007131 6.5e-106 388.3 258 74.8
Zm00001eb074560 Zea mays HOM05D005591 ORTHO05D007131 6.5e-106 388.3 261 74.3
CDE02G1973 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 4.6e-104 382.1 304 67.1
HanXRQChr10g0315741 Helianthus annuus HOM05D005591 ORTHO05D007131 4.6e-104 382.1 299 68.2
Mapoly0204s0010 Marchantia polymorpha HOM05D005591 ORTHO05D007131 1.0e-103 380.9 293 67.6
Rhsim02G0070200 Rhododendron simsii HOM05D005591 ORTHO05D007131 1.8e-103 380.2 346 61.6
BcaB07g31994 Brassica carinata HOM05D005591 ORTHO05D007131 8.2e-101 371.3 299 65.9
CBR_g24384 Chara braunii HOM05D005591 ORTHO05D007131 3.1e-100 369.4 260 71.2
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis HOM05D005591 ORTHO05D007131 5.1e-95 352.1 245 73.1
Medtr3g008040 Medicago truncatula HOM05D005591 ORTHO05D007131 1.1e-94 350.9 283 68.2
Cre06.g268200 Chlamydomonas reinhardtii HOM05D005591 ORTHO05D007131 1.1e-89 334.3 328 56.4
PRCOL_00005194 Prasinoderma coloniale HOM05D005591 ORTHO05D007131 9.1e-84 314.7 252 62.3
HPP92_028331 Vanilla planifolia HOM05D005591 ORTHO05D007131 2.2e-82 310.1 251 67.3
Cpa.g.sc8.310 Carica papaya HOM05D005591 ORTHO05D007131 1.6e-80 303.9 177 90.4
MCO01G348 Micromonas commoda HOM05D005591 ORTHO05D007131 4.8e-77 292.4 282 56.0
vmacro15598 Vaccinium macrocarpon HOM05D005591 ORTHO05D007131 6.3e-69 265.4 312 52.2
unitig_22.g5460 Utricularia gibba HOM05D005591 ORTHO05D007131 4.1e-68 262.7 168 77.4
CDE11G0925 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 2.9e-66 256.5 191 73.8
CBR_g4088 Chara braunii HOM05D005591 ORTHO05D007131 2.0e-51 207.2 157 70.1
CBR_g4089 Chara braunii HOM05D005591 ORTHO05D007131 3.9e-42 176.4 178 51.7
unitig_22.g5461 Utricularia gibba HOM05D005591 ORTHO05D007131 1.4e-39 167.9 103 83.5
DCAR_018469 Daucus carota HOM05D005591 ORTHO05D007131 1.0e-34 151.8 103 77.7
DCAR_018470 Daucus carota HOM05D005591 ORTHO05D007131 1.0e-34 151.8 103 77.7
BraA08t34904Z Brassica rapa HOM05D005591 ORTHO05D011946 1.2e-30 138.3 120 60.8
Actinidia29179 Actinidia chinensis HOM05D005591 ORTHO05D007131 3.6e-24 116.7 217 40.1
BcaC05g25857 Brassica carinata HOM05D005591 ORTHO05D007131 3.4e-22 110.2 63 84.1
Ca_28569_v3 Cicer arietinum L. HOM05D005591 ORTHO05D149412 3.9e-18 96.7 192 30.7
Cc01_g18470 Coffea canephora HOM05D005591 ORTHO05D007131 1.1e-12 78.6 44 75.0


User provided reference genes

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