Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000109 Sechium edule HOM05D003199 ORTHO05D003528 1.1e-82 310.1 169 100.0
CsaV3_1G009300 Cucumis sativus L. HOM05D003199 ORTHO05D003528 2.7e-46 189.1 166 67.5
ClCG03G003500 Citrullus lanatus HOM05D003199 ORTHO05D003528 3.1e-42 175.6 170 65.9
MELO3C002333.2 Cucumis melo HOM05D003199 ORTHO05D003528 1.5e-39 166.8 169 60.9
MSTRG.4586 Avicennia marina HOM05D003199 ORTHO05D003528 2.1e-22 109.8 116 52.6
Eucgr.I01653 Eucalyptus grandis HOM05D003199 ORTHO05D003528 1.7e-19 100.1 130 47.7
Oeu011754.1 Olea europaea HOM05D003199 ORTHO05D003528 4.9e-19 98.6 115 49.6
AUR62003498 Chenopodium quinoa HOM05D003199 ORTHO05D003528 1.4e-18 97.1 152 45.4
AUR62025727 Chenopodium quinoa HOM05D003199 ORTHO05D003528 1.6e-17 93.6 177 37.9
AUR62001279 Chenopodium quinoa HOM05D003199 ORTHO05D003528 2.7e-17 92.8 177 36.7
ClCG05G013420 Citrullus lanatus HOM05D003199 ORTHO05D003528 3.5e-17 92.4 141 48.2
FAN08G2398 Fragaria x ananassa HOM05D003199 ORTHO05D003528 3.5e-17 92.4 131 42.7
CsaV3_3G027140 Cucumis sativus L. HOM05D003199 ORTHO05D003528 4.6e-17 92.0 132 50.0
Lj4g0002784 Lotus japonicus HOM05D003199 ORTHO05D003528 4.6e-17 92.0 127 44.1
Nitab4.5_0002911g0010 Nicotiana tabacum HOM05D003199 ORTHO05D003528 6.0e-17 91.7 175 42.3
MELO3C014875.2 Cucumis melo HOM05D003199 ORTHO05D003528 7.8e-17 91.3 187 41.2
Medtr4g104210 Medicago truncatula HOM05D003199 ORTHO05D003528 8.6e-16 87.8 113 48.7
Prupe.5G156900 Prunus persica HOM05D003199 ORTHO05D003528 1.1e-15 87.4 130 46.9
Nitab4.5_0000040g0380 Nicotiana tabacum HOM05D003199 ORTHO05D003528 1.5e-15 87.0 177 40.1
Ca_05564_v3 Cicer arietinum L. HOM05D003199 ORTHO05D003528 9.5e-15 84.3 170 41.8
Prupe.3G305100 Prunus persica HOM05D003199 ORTHO05D003528 1.2e-14 84.0 190 40.5
Sed0014935 Sechium edule HOM05D003199 ORTHO05D003528 1.2e-14 84.0 179 40.2
Migut.D01231 Erythranthe guttata HOM05D003199 ORTHO05D003528 2.1e-14 83.2 116 46.6
HanXRQChr05g0154721 Helianthus annuus HOM05D003199 ORTHO05D003528 2.8e-14 82.8 102 47.1
Lalb_Chr02g0157721 Lupinus albus HOM05D003199 ORTHO05D003528 3.6e-14 82.4 163 38.0
MD17G1012600 Malus domestica HOM05D003199 ORTHO05D003528 3.6e-14 82.4 175 41.7
Aa31LG2G5470 Aethionema arabicum HOM05D003199 ORTHO05D003528 4.7e-14 82.0 114 43.0
Aqoxy5G03579 Aquilegia oxysepala HOM05D003199 ORTHO05D003528 4.7e-14 82.0 116 46.6
ECA246G3163 Erigeron canadensis HOM05D003199 ORTHO05D003528 4.7e-14 82.0 116 43.1
Ca_14371_v3 Cicer arietinum L. HOM05D003199 ORTHO05D003528 6.2e-14 81.6 185 38.4
arahy.Tifrunner.gnm1.ann1.S1U1UA Arachis hypogaea HOM05D003199 ORTHO05D003528 1.1e-13 80.9 78 56.4
Phvul.001G094500 Phaseolus vulgaris HOM05D003199 ORTHO05D003528 1.1e-13 80.9 172 39.5
CiPaw.12G035800 Carya illinoinensis HOM05D003199 ORTHO05D003528 1.4e-13 80.5 101 46.5
Glyma.05G044800 Glycine max HOM05D003199 ORTHO05D003528 1.8e-13 80.1 101 49.5
Sabra16G0212600 Salix brachista HOM05D003199 ORTHO05D003528 1.8e-13 80.1 106 48.1
Lj2g0014633 Lotus japonicus HOM05D003199 ORTHO05D003528 3.1e-13 79.3 183 37.7
QL10p005054 Quercus lobata HOM05D003199 ORTHO05D003528 3.1e-13 79.3 182 39.0
CiPaw.04G036000 Carya illinoinensis HOM05D003199 ORTHO05D003528 1.5e-12 77.0 130 40.8
Medtr7g029325 Medicago truncatula HOM05D003199 ORTHO05D003528 1.5e-12 77.0 119 41.2
Glyma.05G077200 Glycine max HOM05D003199 ORTHO05D003528 2.0e-12 76.6 136 41.2
CAN.G1491.4 Capsicum annuum HOM05D003199 ORTHO05D003528 7.5e-12 74.7 135 38.5
Potri.001G331600 Populus trichocarpa HOM05D003199 ORTHO05D003528 9.9e-12 74.3 162 37.0
EL10Ac7g18075 Beta vulgaris HOM05D003199 ORTHO05D003528 1.3e-11 73.9 149 36.9
DCAR_026209 Daucus carota HOM05D003199 ORTHO05D003528 1.3e-11 73.9 60 61.7
Glyma.17G181000 Glycine max HOM05D003199 ORTHO05D003528 1.3e-11 73.9 170 38.8
VMungo1383G1719 Vigna mungo HOM05D003199 ORTHO05D003528 2.2e-11 73.2 172 37.2
FAN04G2235 Fragaria x ananassa HOM05D003199 ORTHO05D003528 2.9e-11 72.8 156 35.9
PGR142G2189 Punica granatum HOM05D003199 ORTHO05D003528 6.4e-11 71.6 175 38.3
FvH4_5g07520 Fragaria vesca HOM05D003199 ORTHO05D003528 1.1e-10 70.9 171 31.0
Oeu044613.1 Olea europaea HOM05D003199 ORTHO05D003528 2.4e-10 69.7 102 45.1
Cc07_g00740 Coffea canephora HOM05D003199 ORTHO05D003528 3.2e-10 69.3 115 40.0
Psat4g062640 Pisum sativum HOM05D003199 ORTHO05D003528 4.1e-10 68.9 82 48.8
Lj5C100G11 Lonicera japonica HOM05D003199 ORTHO05D003528 9.2e-10 67.8 94 46.8
Peaxi162Scf00089g00228 Petunia axillaris HOM05D003199 ORTHO05D003528 9.2e-10 67.8 99 41.4
Lju41C52T19 Lonicera japonica HOM05D003199 ORTHO05D003528 1.2e-09 67.4 60 55.0
Solyc03g110930.3 Solanum lycopersicum HOM05D003199 ORTHO05D003528 1.6e-09 67.0 99 41.4
Glyma.19G090000 Glycine max HOM05D003199 ORTHO05D003528 2.1e-09 66.6 171 33.3
Atru.chr9.1013 Acer truncatum HOM05D003199 ORTHO05D003528 2.7e-09 66.2 100 46.0
EL10Ac9g20876 Beta vulgaris HOM05D003199 ORTHO05D003528 2.7e-09 66.2 60 60.0
EL10Ac3g06205 Beta vulgaris HOM05D003199 ORTHO05D003528 3.5e-09 65.9 59 61.0
Oeu011964.1 Olea europaea HOM05D003199 ORTHO05D003528 3.5e-09 65.9 74 52.7
PGR083G2579 Punica granatum HOM05D003199 ORTHO05D003528 4.6e-09 65.5 81 51.9
Sopen03g030120 Solanum pennellii HOM05D003199 ORTHO05D003528 4.6e-09 65.5 99 41.4
COL.COLO4_17189 Corchorus olitorius HOM05D003199 ORTHO05D003528 7.8e-09 64.7 41 70.7
THA.LOC104825617 Tarenaya hassleriana HOM05D003199 ORTHO05D003528 7.8e-09 64.7 128 38.3
Actinidia36788 Actinidia chinensis HOM05D003199 ORTHO05D003528 1.0e-08 64.3 102 41.2
BcaB07g30185 Brassica carinata HOM05D003199 ORTHO05D003528 1.0e-08 64.3 51 56.9
Eucgr.J02332 Eucalyptus grandis HOM05D003199 ORTHO05D003528 1.3e-08 63.9 74 52.7
Lsat_1_v5_gn_5_13260 Lactuca sativa HOM05D003199 ORTHO05D003528 1.3e-08 63.9 101 43.6
VMungo1215G0313 Vigna mungo HOM05D003199 ORTHO05D003528 1.3e-08 63.9 116 39.7
Gohir.A09G035300 Gossypium hirsutum HOM05D003199 ORTHO05D003528 1.7e-08 63.5 119 42.0
Potri.012G092700 Populus trichocarpa HOM05D003199 ORTHO05D003528 3.0e-08 62.8 60 55.0
BraA09t35967Z Brassica rapa HOM05D003199 ORTHO05D003528 3.9e-08 62.4 50 56.0
Gohir.D09G036100 Gossypium hirsutum HOM05D003199 ORTHO05D003528 3.9e-08 62.4 120 41.7
Gorai.006G041200 Gossypium raimondii HOM05D003199 ORTHO05D003528 3.9e-08 62.4 120 41.7
MSTRG.15567 Avicennia marina HOM05D005860 ORTHO05D006977 6.6e-08 61.6 130 41.5
A02p35140 Brassica napus HOM05D003199 ORTHO05D003528 6.6e-08 61.6 75 48.0
AL8G40380 Arabidopsis lyrata HOM05D003199 ORTHO05D003528 8.6e-08 61.2 182 35.2
CAN.G473.92 Capsicum annuum HOM05D003199 ORTHO05D003528 1.5e-07 60.5 112 42.9
BcaB04g19427 Brassica carinata HOM05D003199 ORTHO05D003528 1.9e-07 60.1 120 36.7
TPR.G37524 Trifolium pratense HOM05D003199 ORTHO05D003528 1.9e-07 60.1 173 34.1
TPR.G38327 Trifolium pratense HOM05D003199 ORTHO05D003528 1.9e-07 60.1 72 47.2
C02p53770 Brassica napus HOM05D003199 ORTHO05D003528 2.5e-07 59.7 123 39.0
Duzib205G0007 Durio zibethinus HOM05D003199 ORTHO05D003528 2.5e-07 59.7 99 41.4
FAN18G2541 Fragaria x ananassa HOM05D003199 ORTHO05D003528 2.5e-07 59.7 155 32.3
BcaC03g17429 Brassica carinata HOM05D003199 ORTHO05D003528 3.3e-07 59.3 121 38.8
BolC2t11446H Brassica oleracea HOM05D003199 ORTHO05D003528 3.3e-07 59.3 121 38.8
BraA02t08519Z Brassica rapa HOM05D003199 ORTHO05D003528 3.3e-07 59.3 125 38.4
CARHR148360 Cardamine hirsuta HOM05D003199 ORTHO05D003528 3.3e-07 59.3 124 37.1
Ciclev10022507m.g Citrus clementina HOM05D003199 ORTHO05D003528 3.3e-07 59.3 181 33.7
MD09G1012000 Malus domestica HOM05D003199 ORTHO05D003528 3.3e-07 59.3 75 49.3
RcHm_v2.0_Chr2g0175441 Rosa chinensis HOM05D003199 ORTHO05D003528 3.3e-07 59.3 178 34.8
Migut.F00072 Erythranthe guttata HOM05D003199 ORTHO05D003528 4.3e-07 58.9 126 38.1
Nitab4.5_0010637g0020 Nicotiana tabacum HOM05D003199 ORTHO05D003528 4.3e-07 58.9 99 38.4
FAN05G2482 Fragaria x ananassa HOM05D003199 ORTHO05D003528 5.6e-07 58.5 178 35.4
PGR083G2021 Punica granatum HOM05D003199 ORTHO05D003528 7.3e-07 58.2 91 40.7
FAN02G1758 Fragaria x ananassa HOM05D003199 ORTHO05D003528 1.2e-06 57.4 181 34.8
AT5G63300 Arabidopsis thaliana HOM05D003199 ORTHO05D003528 1.6e-06 57.0 181 34.3
FvH4_6g53290 Fragaria vesca HOM05D003199 ORTHO05D003528 1.6e-06 57.0 179 32.4
Hund05646 Selenicereus undatus HOM05D003199 ORTHO05D003528 1.6e-06 57.0 171 33.9
Thhalv10004988m.g Eutrema salsugineum HOM05D003199 ORTHO05D003528 2.1e-06 56.6 122 38.5
Pp3c23_14280 Physcomitrium patens HOM05D003199 ORTHO05D003528 2.1e-06 56.6 91 40.7
VMungo0464G0590 Vigna mungo HOM05D003199 ORTHO05D003528 2.1e-06 56.6 60 51.7
BcaC04g23918 Brassica carinata HOM05D003199 ORTHO05D003528 2.8e-06 56.2 119 36.1
C09p03490 Brassica napus HOM05D003199 ORTHO05D003528 2.8e-06 56.2 119 36.1
BolC9t53270H Brassica oleracea HOM05D003199 ORTHO05D003528 2.8e-06 56.2 119 36.1
Lalb_Chr24g0403341 Lupinus albus HOM05D003199 ORTHO05D003528 2.8e-06 56.2 92 44.6
Manes.15G159800 Manihot esculenta HOM05D003199 ORTHO05D003528 2.8e-06 56.2 128 38.3
SalBow1G6303 Salvia bowleyana HOM05D003199 ORTHO05D003528 2.8e-06 56.2 98 36.7
THA.LOC104823979 Tarenaya hassleriana HOM05D003199 ORTHO05D003528 2.8e-06 56.2 184 32.1
TAR622G0507 Trochodendron aralioides HOM05D003199 ORTHO05D003528 2.8e-06 56.2 38 65.8
Atru.chr6.2549 Acer truncatum HOM05D003199 ORTHO05D003528 4.7e-06 55.5 119 38.7
Atru.chr6.2557 Acer truncatum HOM05D003199 ORTHO05D003528 4.7e-06 55.5 119 38.7
CSS0036982 Camellia sinensis var. sinensis HOM05D003199 ORTHO05D003528 4.7e-06 55.5 114 36.0
Glyma.19G071300 Glycine max HOM05D003199 ORTHO05D003528 4.7e-06 55.5 115 37.4
A09p03290 Brassica napus HOM05D003199 ORTHO05D003528 6.2e-06 55.1 119 36.1
Gorai.012G087400 Gossypium raimondii HOM05D003199 ORTHO05D003528 6.2e-06 55.1 177 32.8
Psat3g169680 Pisum sativum HOM05D003199 ORTHO05D003528 6.2e-06 55.1 87 40.2
AT3G27160 Arabidopsis thaliana HOM05D003199 ORTHO05D003528 8.1e-06 54.7 123 36.6
BcaC03g18193 Brassica carinata HOM05D003199 ORTHO05D003528 8.1e-06 54.7 125 34.4
BolC2t12315H Brassica oleracea HOM05D003199 ORTHO05D003528 8.1e-06 54.7 125 34.4
CiPaw.03G054500 Carya illinoinensis HOM05D003199 ORTHO05D003528 8.1e-06 54.7 107 37.4
Ciclev10016867m.g Citrus clementina HOM05D003199 ORTHO05D003528 8.1e-06 54.7 182 30.2
Gohir.A05G339100 Gossypium hirsutum HOM05D003199 ORTHO05D003528 8.1e-06 54.7 177 32.8
Sp2g16270 Schrenkiella parvula HOM05D003199 ORTHO05D003528 8.1e-06 54.7 122 36.1


User provided reference genes

Program Settings