Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0000041 Sechium edule HOM05D007950 ORTHO05D009951 1.5e-29 132.1 64 100.0
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 4.7e-15 84.0 64 60.9
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 4.7e-15 84.0 64 60.9
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 4.7e-15 84.0 64 60.9
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 1.2e-13 79.3 59 57.6
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 7.5e-13 76.6 58 60.3
Haze_16407 Corylus avellana HOM05D007950 ORTHO05D009951 1.7e-12 75.5 64 54.7
Haze_16408 Corylus avellana HOM05D007950 ORTHO05D009951 1.7e-12 75.5 64 54.7
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 2.2e-12 75.1 60 53.3
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 3.7e-12 74.3 60 53.3
TPR.G24171 Trifolium pratense HOM05D007950 ORTHO05D009951 4.9e-12 73.9 64 53.1
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 8.3e-12 73.2 64 53.1
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 1.1e-11 72.8 58 58.6
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 1.1e-11 72.8 64 53.1
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 1.1e-11 72.8 60 55.0
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 2.4e-11 71.6 59 50.8
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.4e-11 71.6 54 59.3
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 2.4e-11 71.6 60 48.3
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 3.2e-11 71.2 60 56.7
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 3.2e-11 71.2 58 55.2
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 4.1e-11 70.9 60 53.3
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 7.0e-11 70.1 54 57.4
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 9.2e-11 69.7 60 51.7
arahy.Tifrunner.gnm1.ann1.6Z76EK Arachis hypogaea HOM05D007950 ORTHO05D009951 1.2e-10 69.3 66 48.5
Lj3g0016273 Lotus japonicus HOM05D007950 ORTHO05D009951 1.2e-10 69.3 64 48.4
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 1.2e-10 69.3 60 51.7
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 1.2e-10 69.3 59 52.5
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 1.6e-10 68.9 64 53.1
Medtr4g012580 Medicago truncatula HOM05D007950 ORTHO05D009951 1.6e-10 68.9 60 48.3
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 1.6e-10 68.9 57 54.4
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 2.0e-10 68.6 62 51.6
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 2.7e-10 68.2 60 50.0
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 4.6e-10 67.4 64 53.1
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 4.6e-10 67.4 64 53.1
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 4.6e-10 67.4 58 53.4
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 6.0e-10 67.0 60 51.7
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 6.0e-10 67.0 64 48.4
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 7.8e-10 66.6 60 50.0
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 7.8e-10 66.6 60 50.0
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.0e-09 66.2 64 51.6
Phvul.003G020900 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 1.0e-09 66.2 60 50.0
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 1.0e-09 66.2 61 54.1
TPR.G8534 Trifolium pratense HOM05D007950 ORTHO05D009951 1.0e-09 66.2 50 54.0
Phvul.010G150100 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 2.3e-09 65.1 64 46.9
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 3.0e-09 64.7 60 51.7
Glyma.08G206200 Glycine max HOM05D007950 ORTHO05D009951 3.9e-09 64.3 69 46.4
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 6.6e-09 63.5 60 46.7
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 6.6e-09 63.5 59 49.2
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 8.6e-09 63.2 60 50.0
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 8.6e-09 63.2 64 50.0
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 1.1e-08 62.8 58 50.0
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 1.1e-08 62.8 60 45.0
Glyma.07G005901 Glycine max HOM05D000325 ORTHO05D002025 1.1e-08 62.8 59 50.8
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 1.5e-08 62.4 60 46.7
Glyma.09G123700 Glycine max HOM05D007950 ORTHO05D009951 1.9e-08 62.0 60 48.3
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.9e-08 62.0 58 51.7
HanXRQChr09g0275201 Helianthus annuus HOM05D007950 ORTHO05D009951 1.9e-08 62.0 62 50.0
SalBow2G2396 Salvia bowleyana HOM05D007950 ORTHO05D009951 1.9e-08 62.0 53 52.8
Cc04_g03310 Coffea canephora HOM05D007950 ORTHO05D009951 2.5e-08 61.6 54 57.4
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.5e-08 61.6 58 50.0
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 3.3e-08 61.2 60 45.0
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 5.6e-08 60.5 59 50.8
Lalb_Chr04g0262731 Lupinus albus HOM05D007950 ORTHO05D009951 5.6e-08 60.5 64 45.3
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 9.5e-08 59.7 62 46.8
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 9.5e-08 59.7 58 48.3
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 1.2e-07 59.3 61 45.9
TPR.G35274 Trifolium pratense HOM05D007950 ORTHO05D009951 3.6e-07 57.8 57 42.1
Migut.D01581 Erythranthe guttata HOM05D007950 ORTHO05D009951 6.2e-07 57.0 65 44.6
Medtr6g086645 Medicago truncatula HOM05D007950 ORTHO05D009951 1.4e-06 55.8 58 46.6
CDE06G0019 Ceratophyllum demersum HOM05D007950 ORTHO05D009951 4.0e-06 54.3 57 40.4
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 4.0e-06 54.3 57 43.9
Manes.03G020101 Manihot esculenta HOM05D007950 ORTHO05D009951 5.2e-06 53.9 60 41.7
Thhalv10012203m.g Eutrema salsugineum HOM05D007950 ORTHO05D009951 8.9e-06 53.1 57 47.4
FAN05G0591 Fragaria x ananassa HOM05D007950 ORTHO05D009951 8.9e-06 53.1 67 44.8


User provided reference genes

Program Settings