Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc20g0002570 Simmondsia chinensis HOM05D002202 ORTHO05D002176 7.2e-264 913.3 443 100.0
EL10Ac8g20455 Beta vulgaris HOM05D002202 ORTHO05D002176 2.9e-10 70.9 87 39.1
BcaB01g05343 Brassica carinata HOM05D002202 ORTHO05D002176 3.7e-10 70.5 115 36.5
Rhsim09G0163700 Rhododendron simsii HOM05D002202 ORTHO05D002176 8.3e-10 69.3 197 30.5
Actinidia05292 Actinidia chinensis HOM05D004804 ORTHO05D005882 1.9e-09 68.2 87 39.1
Rhsim13G0086300 Rhododendron simsii HOM05D002202 ORTHO05D002176 7.0e-09 66.2 445 22.9
COL.COLO4_14853 Corchorus olitorius HOM05D001217 ORTHO05D001097 1.6e-08 65.1 110 35.5
PGSC0003DMG400047103 Solanum tuberosum HOM05D002202 ORTHO05D002176 1.6e-08 65.1 125 36.0
Nitab4.5_0000766g0100 Nicotiana tabacum HOM05D002202 ORTHO05D002176 2.0e-08 64.7 124 32.3
Migut.E01093 Erythranthe guttata HOM05D002202 ORTHO05D002176 3.5e-08 63.9 156 30.1
Peaxi162Scf00060g00023 Petunia axillaris HOM05D002202 ORTHO05D002176 3.5e-08 63.9 187 28.9
arahy.Tifrunner.gnm1.ann1.ITVB4V Arachis hypogaea HOM05D002202 ORTHO05D002176 4.6e-08 63.5 184 28.8
MSTRG.1867 Avicennia marina HOM05D002202 ORTHO05D002176 1.3e-07 62.0 161 28.6
PGR044G2454 Punica granatum HOM05D002202 ORTHO05D002176 1.3e-07 62.0 200 27.5
COL.COLO4_14950 Corchorus olitorius HOM05D002202 ORTHO05D002176 1.7e-07 61.6 177 28.8
unitig_52.g16841 Utricularia gibba HOM05D002202 ORTHO05D002176 1.7e-07 61.6 199 26.1
CiPaw.09G188200 Carya illinoinensis HOM05D002202 ORTHO05D002176 2.3e-07 61.2 163 29.4
Oeu009162.1 Olea europaea HOM05D002202 ORTHO05D002176 2.3e-07 61.2 144 29.9
Oeu009169.1 Olea europaea HOM05D002202 ORTHO05D002176 2.3e-07 61.2 161 31.7
Hund23830 Selenicereus undatus HOM05D002202 ORTHO05D002176 2.3e-07 61.2 146 30.8
CSS0027045 Camellia sinensis var. sinensis HOM05D002202 ORTHO05D002176 3.0e-07 60.8 109 33.0
Hma1.2p1_0573F.1_g181390 Hydrangea macrophylla HOM05D002202 ORTHO05D002176 3.0e-07 60.8 201 28.4
Haze_20735 Corylus avellana HOM05D002202 ORTHO05D002176 3.9e-07 60.5 149 30.2
Rhsim01G0224700 Rhododendron simsii HOM05D002202 ORTHO05D002176 3.9e-07 60.5 133 33.1
CSS0012088 Camellia sinensis var. sinensis HOM05D001217 ORTHO05D001097 5.0e-07 60.1 75 37.3
CSS0013564 Camellia sinensis var. sinensis HOM05D001217 ORTHO05D001097 5.0e-07 60.1 75 37.3
Ciclev10011464m.g Citrus clementina HOM05D002202 ORTHO05D002176 5.0e-07 60.1 146 28.8
MD12G1138700 Malus domestica HOM05D001217 ORTHO05D001097 6.6e-07 59.7 149 31.5
PGSC0003DMG402030312 Solanum tuberosum HOM05D002202 ORTHO05D002176 6.6e-07 59.7 108 33.3
CSS0012416 Camellia sinensis var. sinensis HOM05D001217 ORTHO05D001097 8.6e-07 59.3 89 36.0
CSS0046989 Camellia sinensis var. sinensis HOM05D002202 ORTHO05D002176 8.6e-07 59.3 110 31.8
Lalb_Chr02g0144071 Lupinus albus HOM05D002202 ORTHO05D002176 8.6e-07 59.3 121 33.9
THA.LOC104799354 Tarenaya hassleriana HOM05D002202 ORTHO05D002176 8.6e-07 59.3 150 30.0
Aqoxy4G00204 Aquilegia oxysepala HOM05D002202 ORTHO05D002176 1.1e-06 58.9 149 28.2
arahy.Tifrunner.gnm1.ann1.88FAZH Arachis hypogaea HOM05D002202 ORTHO05D002176 1.1e-06 58.9 122 33.6
arahy.Tifrunner.gnm1.ann1.VC1WKW Arachis hypogaea HOM05D002202 ORTHO05D002176 1.1e-06 58.9 122 33.6
CSS0011232 Camellia sinensis var. sinensis HOM05D001217 ORTHO05D001097 1.1e-06 58.9 97 35.1
CSS0034963 Camellia sinensis var. sinensis HOM05D001217 ORTHO05D001097 1.1e-06 58.9 97 35.1
Dinv31425 Davidia involucrata HOM05D002202 ORTHO05D002176 1.1e-06 58.9 129 31.0
RcHm_v2.0_Chr1g0366111 Rosa chinensis HOM05D002202 ORTHO05D002176 1.1e-06 58.9 129 31.0
unitig_61.g26349 Utricularia gibba HOM05D002202 ORTHO05D002176 1.1e-06 58.9 107 34.6
Prupe.6G249500 Prunus persica HOM05D002202 ORTHO05D002176 1.5e-06 58.5 143 28.7
PGR142G0844 Punica granatum HOM05D002202 ORTHO05D002176 1.5e-06 58.5 129 30.2
Sabra06G0062500 Salix brachista HOM05D002202 ORTHO05D002176 1.5e-06 58.5 138 31.2
Sed0014441 Sechium edule HOM05D002202 ORTHO05D002176 1.5e-06 58.5 134 29.9
vmacro08674 Vaccinium macrocarpon HOM05D002202 ORTHO05D002176 1.5e-06 58.5 177 27.7
GSVIVG01016599001 Vitis vinifera HOM05D002202 ORTHO05D002176 1.5e-06 58.5 130 30.8
Cpa.g.sc188.21 Carica papaya HOM05D001217 ORTHO05D001097 1.9e-06 58.2 181 30.9
HanXRQChr01g0026621 Helianthus annuus HOM05D002202 ORTHO05D002176 1.9e-06 58.2 157 28.0
Lj3A971T14 Lonicera japonica HOM05D001217 ORTHO05D001097 1.9e-06 58.2 93 34.4
Prupe.2G230700 Prunus persica HOM05D002202 ORTHO05D002176 1.9e-06 58.2 129 31.0
Solyc09g010350.4 Solanum lycopersicum HOM05D002202 ORTHO05D002176 1.9e-06 58.2 110 30.9
Sopen09g005080 Solanum pennellii HOM05D002202 ORTHO05D002176 1.9e-06 58.2 110 30.9
SGA_v2.0_scaffold479G52244 Striga asiatica HOM05D002202 ORTHO05D002176 1.9e-06 58.2 171 30.4
TWI74G1658 Tripterygium wilfordii HOM05D002202 ORTHO05D002176 1.9e-06 58.2 110 30.9
unitig_0.g1228 Utricularia gibba HOM05D002202 ORTHO05D002176 1.9e-06 58.2 245 27.8
Ca_07218_v3 Cicer arietinum L. HOM05D002202 ORTHO05D002176 2.5e-06 57.8 133 30.1
MD01G1123100 Malus domestica HOM05D002202 ORTHO05D002176 2.5e-06 57.8 130 30.8
Peaxi162Scf00604g00424 Petunia axillaris HOM05D001217 ORTHO05D001097 2.5e-06 57.8 67 40.3
Rhsim03G0128600 Rhododendron simsii HOM05D002202 ORTHO05D002176 2.5e-06 57.8 181 30.4
Sopen06g032220 Solanum pennellii HOM05D002202 ORTHO05D002176 2.5e-06 57.8 166 28.9
C03p07140 Brassica napus HOM05D002202 ORTHO05D002176 3.3e-06 57.4 161 29.8
BolC3t13213H Brassica oleracea HOM05D002202 ORTHO05D002176 3.3e-06 57.4 161 29.8
ClCG07G003180 Citrullus lanatus HOM05D002202 ORTHO05D002176 3.3e-06 57.4 173 27.7
Hma1.2p1_0624F.1_g191270 Hydrangea macrophylla HOM05D002202 ORTHO05D002176 3.3e-06 57.4 438 21.9
SalBow1G3066 Salvia bowleyana HOM05D002202 ORTHO05D002176 3.3e-06 57.4 174 28.2
Solyc06g075790.3 Solanum lycopersicum HOM05D002202 ORTHO05D002176 3.3e-06 57.4 166 28.9
AL4G34010 Arabidopsis lyrata HOM05D001217 ORTHO05D001097 4.3e-06 57.0 73 39.7
DCAR_020854 Daucus carota HOM05D002202 ORTHO05D002176 4.3e-06 57.0 172 32.0
Lj2A100G74 Lonicera japonica HOM05D002202 ORTHO05D002176 4.3e-06 57.0 148 26.4
Nitab4.5_0002655g0080 Nicotiana tabacum HOM05D002202 ORTHO05D002176 4.3e-06 57.0 86 36.0
Psat3g184160 Pisum sativum HOM05D002202 ORTHO05D002176 4.3e-06 57.0 129 31.0
QL07p046827 Quercus lobata HOM05D002202 ORTHO05D002176 4.3e-06 57.0 151 28.5
QL07p046978 Quercus lobata HOM05D002202 ORTHO05D002176 4.3e-06 57.0 151 28.5
Sabra10G0161700 Salix brachista HOM05D002202 ORTHO05D002176 4.3e-06 57.0 128 32.0
Sp6g30360 Schrenkiella parvula HOM05D002202 ORTHO05D002176 4.3e-06 57.0 118 33.1
Solyc10g084650.3 Solanum lycopersicum HOM05D001217 ORTHO05D001097 4.3e-06 57.0 67 40.3
Sopen10g034090 Solanum pennellii HOM05D001217 ORTHO05D001097 4.3e-06 57.0 67 40.3
BraA03t09945Z Brassica rapa HOM05D002202 ORTHO05D002176 5.6e-06 56.6 180 28.9
Carub.0005s2026 Capsella rubella HOM05D001217 ORTHO05D001097 5.6e-06 56.6 186 28.5
Gohir.A13G090300 Gossypium hirsutum HOM05D002202 ORTHO05D002176 5.6e-06 56.6 148 27.0
Gohir.D13G020800 Gossypium hirsutum HOM05D002202 ORTHO05D002176 5.6e-06 56.6 84 35.7
Gorai.013G023200 Gossypium raimondii HOM05D002202 ORTHO05D002176 5.6e-06 56.6 84 35.7
MD07G1192800 Malus domestica HOM05D002202 ORTHO05D002176 5.6e-06 56.6 129 31.0
Peaxi162Scf00039g01013 Petunia axillaris HOM05D002202 ORTHO05D002176 5.6e-06 56.6 145 29.0
Phvul.008G014500 Phaseolus vulgaris HOM05D002202 ORTHO05D002176 5.6e-06 56.6 154 29.2
Sp4g19790 Schrenkiella parvula HOM05D002202 ORTHO05D002176 5.6e-06 56.6 143 30.8
TPR.G15488 Trifolium pratense HOM05D002202 ORTHO05D002176 5.6e-06 56.6 129 30.2
TWI77G0016 Tripterygium wilfordii HOM05D002202 ORTHO05D002176 5.6e-06 56.6 147 28.6
Atru.chr8.1925 Acer truncatum HOM05D002202 ORTHO05D002176 7.3e-06 56.2 146 28.1
Actinidia37235 Actinidia chinensis HOM05D002202 ORTHO05D002176 7.3e-06 56.2 215 27.0
Aa31sc144G50 Aethionema arabicum HOM05D002202 ORTHO05D002176 7.3e-06 56.2 254 25.6
Aqoxy2G02019 Aquilegia oxysepala HOM05D002202 ORTHO05D002176 7.3e-06 56.2 180 27.2
CSS0021223 Camellia sinensis var. sinensis HOM05D002202 ORTHO05D002176 7.3e-06 56.2 129 29.5
Cc06_g02940 Coffea canephora HOM05D001217 ORTHO05D001097 7.3e-06 56.2 103 34.0
COL.COLO4_14863 Corchorus olitorius HOM05D002202 ORTHO05D002176 7.3e-06 56.2 138 29.7
MELO3C023841.2 Cucumis melo HOM05D002202 ORTHO05D002176 7.3e-06 56.2 166 28.3
Lj8A88T25 Lonicera japonica HOM05D002202 ORTHO05D002176 7.3e-06 56.2 65 43.1
Nitab4.5_0000202g0190 Nicotiana tabacum HOM05D001217 ORTHO05D001097 7.3e-06 56.2 67 38.8
Nitab4.5_0000216g0070 Nicotiana tabacum HOM05D001217 ORTHO05D001097 7.3e-06 56.2 67 38.8
QL08p058772 Quercus lobata HOM05D002202 ORTHO05D002176 7.3e-06 56.2 129 30.2
Thecc.05G044100 Theobroma cacao HOM05D001217 ORTHO05D001097 7.3e-06 56.2 87 36.8
TAR623G0233 Trochodendron aralioides HOM05D002202 ORTHO05D002176 7.3e-06 56.2 150 29.3
TAR633G0134 Trochodendron aralioides HOM05D002202 ORTHO05D002176 7.3e-06 56.2 68 39.7
Actinidia13121 Actinidia chinensis HOM05D002202 ORTHO05D002176 9.5e-06 55.8 65 40.0
BcaC02g11854 Brassica carinata HOM05D000296 ORTHO05D000175 9.5e-06 55.8 144 30.6
A03p06130 Brassica napus HOM05D002202 ORTHO05D002176 9.5e-06 55.8 180 28.9
CSS0015931 Camellia sinensis var. sinensis HOM05D002202 ORTHO05D002176 9.5e-06 55.8 134 29.1
Carub.0006s1182 Capsella rubella HOM05D002202 ORTHO05D002176 9.5e-06 55.8 133 33.1
CAN.G688.7 Capsicum annuum HOM05D001217 ORTHO05D001097 9.5e-06 55.8 69 39.1
Cpa.g.sc1.360 Carica papaya HOM05D002202 ORTHO05D002176 9.5e-06 55.8 144 30.6
Dinv32852 Davidia involucrata HOM05D002202 ORTHO05D002176 9.5e-06 55.8 180 27.2
Eucgr.K03169 Eucalyptus grandis HOM05D002202 ORTHO05D002176 9.5e-06 55.8 154 29.2
FAN09G4829 Fragaria x ananassa HOM05D002202 ORTHO05D002176 9.5e-06 55.8 149 28.9
FAN14G4434 Fragaria x ananassa HOM05D002202 ORTHO05D002176 9.5e-06 55.8 149 28.2
Lalb_Chr10g0091821 Lupinus albus HOM05D002202 ORTHO05D002176 9.5e-06 55.8 129 31.8
Nitab4.5_0008142g0050 Nicotiana tabacum HOM05D002202 ORTHO05D002176 9.5e-06 55.8 65 38.5
Nitab4.5_0011862g0030 Nicotiana tabacum HOM05D002202 ORTHO05D002176 9.5e-06 55.8 65 38.5
Oeu051441.1 Olea europaea HOM05D002202 ORTHO05D002176 9.5e-06 55.8 178 27.5


User provided reference genes

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