Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc16g0000320 Simmondsia chinensis HOM05D007989 ORTHO05D010087 2.0e-71 272.3 139 100.0
CiPaw.03G146300 Carya illinoinensis HOM05D007989 ORTHO05D010087 4.0e-19 98.6 134 44.8
QL06p047951 Quercus lobata HOM05D007989 ORTHO05D010087 4.0e-19 98.6 142 41.5
Cfa002588 Carpinus fangiana HOM05D007989 ORTHO05D010087 1.1e-16 90.5 136 41.9
Haze_24825 Corylus avellana HOM05D007989 ORTHO05D010087 2.4e-16 89.4 137 43.1
Haze_24830 Corylus avellana HOM05D007989 ORTHO05D010087 2.4e-16 89.4 137 43.1
Nn1g05466 Nelumbo nucifera HOM05D007989 ORTHO05D010087 5.4e-16 88.2 125 42.4
CiPaw.04G104100 Carya illinoinensis HOM05D007989 ORTHO05D010087 1.6e-15 86.7 146 39.0
Dinv08871 Davidia involucrata HOM05D007989 ORTHO05D010087 2.1e-15 86.3 139 38.8
Prupe.6G193900 Prunus persica HOM05D007989 ORTHO05D010087 7.8e-15 84.3 141 40.4
Thecc.01G095100 Theobroma cacao HOM05D007989 ORTHO05D010087 1.3e-14 83.6 122 40.2
COL.COLO4_27300 Corchorus olitorius HOM05D007989 ORTHO05D010087 1.7e-14 83.2 140 38.6
EL10Ac6g14814 Beta vulgaris HOM05D007989 ORTHO05D010087 3.0e-14 82.4 127 42.5
Duzib147G0239 Durio zibethinus HOM05D007989 ORTHO05D010087 3.0e-14 82.4 140 35.7
TWI53G0073 Tripterygium wilfordii HOM05D007989 ORTHO05D010087 3.9e-14 82.0 133 36.8
PSO675G2967 Papaver somniferum HOM05D007989 ORTHO05D010087 8.7e-14 80.9 145 36.6
Aqoxy6G00707 Aquilegia oxysepala HOM05D007989 ORTHO05D010087 1.1e-13 80.5 140 38.6
MD01G1036700 Malus domestica HOM05D007989 ORTHO05D010087 1.1e-13 80.5 121 40.5
MD15G1317900 Malus domestica HOM05D007989 ORTHO05D010087 3.3e-13 79.0 141 39.7
PSO541G3922 Papaver somniferum HOM05D007989 ORTHO05D010087 5.6e-13 78.2 141 36.9
arahy.Tifrunner.gnm1.ann1.92LXSJ Arachis hypogaea HOM05D007989 ORTHO05D010087 7.3e-13 77.8 112 43.8
MBI06_g03317_MAGBIO Magnolia biondii HOM05D007989 ORTHO05D010087 1.3e-12 77.0 135 38.5
Manes.13G097300 Manihot esculenta HOM05D007989 ORTHO05D010087 1.3e-12 77.0 140 40.7
Oeu002158.1 Olea europaea HOM05D007989 ORTHO05D010087 1.6e-12 76.6 120 39.2
Ciclev10026467m.g Citrus clementina HOM05D007989 ORTHO05D010087 2.1e-12 76.3 104 43.3
Medtr3g086760 Medicago truncatula HOM05D007989 ORTHO05D010087 2.8e-12 75.9 139 38.8
TAR628G0250 Trochodendron aralioides HOM05D007989 ORTHO05D010087 8.1e-12 74.3 132 37.9
arahy.Tifrunner.gnm1.ann1.FU6RJX Arachis hypogaea HOM05D007989 ORTHO05D010087 1.1e-11 73.9 114 43.0
TPR.G30536 Trifolium pratense HOM05D007989 ORTHO05D010087 1.1e-11 73.9 143 38.5
AUR62027199 Chenopodium quinoa HOM05D007989 ORTHO05D010087 1.4e-11 73.6 122 41.0
CAN.G905.6 Capsicum annuum HOM05D007989 ORTHO05D010087 2.4e-11 72.8 137 36.5
Glyma.18G014700 Glycine max HOM05D007989 ORTHO05D010087 2.4e-11 72.8 142 37.3
Potri.005G071400 Populus trichocarpa HOM05D007989 ORTHO05D010087 3.1e-11 72.4 141 36.9
Ca_16505_v3 Cicer arietinum L. HOM05D007989 ORTHO05D010087 4.0e-11 72.0 127 37.8
Ca_30637_v3 Cicer arietinum L. HOM05D007989 ORTHO05D010087 4.0e-11 72.0 127 37.8
RcHm_v2.0_Chr2g0112271 Rosa chinensis HOM05D007989 ORTHO05D010087 4.0e-11 72.0 142 34.5
CANSAT01G0464 Cannabis sativa HOM05D007989 ORTHO05D010087 5.3e-11 71.6 135 38.5
Gohir.A02G130000 Gossypium hirsutum HOM05D007989 ORTHO05D010087 5.3e-11 71.6 125 36.8
Gohir.D03G040900 Gossypium hirsutum HOM05D007989 ORTHO05D010087 5.3e-11 71.6 125 36.8
Gorai.003G041700 Gossypium raimondii HOM05D007989 ORTHO05D010087 5.3e-11 71.6 125 36.8
Nitab4.5_0005930g0030 Nicotiana tabacum HOM05D007989 ORTHO05D010087 6.9e-11 71.2 138 37.0
Migut.H02322 Erythranthe guttata HOM05D007989 ORTHO05D010087 2.0e-10 69.7 118 39.8
Cpa.g.sc55.66 Carica papaya HOM05D007989 ORTHO05D010087 4.4e-10 68.6 129 35.7
Sabra05G0058400 Salix brachista HOM05D007989 ORTHO05D010087 4.4e-10 68.6 135 38.5
Atru.chr3.1338 Acer truncatum HOM05D007989 ORTHO05D010087 5.8e-10 68.2 123 35.8
FvH4_1g20210 Fragaria vesca HOM05D007989 ORTHO05D010087 5.8e-10 68.2 144 34.7
FAN19G2348 Fragaria x ananassa HOM05D007989 ORTHO05D010087 7.6e-10 67.8 144 34.7
Rhsim10G0168900 Rhododendron simsii HOM05D007989 ORTHO05D010087 7.6e-10 67.8 90 43.3
vmacro12990 Vaccinium macrocarpon HOM05D007989 ORTHO05D010087 7.6e-10 67.8 76 44.7
Glyma.11G242400 Glycine max HOM05D007989 ORTHO05D010087 9.9e-10 67.4 81 49.4
FAN23G0861 Fragaria x ananassa HOM05D007989 ORTHO05D010087 1.3e-09 67.0 144 34.0
Lj6g0026253 Lotus japonicus HOM05D007989 ORTHO05D010087 1.3e-09 67.0 65 55.4
FAN26G0087 Fragaria x ananassa HOM05D007989 ORTHO05D010087 4.9e-09 65.1 144 33.3
Nitab4.5_0000241g0120 Nicotiana tabacum HOM05D007989 ORTHO05D010087 4.9e-09 65.1 137 34.3
Psat1g083960 Pisum sativum HOM05D007989 ORTHO05D010087 4.9e-09 65.1 107 39.3
Sopen11g005100 Solanum pennellii HOM05D007989 ORTHO05D010087 6.4e-09 64.7 119 32.8
Solyc11g010320.1 Solanum lycopersicum HOM05D007989 ORTHO05D010087 1.1e-08 63.9 135 33.3
ClCG10G008400 Citrullus lanatus HOM05D007989 ORTHO05D010087 1.4e-08 63.5 65 52.3
Phvul.001G254200 Phaseolus vulgaris HOM05D007989 ORTHO05D010087 1.4e-08 63.5 144 36.1
Sabra07G0080700 Salix brachista HOM05D007989 ORTHO05D010087 1.4e-08 63.5 140 35.7
VMungo1383G0535 Vigna mungo HOM05D007989 ORTHO05D010087 1.4e-08 63.5 150 34.7
Potri.007G097400 Populus trichocarpa HOM05D007989 ORTHO05D010087 3.2e-08 62.4 135 32.6
PGSC0003DMG401016146 Solanum tuberosum HOM05D007989 ORTHO05D010087 3.2e-08 62.4 120 35.0
Sed0027218 Sechium edule HOM05D007989 ORTHO05D010087 4.2e-08 62.0 76 47.4
Actinidia06535 Actinidia chinensis HOM05D007989 ORTHO05D010087 9.3e-08 60.8 76 43.4
FAN28G0040 Fragaria x ananassa HOM05D007989 ORTHO05D010087 1.2e-07 60.5 131 33.6
CsaV3_4G009020 Cucumis sativus L. HOM05D007989 ORTHO05D010087 2.1e-07 59.7 115 33.0
MELO3C018999.2 Cucumis melo HOM05D007989 ORTHO05D010087 2.7e-07 59.3 115 32.2
Hma1.2p1_0019F.1_g013880 Hydrangea macrophylla HOM05D007989 ORTHO05D010087 4.6e-07 58.5 81 40.7
PGR004G2401 Punica granatum HOM05D007989 ORTHO05D010087 1.0e-06 57.4 119 37.8


User provided reference genes

Program Settings