Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0006080 Simmondsia chinensis HOM05D006206 ORTHO05D007524 6.1e-82 307.4 148 100.0
Sc04g0008850 Simmondsia chinensis HOM05D006206 ORTHO05D007524 4.2e-43 178.3 129 69.8
AUR62026576 Chenopodium quinoa HOM05D006206 ORTHO05D007524 2.2e-31 139.4 141 54.6
Ah.03g132340 Amaranthus hybridus HOM05D006206 ORTHO05D007524 1.4e-30 136.7 142 51.4
TWI36G0869 Tripterygium wilfordii HOM05D006206 ORTHO05D007524 2.4e-30 136.0 146 48.6
AUR62039409 Chenopodium quinoa HOM05D006206 ORTHO05D007524 4.1e-30 135.2 141 53.2
GSVIVG01020175001 Vitis vinifera HOM05D006206 ORTHO05D007524 4.1e-30 135.2 142 50.7
EL10Ac6g13728 Beta vulgaris HOM05D006206 ORTHO05D007524 9.2e-30 134.0 101 65.3
CSS0017859 Camellia sinensis var. sinensis HOM05D006206 ORTHO05D007524 2.7e-29 132.5 101 61.4
Cfa009101 Carpinus fangiana HOM05D006206 ORTHO05D007524 3.5e-29 132.1 142 48.6
Haze_12136 Corylus avellana HOM05D006206 ORTHO05D007524 3.5e-29 132.1 142 48.6
QL03p062735 Quercus lobata HOM05D006206 ORTHO05D007524 6.0e-29 131.3 142 48.6
Oeu028549.1 Olea europaea HOM05D006206 ORTHO05D007524 2.3e-28 129.4 141 49.6
Thecc.02G242300 Theobroma cacao HOM05D006206 ORTHO05D007524 3.0e-28 129.0 101 61.4
Rhsim12G0124500 Rhododendron simsii HOM05D006206 ORTHO05D007524 8.6e-28 127.5 142 47.9
CANSAT01G1397 Cannabis sativa HOM05D006206 ORTHO05D007524 1.1e-27 127.1 129 51.9
CAN.G1160.6 Capsicum annuum HOM05D006206 ORTHO05D007524 1.1e-27 127.1 101 62.4
Hund05953 Selenicereus undatus HOM05D006206 ORTHO05D007524 1.1e-27 127.1 103 60.2
FvH4_4g35040 Fragaria vesca HOM05D006206 ORTHO05D007524 1.9e-27 126.3 131 47.3
FAN12G4309 Fragaria x ananassa HOM05D006206 ORTHO05D007524 1.9e-27 126.3 131 47.3
Solyc05g006130.4 Solanum lycopersicum HOM05D006206 ORTHO05D007524 1.9e-27 126.3 101 63.4
Sopen05g002150 Solanum pennellii HOM05D006206 ORTHO05D007524 1.9e-27 126.3 101 63.4
DCAR_007104 Daucus carota HOM05D006206 ORTHO05D007524 2.5e-27 125.9 137 54.0
FAN22G1605 Fragaria x ananassa HOM05D006206 ORTHO05D007524 2.5e-27 125.9 131 46.6
TAR629G3093 Trochodendron aralioides HOM05D006206 ORTHO05D007524 2.5e-27 125.9 130 53.1
vmacro16281 Vaccinium macrocarpon HOM05D006206 ORTHO05D007524 4.3e-27 125.2 100 59.0
Atru.chr11.1959 Acer truncatum HOM05D006206 ORTHO05D007524 5.6e-27 124.8 129 50.4
Lj6A801T77 Lonicera japonica HOM05D006206 ORTHO05D007524 7.3e-27 124.4 101 59.4
MELO3C012026.2 Cucumis melo HOM05D006206 ORTHO05D007524 1.2e-26 123.6 130 50.8
Peaxi162Scf00421g00830 Petunia axillaris HOM05D006206 ORTHO05D007524 1.2e-26 123.6 99 62.6
CsaV3_5G031890 Cucumis sativus L. HOM05D006206 ORTHO05D007524 1.6e-26 123.2 136 50.0
Hma1.2p1_1049F.1_g251740 Hydrangea macrophylla HOM05D006206 ORTHO05D007524 1.6e-26 123.2 129 51.2
Hma1.2p1_1049F.1_g251750 Hydrangea macrophylla HOM05D006206 ORTHO05D007524 1.6e-26 123.2 129 51.2
Manes.05G090900 Manihot esculenta HOM05D006206 ORTHO05D007524 1.6e-26 123.2 129 50.4
FAN17G1045 Fragaria x ananassa HOM05D006206 ORTHO05D007524 2.1e-26 122.9 130 46.9
Nitab4.5_0000257g0190 Nicotiana tabacum HOM05D006206 ORTHO05D007524 2.8e-26 122.5 101 60.4
RcHm_v2.0_Chr4g0444581 Rosa chinensis HOM05D006206 ORTHO05D007524 2.8e-26 122.5 130 46.9
Actinidia15005 Actinidia chinensis HOM05D006206 ORTHO05D007524 4.7e-26 121.7 129 49.6
MBI14_g29844_MAGBIO Magnolia biondii HOM05D006206 ORTHO05D007524 4.7e-26 121.7 142 45.8
PGR102G3165 Punica granatum HOM05D006206 ORTHO05D007524 4.7e-26 121.7 148 47.3
Cpa.g.sc5.343 Carica papaya HOM05D006206 ORTHO05D007524 8.0e-26 120.9 101 56.4
ClCG05G025010 Citrullus lanatus HOM05D006206 ORTHO05D007524 1.8e-25 119.8 130 49.2
Dinv24904 Davidia involucrata HOM05D006206 ORTHO05D007524 1.8e-25 119.8 130 50.8
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 1.8e-25 119.8 106 60.4
Gorai.005G186000 Gossypium raimondii HOM05D006206 ORTHO05D007524 3.1e-25 119.0 129 51.2
ATR1149G044 Amborella trichopoda HOM05D006206 ORTHO05D007524 4.0e-25 118.6 130 47.7
Thhalv10023381m.g Eutrema salsugineum HOM05D006206 ORTHO05D007524 4.0e-25 118.6 141 44.7
Aa31LG2G10240 Aethionema arabicum HOM05D006206 ORTHO05D007524 5.2e-25 118.2 141 45.4
Gohir.D02G165900 Gossypium hirsutum HOM05D006206 ORTHO05D007524 8.9e-25 117.5 101 58.4
COL.COLO4_26813 Corchorus olitorius HOM05D006206 ORTHO05D007524 1.2e-24 117.1 129 49.6
Sed0009147 Sechium edule HOM05D006206 ORTHO05D007524 1.2e-24 117.1 101 57.4
Carub.0002s0525 Capsella rubella HOM05D006206 ORTHO05D007524 1.5e-24 116.7 141 45.4
MD13G1086600 Malus domestica HOM05D006206 ORTHO05D007524 1.5e-24 116.7 132 45.5
MSTRG.623 Avicennia marina HOM05D006206 ORTHO05D007524 2.6e-24 115.9 96 56.2
Lsat_1_v5_gn_8_160361 Lactuca sativa HOM05D006206 ORTHO05D007524 3.4e-24 115.5 131 52.7
AL2G16710 Arabidopsis lyrata HOM05D006206 ORTHO05D007524 5.8e-24 114.8 141 44.0
Gohir.A03G142600 Gossypium hirsutum HOM05D006206 ORTHO05D007524 5.8e-24 114.8 96 59.4
SGA_v2.0_scaffold166G38337 Striga asiatica HOM05D006206 ORTHO05D007524 5.8e-24 114.8 101 57.4
Aqoxy3G00902 Aquilegia oxysepala HOM05D006206 ORTHO05D007524 7.5e-24 114.4 129 49.6
Sp2g04610 Schrenkiella parvula HOM05D006206 ORTHO05D007524 9.8e-24 114.0 141 44.7
Eucgr.B03365 Eucalyptus grandis HOM05D006206 ORTHO05D007524 1.3e-23 113.6 136 45.6
Lsat_1_v5_gn_5_48201 Lactuca sativa HOM05D006206 ORTHO05D007524 1.7e-23 113.2 101 59.4
BcaB04g20241 Brassica carinata HOM05D006206 ORTHO05D007524 2.2e-23 112.8 142 44.4
CARHR052990 Cardamine hirsuta HOM05D006206 ORTHO05D007524 2.2e-23 112.8 142 43.7
PSO478G2501 Papaver somniferum HOM05D006206 ORTHO05D007524 3.7e-23 112.1 134 46.3
AT1G59990 Arabidopsis thaliana HOM05D006206 ORTHO05D007524 4.9e-23 111.7 141 42.6
MD16G1086500 Malus domestica HOM05D006206 ORTHO05D007524 1.1e-22 110.5 140 42.9
Lalb_Chr05g0228071 Lupinus albus HOM05D006206 ORTHO05D007524 1.4e-22 110.2 100 52.0
SalBow2G1769 Salvia bowleyana HOM05D006206 ORTHO05D007524 1.4e-22 110.2 127 48.8
Migut.L01448 Erythranthe guttata HOM05D006206 ORTHO05D007524 1.9e-22 109.8 127 50.4
Glyma.18G132200 Glycine max HOM05D006206 ORTHO05D007524 1.9e-22 109.8 101 51.5
Lsat_1_v5_gn_3_126220 Lactuca sativa HOM05D006206 ORTHO05D007524 1.9e-22 109.8 103 56.3
C01p36700 Brassica napus HOM05D006206 ORTHO05D007524 2.4e-22 109.4 141 43.3
BolC1t03630H Brassica oleracea HOM05D006206 ORTHO05D007524 2.4e-22 109.4 141 43.3
BraA01t03005Z Brassica rapa HOM05D006206 ORTHO05D007524 2.4e-22 109.4 141 43.3
Zm00001eb311790 Zea mays HOM05D006206 ORTHO05D007524 3.2e-22 109.0 131 42.7
BcaC09g49445 Brassica carinata HOM05D006206 ORTHO05D007524 4.1e-22 108.6 141 43.3
CiPaw.06G075000 Carya illinoinensis HOM05D006206 ORTHO05D007524 4.1e-22 108.6 101 52.5
Os09g0383400 Oryza sativa ssp. japonica HOM05D006206 ORTHO05D007524 5.4e-22 108.2 142 45.1
Prupe.1G260000 Prunus persica HOM05D006206 ORTHO05D007524 5.4e-22 108.2 138 44.2
A01p28970 Brassica napus HOM05D006206 ORTHO05D007524 7.0e-22 107.8 141 42.6
HanXRQChr12g0371341 Helianthus annuus HOM05D006206 ORTHO05D007524 9.2e-22 107.5 105 53.3
PSO161G0098 Papaver somniferum HOM05D006206 ORTHO05D007524 9.2e-22 107.5 145 43.4
arahy.Tifrunner.gnm1.ann1.C2AND5 Arachis hypogaea HOM05D006206 ORTHO05D007524 2.7e-21 105.9 107 48.6
arahy.Tifrunner.gnm1.ann1.SG6L8L Arachis hypogaea HOM05D006206 ORTHO05D007524 3.5e-21 105.5 107 47.7
Cc11_g14220 Coffea canephora HOM05D006206 ORTHO05D007524 3.5e-21 105.5 105 52.4
Glyma.08G291800 Glycine max HOM05D000001 ORTHO05D007524 3.5e-21 105.5 101 49.5
Sabra08G0147300 Salix brachista HOM05D006206 ORTHO05D007524 4.6e-21 105.1 101 52.5
Potri.008G193800 Populus trichocarpa HOM05D006206 ORTHO05D007524 7.8e-21 104.4 101 52.5
SalBow2G1590 Salvia bowleyana HOM05D006206 ORTHO05D007524 7.8e-21 104.4 125 48.0
BcaC02g10679 Brassica carinata HOM05D006206 ORTHO05D007524 1.7e-20 103.2 106 50.0
Medtr8g062720 Medicago truncatula HOM05D006206 ORTHO05D007524 2.3e-20 102.8 102 50.0
ECA236G3585 Erigeron canadensis HOM05D000835 ORTHO05D002122 6.6e-20 101.3 105 54.3
Phvul.003G055400 Phaseolus vulgaris HOM05D006206 ORTHO05D007524 6.6e-20 101.3 101 50.5
Psat4g126720 Pisum sativum HOM05D006206 ORTHO05D007524 8.6e-20 100.9 103 46.6
C05p51360 Brassica napus HOM05D006206 ORTHO05D007524 1.1e-19 100.5 141 41.1
HPP92_017065 Vanilla planifolia HOM05D006206 ORTHO05D007524 1.5e-19 100.1 129 45.0
VMungo0251G0739 Vigna mungo HOM05D006206 ORTHO05D007524 2.5e-19 99.4 101 48.5
Ca_22786_v3 Cicer arietinum L. HOM05D006206 ORTHO05D007524 5.6e-19 98.2 102 46.1
Lj3g0001155 Lotus japonicus HOM05D006206 ORTHO05D007524 7.3e-19 97.8 100 49.0
VMungo1127G0223 Vigna mungo HOM05D011504 ORTHO05D007524 1.6e-18 96.7 101 47.5
TPR.G21824 Trifolium pratense HOM05D006206 ORTHO05D007524 2.8e-18 95.9 143 37.1
CDE06G1854 Ceratophyllum demersum HOM05D006206 ORTHO05D007524 3.6e-18 95.5 146 40.4
SEGI_02376 Sequoiadendron giganteum HOM05D006206 ORTHO05D007524 2.3e-17 92.8 102 47.1
unitig_578.g16052 Utricularia gibba HOM05D006206 ORTHO05D007524 3.1e-17 92.4 100 47.0
Ciclev10031062m.g Citrus clementina HOM05D006206 ORTHO05D007524 1.2e-16 90.5 101 47.5
Mapoly0046s0081 Marchantia polymorpha HOM05D006206 ORTHO05D007524 1.4e-14 83.6 101 40.6
Pp3c13_7380 Physcomitrium patens HOM05D006206 ORTHO05D007524 4.1e-14 82.0 99 44.4
AagrBONN_evm.TU.Sc2ySwM_228.4610 Anthoceros agrestis HOM05D006206 ORTHO05D007524 3.0e-12 75.9 140 32.9
SMO340G0173 Selaginella moellendorffii HOM05D006206 ORTHO05D007524 3.3e-11 72.4 96 36.5
CBR_g29762 Chara braunii HOM05D006206 ORTHO05D007524 3.8e-07 58.9 144 28.5
CBR_g3143 Chara braunii HOM05D006206 ORTHO05D007524 8.4e-07 57.8 155 27.7
PRCOL_00004203 Prasinoderma coloniale HOM05D006206 ORTHO05D007524 2.4e-06 56.2 97 32.0
Cre03.g166650 Chlamydomonas reinhardtii HOM05D006206 ORTHO05D007524 9.2e-06 54.3 103 35.9


User provided reference genes

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