Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0002490 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-133 479.6 251 100.0
Sc24g0001190 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.8e-41 171.4 121 66.1
Sc05g0005690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-37 160.6 112 74.1
Sc17g0003520 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.5e-37 159.5 117 65.0
Sc13g0007430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.9e-37 158.7 121 62.8
Sc02g0004970 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.2e-35 152.9 120 61.7
Sc12g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.7e-34 149.1 121 58.7
Sc08g0005440 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.8e-33 145.2 111 64.0
Sc03g0004300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.7e-32 142.1 112 66.1
Sc07g0004510 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.3e-31 138.3 118 60.2
Sc11g0004150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-30 137.5 106 64.2
Sc05g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.1e-30 136.3 106 63.2
Sc06g0004250 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.0e-28 131.3 112 59.8
Sc24g0001130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.2e-27 126.3 113 55.8
Sc17g0003150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.2e-27 125.2 148 46.6
Sc02g0004980 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-26 123.6 90 67.8
Sc23g0003790 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-26 123.6 112 58.0
Sc05g0005050 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.0e-25 121.3 82 70.7
Sc15g0002320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.8e-25 120.6 137 48.9
Sc22g0004320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.0e-25 119.8 122 54.1
Sc21g0003860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.0e-24 117.1 120 54.2
Sc03g0005210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.6e-24 116.7 112 50.0
Sc13g0008210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.6e-24 116.7 221 38.9
Sc01g0005460 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.4e-24 116.3 97 63.9
Sc01g0006550 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.4e-24 116.3 113 56.6
Sc17g0003130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.9e-23 112.5 107 52.3
Sc22g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-22 111.3 85 67.1
Sc20g0002780 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.2e-22 108.2 82 67.1
Sc04g0004840 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-21 107.5 98 54.1
Sc18g0005300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-21 107.5 103 54.4
Sc05g0004430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.9e-21 105.5 76 67.1
Sc24g0001220 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.7e-20 104.0 95 55.8
Sc14g0004880 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.8e-20 102.8 79 65.8
Sc02g0004890 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-19 101.3 82 63.4
Sc02g0005270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.9e-19 100.5 82 61.0
Sc22g0004420 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.3e-19 99.8 82 61.0
Sc02g0005760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.6e-19 99.0 189 38.1
Sc26g0003020 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.1e-18 95.5 82 56.1
Sc01g0006390 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.3e-17 93.6 68 63.2
Sc12g0008150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.3e-17 93.6 191 37.7
Sc02g0004810 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.0e-17 92.8 95 50.5
Sc02g0004160 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.8e-17 92.0 64 59.4
Sc08g0004760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.8e-17 92.0 72 58.3
Sc17g0002860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-16 90.9 95 51.6
Sc17g0003650 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.7e-16 89.0 73 57.5
Sc10g0007130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.5e-16 88.6 103 49.5
Sc02g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-15 87.8 70 67.1
Sc07g0005080 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.9e-15 86.7 69 62.3
Sc05g0004680 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-14 84.7 70 55.7
Sc01g0006690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-13 81.3 61 67.2
Sc08g0005480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-13 81.3 55 63.6
Sc10g0007340 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.6e-13 79.3 65 56.9
Sabra13G0012400 Salix brachista HOM05D020966 ORTHO05D010251 1.2e-10 71.2 79 45.6
Sc11g0004200 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.8e-09 67.4 57 57.9
EL10Ac2g03892 Beta vulgaris HOM05D020966 ORTHO05D023391 7.5e-08 62.0 92 38.0
Sc05g0004290 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.8e-08 61.6 75 48.0
AUR62009156 Chenopodium quinoa HOM05D020966 ORTHO05D023391 1.7e-07 60.8 92 39.1
Peaxi162Scf00820g00117 Petunia axillaris HOM05D008778 ORTHO05D003639 3.7e-07 59.7 95 34.7
AUR62022070 Chenopodium quinoa HOM05D020966 ORTHO05D023391 4.9e-07 59.3 92 38.0
Ah.11g044760 Amaranthus hybridus HOM05D020966 ORTHO05D023391 8.3e-07 58.5 91 37.4
RcHm_v2.0_Chr5g0004321 Rosa chinensis HOM05D008702 ORTHO05D003639 2.4e-06 57.0 75 37.3
RcHm_v2.0_Chr2g0116581 Rosa chinensis HOM05D008702 ORTHO05D003639 3.2e-06 56.6 75 40.0
RcHm_v2.0_Chr2g0142701 Rosa chinensis HOM05D008702 ORTHO05D003639 3.2e-06 56.6 75 40.0
RcHm_v2.0_Chr6g0249161 Rosa chinensis HOM05D008702 ORTHO05D003639 3.2e-06 56.6 75 40.0
Sc03g0004870 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.2e-06 56.6 54 50.0
MELO3C018073.2 Cucumis melo HOM05D001371 ORTHO05D001319 4.1e-06 56.2 91 38.5
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 4.1e-06 56.2 76 39.5
RcHm_v2.0_Chr2g0121071 Rosa chinensis HOM05D008702 ORTHO05D003639 4.1e-06 56.2 75 40.0
Peaxi162Scf00820g00119 Petunia axillaris HOM05D008778 ORTHO05D003639 5.4e-06 55.8 76 39.5
RcHm_v2.0_Chr2g0138191 Rosa chinensis HOM05D008702 ORTHO05D003639 5.4e-06 55.8 75 40.0
RcHm_v2.0_Chr2g0152981 Rosa chinensis HOM05D008702 ORTHO05D003639 5.4e-06 55.8 74 40.5
Sopen00g007290 Solanum pennellii HOM05D008778 ORTHO05D003639 7.0e-06 55.5 109 31.2
Sopen00g002430 Solanum pennellii HOM05D008778 ORTHO05D003639 9.2e-06 55.1 109 31.2


User provided reference genes

Program Settings