Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc12g0011310 Simmondsia chinensis HOM05D000177 ORTHO05D050639 8.1e-48 193.4 94 100.0
GSVIVG01029555001 Vitis vinifera HOM05D000177 ORTHO05D008165 2.7e-27 125.2 114 60.5
Hund18589 Selenicereus undatus HOM05D000177 ORTHO05D008165 5.1e-26 120.9 108 61.1
AUR62025673 Chenopodium quinoa HOM05D000177 ORTHO05D008165 6.7e-26 120.6 97 64.9
Atru.chr1.2644 Acer truncatum HOM05D000177 ORTHO05D008165 1.9e-25 119.0 117 58.1
EL10Ac7g18136 Beta vulgaris HOM05D000177 ORTHO05D008165 3.3e-25 118.2 113 58.4
TAR383G0996 Trochodendron aralioides HOM05D000177 ORTHO05D008165 3.3e-25 118.2 113 57.5
Lj9C543G8 Lonicera japonica HOM05D000177 ORTHO05D008165 5.6e-25 117.5 90 71.1
AUR62001331 Chenopodium quinoa HOM05D000177 ORTHO05D008165 7.4e-25 117.1 106 59.4
CSS0045845 Camellia sinensis var. sinensis HOM05D000177 ORTHO05D008165 1.3e-24 116.3 92 67.4
Cpa.g.sc176.4 Carica papaya HOM05D000177 ORTHO05D008165 1.6e-24 115.9 67 83.6
Eucgr.J03182 Eucalyptus grandis HOM05D000177 ORTHO05D008165 2.1e-24 115.5 101 62.4
Thecc.06G055900 Theobroma cacao HOM05D000177 ORTHO05D008165 2.1e-24 115.5 67 83.6
Duzib192G0617 Durio zibethinus HOM05D000177 ORTHO05D008165 2.8e-24 115.2 67 82.1
SalBow6G6517 Salvia bowleyana HOM05D000177 ORTHO05D008165 2.8e-24 115.2 118 55.1
Ciclev10031898m.g Citrus clementina HOM05D000177 ORTHO05D008165 3.7e-24 114.8 121 55.4
Gohir.A05G115000 Gossypium hirsutum HOM05D000177 ORTHO05D008165 3.7e-24 114.8 67 82.1
Cfa003436 Carpinus fangiana HOM05D000177 ORTHO05D008165 4.8e-24 114.4 107 60.7
COL.COLO4_31144 Corchorus olitorius HOM05D000177 ORTHO05D008165 6.2e-24 114.0 66 83.3
Duzib235G1337 Durio zibethinus HOM05D000177 ORTHO05D008165 6.2e-24 114.0 67 82.1
Nn8g41012 Nelumbo nucifera HOM05D000177 ORTHO05D008165 6.2e-24 114.0 120 54.2
Glyma.08G225000 Glycine max HOM05D000177 ORTHO05D008165 8.2e-24 113.6 108 60.2
ClCG09G001680 Citrullus lanatus HOM05D000177 ORTHO05D008165 1.1e-23 113.2 101 61.4
TWI75G0203 Tripterygium wilfordii HOM05D000177 ORTHO05D008165 1.1e-23 113.2 99 62.6
CiPaw.02G129000 Carya illinoinensis HOM05D000177 ORTHO05D008165 1.4e-23 112.8 112 58.0
Aqoxy7G02710 Aquilegia oxysepala HOM05D000177 ORTHO05D008165 2.4e-23 112.1 116 53.4
MD09G1166100 Malus domestica HOM05D000177 ORTHO05D008165 2.4e-23 112.1 103 61.2
Manes.14G008600 Manihot esculenta HOM05D000177 ORTHO05D008165 2.4e-23 112.1 64 82.8
QL05p088825 Quercus lobata HOM05D000177 ORTHO05D008165 2.4e-23 112.1 62 90.3
CANSAT01G2098 Cannabis sativa HOM05D000177 ORTHO05D008165 3.1e-23 111.7 114 57.9
CiPaw.01G208500 Carya illinoinensis HOM05D000177 ORTHO05D008165 3.1e-23 111.7 107 58.9
MELO3C024278.2 Cucumis melo HOM05D000177 ORTHO05D008165 3.1e-23 111.7 101 60.4
CsaV3_7G033640 Cucumis sativus L. HOM05D000177 ORTHO05D008165 3.1e-23 111.7 101 60.4
FvH4_6g36880 Fragaria vesca HOM05D000177 ORTHO05D008165 3.1e-23 111.7 66 81.8
FAN02G4609 Fragaria x ananassa HOM05D000177 ORTHO05D008165 3.1e-23 111.7 66 81.8
FAN05G5502 Fragaria x ananassa HOM05D000177 ORTHO05D008165 3.1e-23 111.7 66 81.8
FAN09G0997 Fragaria x ananassa HOM05D000177 ORTHO05D008165 3.1e-23 111.7 66 81.8
FAN14G4614 Fragaria x ananassa HOM05D000177 ORTHO05D008165 3.1e-23 111.7 66 81.8
Gohir.D05G115400 Gossypium hirsutum HOM05D000177 ORTHO05D008165 3.1e-23 111.7 67 79.1
Gorai.009G119500 Gossypium raimondii HOM05D000177 ORTHO05D008165 3.1e-23 111.7 67 79.1
RcHm_v2.0_Chr2g0149291 Rosa chinensis HOM05D000177 ORTHO05D008165 3.1e-23 111.7 66 81.8
Actinidia38812 Actinidia chinensis HOM05D000177 ORTHO05D008165 4.0e-23 111.3 115 53.0
ECA234G4553 Erigeron canadensis HOM05D000177 ORTHO05D008165 5.3e-23 110.9 67 80.6
Lalb_Chr04g0264831 Lupinus albus HOM05D000177 ORTHO05D008165 5.3e-23 110.9 63 84.1
Duzib160G0699 Durio zibethinus HOM05D000177 ORTHO05D008165 6.9e-23 110.5 63 84.1
arahy.Tifrunner.gnm1.ann1.G0Z8YB Arachis hypogaea HOM05D000177 ORTHO05D008165 9.0e-23 110.2 63 85.7
HanXRQChr14g0462851 Helianthus annuus HOM05D000177 ORTHO05D008165 1.2e-22 109.8 66 81.8
Lsat_1_v5_gn_5_137180 Lactuca sativa HOM05D000177 ORTHO05D008165 1.2e-22 109.8 66 81.8
Potri.008G004100 Populus trichocarpa HOM05D000177 ORTHO05D008165 1.2e-22 109.8 67 80.6
Prupe.3G023700 Prunus persica HOM05D000177 ORTHO05D008165 1.5e-22 109.4 108 57.4
QL07p015793 Quercus lobata HOM05D000263 ORTHO05D050639 1.5e-22 109.4 60 91.7
Hma1.2p1_0517F.1_g170850 Hydrangea macrophylla HOM05D000177 ORTHO05D008165 2.0e-22 109.0 107 58.9
TPR.G38703 Trifolium pratense HOM05D000177 ORTHO05D008165 2.0e-22 109.0 100 58.0
Medtr4g005330 Medicago truncatula HOM05D000177 ORTHO05D008165 2.6e-22 108.6 97 58.8
Sabra08G0001600 Salix brachista HOM05D000177 ORTHO05D008165 2.6e-22 108.6 120 53.3
SGA_v2.0_scaffold71G23979 Striga asiatica HOM05D000177 ORTHO05D008165 2.6e-22 108.6 64 81.2
DCAR_016080 Daucus carota HOM05D000177 ORTHO05D008165 3.4e-22 108.2 66 80.3
HanXRQChr12g0359731 Helianthus annuus HOM05D000177 ORTHO05D008165 3.4e-22 108.2 66 80.3
MBI13_g31553_MAGBIO Magnolia biondii HOM05D000177 ORTHO05D008165 3.4e-22 108.2 67 79.1
Nitab4.5_0005739g0050 Nicotiana tabacum HOM05D000177 ORTHO05D008165 4.5e-22 107.8 119 54.6
PSO063G6420 Papaver somniferum HOM05D000177 ORTHO05D008165 4.5e-22 107.8 62 83.9
PSO170G5256 Papaver somniferum HOM05D000177 ORTHO05D008165 4.5e-22 107.8 62 83.9
Sed0026418 Sechium edule HOM05D000177 ORTHO05D008165 4.5e-22 107.8 67 77.6
MD17G1161600 Malus domestica HOM05D000177 ORTHO05D008165 7.6e-22 107.1 66 80.3
PGSC0003DMG400009192 Solanum tuberosum HOM05D000177 ORTHO05D008165 7.6e-22 107.1 63 82.5
MSTRG.10872 Avicennia marina HOM05D000177 ORTHO05D008165 1.0e-21 106.7 64 78.1
Thhalv10021049m.g Eutrema salsugineum HOM05D000177 ORTHO05D008165 1.0e-21 106.7 67 76.1
Carub.0003s2017 Capsella rubella HOM05D000177 ORTHO05D008165 1.3e-21 106.3 67 74.6
Cc04_g00070 Coffea canephora HOM05D000177 ORTHO05D008165 1.3e-21 106.3 68 77.9
Phvul.010G164500 Phaseolus vulgaris HOM05D000177 ORTHO05D008165 1.3e-21 106.3 70 72.9
CAN.G790.10 Capsicum annuum HOM05D000177 ORTHO05D008165 1.7e-21 105.9 63 82.5
CARHR095850 Cardamine hirsuta HOM05D000177 ORTHO05D008165 1.7e-21 105.9 67 76.1
Migut.I01204 Erythranthe guttata HOM05D000177 ORTHO05D008165 1.7e-21 105.9 64 79.7
Sp3g18260 Schrenkiella parvula HOM05D000177 ORTHO05D008165 1.7e-21 105.9 67 74.6
BcaB06g26096 Brassica carinata HOM05D000177 ORTHO05D008165 2.2e-21 105.5 67 74.6
A05p28740 Brassica napus HOM05D000177 ORTHO05D008165 2.2e-21 105.5 67 74.6
C05p44150 Brassica napus HOM05D000177 ORTHO05D008165 2.2e-21 105.5 67 74.6
BolC5t33137H Brassica oleracea HOM05D000177 ORTHO05D008165 2.2e-21 105.5 67 74.6
BraA05t21751Z Brassica rapa HOM05D000177 ORTHO05D008165 2.2e-21 105.5 67 74.6
unitig_748.g8064 Utricularia gibba HOM05D000177 ORTHO05D008165 2.2e-21 105.5 88 64.8
vmacro18739 Vaccinium macrocarpon HOM05D000177 ORTHO05D008165 2.2e-21 105.5 140 48.6
VMungo0331G1678 Vigna mungo HOM05D000177 ORTHO05D008165 2.2e-21 105.5 70 72.9
ATR0626G405 Amborella trichopoda HOM05D000177 ORTHO05D008165 2.9e-21 105.1 62 80.6
AL3G33940 Arabidopsis lyrata HOM05D000177 ORTHO05D008165 2.9e-21 105.1 67 73.1
AT3G20240 Arabidopsis thaliana HOM05D000177 ORTHO05D008165 2.9e-21 105.1 67 73.1
CDE05G0266 Ceratophyllum demersum HOM05D000177 ORTHO05D008165 2.9e-21 105.1 65 75.4
HanXRQChr10g0311231 Helianthus annuus HOM05D000177 ORTHO05D008165 2.9e-21 105.1 60 85.0
Solyc03g123990.3 Solanum lycopersicum HOM05D000177 ORTHO05D008165 3.8e-21 104.8 63 79.4
Sopen03g041730 Solanum pennellii HOM05D000177 ORTHO05D008165 3.8e-21 104.8 63 79.4
Lj3g0002816 Lotus japonicus HOM05D000177 ORTHO05D008165 4.9e-21 104.4 63 77.8
A03p41640 Brassica napus HOM05D000177 ORTHO05D008165 8.4e-21 103.6 67 71.6
BolC3t17383H Brassica oleracea HOM05D000177 ORTHO05D008165 8.4e-21 103.6 67 71.6
BraA03t13316Z Brassica rapa HOM05D000177 ORTHO05D008165 8.4e-21 103.6 67 71.6
Glyma.07G001800 Glycine max HOM05D000177 ORTHO05D008165 8.4e-21 103.6 64 76.6
Peaxi162Scf00038g02650 Petunia axillaris HOM05D000177 ORTHO05D008165 1.1e-20 103.2 63 77.8
THA.LOC104817843 Tarenaya hassleriana HOM05D000177 ORTHO05D008165 1.1e-20 103.2 67 76.1
BcaB04g19096 Brassica carinata HOM05D000177 ORTHO05D008165 1.4e-20 102.8 67 71.6
CDE05G0768 Ceratophyllum demersum HOM05D000177 ORTHO05D008165 1.4e-20 102.8 61 78.7
Os08g0520000 Oryza sativa ssp. japonica HOM05D000177 ORTHO05D008165 1.4e-20 102.8 63 77.8
C03p50990 Brassica napus HOM05D000177 ORTHO05D008165 2.5e-20 102.1 67 70.1
Aa31LG8G7050 Aethionema arabicum HOM05D000177 ORTHO05D008165 3.2e-20 101.7 67 73.1
Nitab4.5_0005664g0020 Nicotiana tabacum HOM05D000177 ORTHO05D008165 3.2e-20 101.7 65 80.0
HPP92_015358 Vanilla planifolia HOM05D000177 ORTHO05D008165 4.2e-20 101.3 62 74.2
SHI31122 Sapria himalayana HOM05D000177 ORTHO05D008165 9.3e-20 100.1 64 75.0
Os09g0497000 Oryza sativa ssp. japonica HOM05D000177 ORTHO05D008165 1.6e-19 99.4 78 66.7
Zm00001eb035680 Zea mays HOM05D000177 ORTHO05D008165 1.6e-19 99.4 62 77.4
BcaC01g03572 Brassica carinata HOM05D000177 ORTHO05D008165 6.7e-18 94.0 60 73.3
Haze_16189 Corylus avellana HOM05D000177 ORTHO05D008165 8.7e-18 93.6 162 43.2
Zm00001eb317160 Zea mays HOM05D000177 ORTHO05D008165 2.5e-17 92.0 61 72.1
PGR031G2363 Punica granatum HOM05D000177 ORTHO05D008165 5.7e-17 90.9 53 86.8
Rhsim08G0250800 Rhododendron simsii HOM05D000177 ORTHO05D008165 7.4e-17 90.5 115 49.6
Psat7g265120 Pisum sativum HOM05D000177 ORTHO05D008165 9.7e-17 90.1 52 80.8
Zm00001eb329860 Zea mays HOM05D000177 ORTHO05D008165 2.4e-15 85.5 61 63.9
arahy.Tifrunner.gnm1.ann1.5A6DFA Arachis hypogaea HOM05D000177 ORTHO05D008165 3.4e-14 81.6 45 88.9
Actinidia21891 Actinidia chinensis HOM05D000177 ORTHO05D008165 3.8e-13 78.2 44 81.8
Potri.010G253600 Populus trichocarpa HOM05D000177 ORTHO05D008165 4.2e-12 74.7 95 51.6
Oeu038103.2 Olea europaea HOM05D000177 ORTHO05D008165 1.2e-11 73.2 44 72.7
Pp3c15_14990 Physcomitrium patens HOM05D000177 ORTHO05D008165 4.6e-11 71.2 61 54.1
Sc12g0011210 Simmondsia chinensis HOM05D000177 ORTHO05D008165 1.4e-10 69.7 33 97.0
arahy.Tifrunner.gnm1.ann1.HS167G Arachis hypogaea HOM05D000177 ORTHO05D085064 8.8e-10 67.0 44 75.0
AagrBONN_evm.TU.Sc2ySwM_228.93 Anthoceros agrestis HOM05D000177 ORTHO05D008165 1.5e-09 66.2 60 48.3
Dinv20331 Davidia involucrata HOM05D000177 ORTHO05D008165 5.9e-06 54.3 29 86.2
Lj7A630T42 Lonicera japonica HOM05D000177 ORTHO05D003047 5.9e-06 54.3 87 36.8
CBR_g44453 Chara braunii HOM05D000177 ORTHO05D003047 7.7e-06 53.9 54 46.3
Oeu036563.1 Olea europaea HOM05D000177 ORTHO05D003047 7.7e-06 53.9 87 35.6
SMO145G0166 Selaginella moellendorffii HOM05D000177 ORTHO05D003047 7.7e-06 53.9 61 37.7


User provided reference genes

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