Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0005440 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-76 289.7 139 100.0
Sc13g0007430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.0e-39 164.5 130 63.1
Sc07g0004510 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.0e-38 163.7 137 65.7
Sc02g0004970 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.8e-35 151.0 128 60.9
Sc11g0004150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-33 146.7 106 69.8
Sc14g0002490 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.9e-33 145.6 111 64.0
Sc17g0003520 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.7e-33 145.2 112 62.5
Sc15g0002320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-31 140.2 92 75.0
Sc05g0005690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-31 139.4 104 69.2
Sc05g0005050 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.5e-31 138.7 103 65.0
Sc24g0001190 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.5e-31 138.7 121 58.7
Sc12g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-29 133.3 129 56.6
Sc22g0004320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.6e-29 131.3 104 64.4
Sc24g0001130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.5e-29 130.6 104 68.3
Sc03g0004300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-28 130.2 103 65.0
Sc01g0005460 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.6e-26 122.5 100 64.0
Sc01g0006550 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.9e-26 120.6 124 55.6
Sc06g0004250 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.9e-26 120.6 102 59.8
Sc17g0003130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-25 120.2 102 58.8
Sc05g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.1e-24 115.2 106 58.5
Sc02g0004980 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.2e-24 114.0 90 64.4
Sc24g0001220 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.6e-23 111.7 97 62.9
Sc17g0003150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.0e-23 111.3 154 46.1
Sc05g0004430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-22 110.2 91 63.7
Sc13g0008210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.3e-22 109.4 86 65.1
Sc18g0005300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-21 106.7 94 59.6
Sc22g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.2e-20 101.3 75 64.0
Sc23g0003790 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.2e-20 101.3 104 53.8
Sc08g0004760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-19 100.5 66 68.2
Sc14g0004880 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-19 100.5 74 68.9
Sc21g0003860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-19 100.1 103 53.4
Sc02g0004890 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.4e-19 99.4 74 67.6
Sc04g0004840 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.1e-19 99.0 73 69.9
Sc02g0005760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.8e-19 97.8 73 65.8
Sc03g0005210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.8e-19 97.8 100 52.0
Sc02g0004160 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.4e-18 95.1 71 66.2
Sc02g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.8e-18 94.7 64 73.4
Sc10g0007130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.6e-18 94.4 102 50.0
Sc20g0002780 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.9e-18 94.0 74 64.9
Sc22g0004420 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.7e-17 93.2 74 63.5
Sc01g0006390 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.8e-17 92.0 84 54.8
Sc17g0002860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.4e-16 88.2 73 58.9
Sc07g0005080 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.0e-15 84.7 69 63.8
Sc26g0003020 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.0e-15 84.7 73 60.3
Sc02g0004810 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.8e-15 84.3 69 60.9
Sc08g0005480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.6e-14 81.3 53 69.8
Sc10g0007340 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-13 80.5 64 60.9
Sc01g0006690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-13 80.1 67 59.7
Sc17g0003650 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-12 76.6 73 53.4
Sc05g0004680 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.8e-12 75.1 93 44.1
Sc02g0005270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.1e-12 74.3 76 51.3
Sabra13G0012400 Salix brachista HOM05D020966 ORTHO05D010251 1.4e-11 73.6 91 42.9
Sc12g0008150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.1e-11 72.4 55 65.5
EL10Ac2g03892 Beta vulgaris HOM05D020966 ORTHO05D023391 1.3e-09 67.0 103 38.8
AUR62009156 Chenopodium quinoa HOM05D020966 ORTHO05D023391 1.3e-09 67.0 103 40.8
RcHm_v2.0_Chr2g0121071 Rosa chinensis HOM05D008702 ORTHO05D003639 1.7e-09 66.6 79 44.3
RcHm_v2.0_Chr2g0116581 Rosa chinensis HOM05D008702 ORTHO05D003639 2.9e-09 65.9 79 44.3
RcHm_v2.0_Chr2g0142701 Rosa chinensis HOM05D008702 ORTHO05D003639 2.9e-09 65.9 79 44.3
RcHm_v2.0_Chr6g0249161 Rosa chinensis HOM05D008702 ORTHO05D003639 2.9e-09 65.9 79 44.3
AUR62022070 Chenopodium quinoa HOM05D020966 ORTHO05D023391 3.8e-09 65.5 103 39.8
RcHm_v2.0_Chr2g0138191 Rosa chinensis HOM05D008702 ORTHO05D003639 3.8e-09 65.5 79 44.3
RcHm_v2.0_Chr2g0152981 Rosa chinensis HOM05D008702 ORTHO05D003639 8.4e-09 64.3 70 47.1
Sc05g0004290 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.9e-08 63.2 68 48.5
RcHm_v2.0_Chr5g0004321 Rosa chinensis HOM05D008702 ORTHO05D003639 7.1e-08 61.2 79 39.2
Ah.11g044760 Amaranthus hybridus HOM05D020966 ORTHO05D023391 9.3e-08 60.8 97 38.1
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.2e-07 60.5 95 35.8
Nitab4.5_0006587g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 2.1e-07 59.7 95 34.7
Sc11g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-07 59.7 46 60.9
Peaxi162Scf00820g00117 Petunia axillaris HOM05D008778 ORTHO05D003639 3.0e-06 55.8 94 33.0
AT4G16050 Arabidopsis thaliana HOM05D001371 ORTHO05D001319 3.9e-06 55.5 129 30.2
Sp7g14520 Schrenkiella parvula HOM05D001371 ORTHO05D001319 3.9e-06 55.5 106 30.2
Nn1g03577 Nelumbo nucifera HOM05D001371 ORTHO05D001319 5.1e-06 55.1 93 33.3
QL01p013702 Quercus lobata HOM05D009149 ORTHO05D003639 6.6e-06 54.7 128 28.1


User provided reference genes

Program Settings