Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0003220 Simmondsia chinensis HOM05D000003 ORTHO05D000007 1.2e-70 269.6 132 100.0
Sc12g0007530 Simmondsia chinensis HOM05D000003 ORTHO05D000007 3.3e-15 85.5 96 44.8
vmacro18598 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 1.0e-11 73.9 106 34.9
CSS0007463 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.5e-11 70.9 107 35.5
vmacro06198 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 2.5e-10 69.3 92 31.5
vmacro06921 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 3.2e-10 68.9 93 36.6
CSS0015987 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.4e-10 67.4 107 33.6
Sc09g0007090 Simmondsia chinensis HOM05D020479 ORTHO05D000007 9.4e-10 67.4 91 33.0
Dinv05257 Davidia involucrata HOM05D000003 ORTHO05D000007 1.6e-09 66.6 93 34.4
Dinv07777 Davidia involucrata HOM05D000003 ORTHO05D000007 1.6e-09 66.6 93 34.4
CSS0028642 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-09 66.2 92 33.7
Dinv00381 Davidia involucrata HOM05D000003 ORTHO05D000007 2.1e-09 66.2 92 34.8
Dinv15042 Davidia involucrata HOM05D000003 ORTHO05D000007 2.1e-09 66.2 92 34.8
vmacro02446 Vaccinium macrocarpon HOM05D000880 ORTHO05D007053 3.6e-09 65.5 89 38.2
Rhsim08G0120800 Rhododendron simsii HOM05D012787 ORTHO05D000007 6.1e-09 64.7 93 33.3
Dinv40971 Davidia involucrata HOM05D000003 ORTHO05D000007 8.0e-09 64.3 89 34.8
PSO063G5792 Papaver somniferum HOM05D000003 ORTHO05D000007 8.0e-09 64.3 102 31.4
PSO384G1593 Papaver somniferum HOM05D000003 ORTHO05D000006 8.0e-09 64.3 100 32.0
PGR031G1452 Punica granatum HOM05D000848 ORTHO05D000007 8.0e-09 64.3 94 33.0
Rhsim02G0109600 Rhododendron simsii HOM05D000003 ORTHO05D000007 8.0e-09 64.3 93 32.3
Sc04g0004080 Simmondsia chinensis HOM05D027308 ORTHO05D021005 8.0e-09 64.3 91 37.4
Dinv13615 Davidia involucrata HOM05D000003 ORTHO05D000007 1.0e-08 63.9 92 32.6
Dinv17303 Davidia involucrata HOM05D000003 ORTHO05D000007 1.0e-08 63.9 92 33.7
vmacro10906 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 1.0e-08 63.9 91 31.9
SHI08422 Sapria himalayana HOM05D000003 ORTHO05D000007 1.4e-08 63.5 97 37.1
Dinv05828 Davidia involucrata HOM05D000003 ORTHO05D000007 1.8e-08 63.2 94 35.1
Sc13g0007250 Simmondsia chinensis HOM05D027308 ORTHO05D021005 1.8e-08 63.2 79 34.2
Dinv10242 Davidia involucrata HOM05D000003 ORTHO05D000007 2.3e-08 62.8 92 33.7
Dinv12308 Davidia involucrata HOM05D000003 ORTHO05D000007 2.3e-08 62.8 92 31.5
Dinv21508 Davidia involucrata HOM05D000003 ORTHO05D000007 2.3e-08 62.8 92 32.6
Dinv01641 Davidia involucrata HOM05D000003 ORTHO05D000007 3.0e-08 62.4 92 33.7
PSO500G0234 Papaver somniferum HOM05D000003 ORTHO05D000007 4.0e-08 62.0 90 27.8
PGR119G1421 Punica granatum HOM05D000003 ORTHO05D000007 4.0e-08 62.0 93 32.3
Rhsim11G0011200 Rhododendron simsii HOM05D000003 ORTHO05D000007 4.0e-08 62.0 93 33.3
vmacro08911 Vaccinium macrocarpon HOM05D000003 ORTHO05D000006 4.0e-08 62.0 91 31.9
Dinv02876 Davidia involucrata HOM05D000003 ORTHO05D000007 5.2e-08 61.6 92 31.5
PGR119G0087 Punica granatum HOM05D000003 ORTHO05D000007 5.2e-08 61.6 94 30.9
Rhsim11G0147600 Rhododendron simsii HOM05D000003 ORTHO05D000007 5.2e-08 61.6 92 35.9
Dinv00142 Davidia involucrata HOM05D000003 ORTHO05D000007 6.7e-08 61.2 86 33.7
Dinv01133 Davidia involucrata HOM05D000003 ORTHO05D000007 6.7e-08 61.2 92 31.5
Rhsim04G0043700 Rhododendron simsii HOM05D000003 ORTHO05D000007 6.7e-08 61.2 93 35.5
Aqoxy1G02413 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 8.8e-08 60.8 92 30.4
Aqoxy3G01613 Aquilegia oxysepala HOM05D003167 ORTHO05D000007 8.8e-08 60.8 91 30.8
Dinv01975 Davidia involucrata HOM05D000003 ORTHO05D000007 8.8e-08 60.8 92 32.6
Dinv12306 Davidia involucrata HOM05D000003 ORTHO05D000007 8.8e-08 60.8 92 32.6
Dinv25826 Davidia involucrata HOM05D000003 ORTHO05D000007 8.8e-08 60.8 92 33.7
Sabra04G0111000 Salix brachista HOM05D000003 ORTHO05D000007 8.8e-08 60.8 93 36.6
Dinv18089 Davidia involucrata HOM05D000003 ORTHO05D000007 1.2e-07 60.5 53 45.3
PSO111G0079 Papaver somniferum HOM05D000003 ORTHO05D000007 1.2e-07 60.5 91 34.1
PGR083G1806 Punica granatum HOM05D000003 ORTHO05D000007 1.2e-07 60.5 94 31.9
PGR102G0045 Punica granatum HOM05D000848 ORTHO05D000007 1.2e-07 60.5 94 31.9
Rhsim13G0137500 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.2e-07 60.5 92 33.7
Sabra03G0042200 Salix brachista HOM05D000003 ORTHO05D000007 1.2e-07 60.5 106 32.1
Aqoxy4G01937 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 1.5e-07 60.1 92 31.5
Rhsim11G0034800 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.5e-07 60.1 92 32.6
Rhsim01G0009400 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.0e-07 59.7 68 42.6
Rhsim01G0069100 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.0e-07 59.7 93 32.3
Rhsim02G0001200 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.0e-07 59.7 93 34.4
Rhsim04G0152900 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.0e-07 59.7 92 34.8
Sabra04G0155000 Salix brachista HOM05D000003 ORTHO05D000007 2.0e-07 59.7 93 34.4
Sabra10G0196700 Salix brachista HOM05D000003 ORTHO05D000007 2.0e-07 59.7 93 33.3
Sabra19G0064100 Salix brachista HOM05D000003 ORTHO05D000007 2.0e-07 59.7 101 32.7
Dinv20583 Davidia involucrata HOM05D000003 ORTHO05D000007 2.6e-07 59.3 102 30.4
Dinv22485 Davidia involucrata HOM05D000003 ORTHO05D000007 2.6e-07 59.3 92 30.4
Duzib093G1447 Durio zibethinus HOM05D000003 ORTHO05D000007 2.6e-07 59.3 57 47.4
Rhsim04G0088500 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.6e-07 59.3 95 30.5
Rhsim11G0155800 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.6e-07 59.3 93 35.5
Aqoxy4G01583 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 3.3e-07 58.9 97 30.9
Aqoxy5G02531 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 3.3e-07 58.9 92 31.5
Aqoxy6G01288 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 3.3e-07 58.9 97 33.0
Oeu021298.1 Olea europaea HOM05D000003 ORTHO05D000007 3.3e-07 58.9 92 35.9
PSO782G5432 Papaver somniferum HOM05D000003 ORTHO05D000007 3.3e-07 58.9 90 33.3
PGR044G0790 Punica granatum HOM05D000840 ORTHO05D000007 3.3e-07 58.9 93 34.4
Rhsim01G0276400 Rhododendron simsii HOM05D000003 ORTHO05D000007 3.3e-07 58.9 92 28.3
Rhsim04G0217700 Rhododendron simsii HOM05D012787 ORTHO05D033914 3.3e-07 58.9 92 33.7
Sabra10G0087000 Salix brachista HOM05D000003 ORTHO05D000007 3.3e-07 58.9 102 32.4
Sabra13G0081800 Salix brachista HOM05D000003 ORTHO05D000007 3.3e-07 58.9 99 32.3
Sabra15G0067700 Salix brachista HOM05D000003 ORTHO05D000007 3.3e-07 58.9 93 34.4
Sabra18G0055200 Salix brachista HOM05D000003 ORTHO05D000007 3.3e-07 58.9 99 32.3
SHI29733 Sapria himalayana HOM05D000003 ORTHO05D000007 3.3e-07 58.9 103 33.0
CSS0025791 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.4e-07 58.5 107 33.6
PGR042G3790 Punica granatum HOM05D000003 ORTHO05D000007 4.4e-07 58.5 95 33.7
Rhsim11G0143400 Rhododendron simsii HOM05D000003 ORTHO05D000007 4.4e-07 58.5 93 29.0
Rhsim12G0084200 Rhododendron simsii HOM05D000089 ORTHO05D000007 4.4e-07 58.5 95 35.8
Sabra07G0075700 Salix brachista HOM05D000003 ORTHO05D000007 4.4e-07 58.5 94 34.0
Atru.chr5.2029 Acer truncatum HOM05D000988 ORTHO05D000007 5.7e-07 58.2 99 29.3
Dinv17712 Davidia involucrata HOM05D000003 ORTHO05D000007 5.7e-07 58.2 82 32.9
Oeu018906.1 Olea europaea HOM05D000003 ORTHO05D000007 5.7e-07 58.2 92 32.6
PSO782G5707 Papaver somniferum HOM05D000003 ORTHO05D000007 5.7e-07 58.2 91 28.6
PGR044G1453 Punica granatum HOM05D000840 ORTHO05D000007 5.7e-07 58.2 93 34.4
SHI49152 Sapria himalayana HOM05D000003 ORTHO05D000007 5.7e-07 58.2 93 35.5
Aqoxy1G01841 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 7.5e-07 57.8 92 31.5
Aqoxy1G02043 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 7.5e-07 57.8 92 37.0
Aqoxy4G01395 Aquilegia oxysepala HOM05D000101 ORTHO05D000089 7.5e-07 57.8 92 37.0
ECA236G4937 Erigeron canadensis HOM05D000003 ORTHO05D000007 7.5e-07 57.8 103 35.9
PGR102G0991 Punica granatum HOM05D000003 ORTHO05D000004 7.5e-07 57.8 93 29.0
Rhsim01G0214400 Rhododendron simsii HOM05D004804 ORTHO05D000007 7.5e-07 57.8 54 44.4
Sabra19G0078700 Salix brachista HOM05D000003 ORTHO05D000007 7.5e-07 57.8 93 32.3
SHI27069 Sapria himalayana HOM05D000003 ORTHO05D000004 7.5e-07 57.8 93 31.2
Atru.chr5.2070 Acer truncatum HOM05D000003 ORTHO05D000007 9.7e-07 57.4 99 31.3
Dinv00809 Davidia involucrata HOM05D000003 ORTHO05D000007 9.7e-07 57.4 91 33.0
Dinv04900 Davidia involucrata HOM05D000003 ORTHO05D000007 9.7e-07 57.4 93 34.4
Dinv12387 Davidia involucrata HOM05D000003 ORTHO05D000007 9.7e-07 57.4 92 30.4
Dinv37987 Davidia involucrata HOM05D000633 ORTHO05D000477 9.7e-07 57.4 99 30.3
Dinv41003 Davidia involucrata HOM05D000003 ORTHO05D000007 9.7e-07 57.4 82 32.9
Oeu019215.1 Olea europaea HOM05D000003 ORTHO05D000007 9.7e-07 57.4 92 37.0
PSO063G4674 Papaver somniferum HOM05D000003 ORTHO05D000006 9.7e-07 57.4 91 34.1
Rhsim04G0149900 Rhododendron simsii HOM05D000003 ORTHO05D000007 9.7e-07 57.4 92 34.8
Rhsim08G0149600 Rhododendron simsii HOM05D000003 ORTHO05D000007 9.7e-07 57.4 92 33.7
Sabra07G0044400 Salix brachista HOM05D000003 ORTHO05D000007 9.7e-07 57.4 97 33.0
vmacro17797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 9.7e-07 57.4 68 39.7
Aqoxy2G01975 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 1.3e-06 57.0 96 32.3
Dinv25855 Davidia involucrata HOM05D000003 ORTHO05D000007 1.3e-06 57.0 93 30.1
Dinv29931 Davidia involucrata HOM05D000003 ORTHO05D000007 1.3e-06 57.0 53 45.3
Rhsim01G0145600 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.3e-06 57.0 94 30.9
Rhsim10G0146400 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.3e-06 57.0 73 32.9
SHI02298 Sapria himalayana HOM05D003640 ORTHO05D004439 1.3e-06 57.0 92 39.1
vmacro20102 Vaccinium macrocarpon HOM05D002317 ORTHO05D002420 1.3e-06 57.0 81 30.9
Atru.chr5.1994 Acer truncatum HOM05D000003 ORTHO05D000007 1.7e-06 56.6 99 29.3
Dinv06088 Davidia involucrata HOM05D000003 ORTHO05D000007 1.7e-06 56.6 82 32.9
Dinv18722 Davidia involucrata HOM05D000003 ORTHO05D000007 1.7e-06 56.6 93 31.2
Dinv21537 Davidia involucrata HOM05D000003 ORTHO05D000006 1.7e-06 56.6 93 33.3
Dinv39770 Davidia involucrata HOM05D000003 ORTHO05D000007 1.7e-06 56.6 89 31.5
PSO384G2452 Papaver somniferum HOM05D000003 ORTHO05D000007 1.7e-06 56.6 83 28.9
Rhsim02G0142500 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.7e-06 56.6 93 35.5
Atru.chr3.2011 Acer truncatum HOM05D000003 ORTHO05D000007 2.2e-06 56.2 99 30.3
Dinv06322 Davidia involucrata HOM05D000003 ORTHO05D000007 2.2e-06 56.2 93 31.2
Rhsim05G0103400 Rhododendron simsii HOM05D002233 ORTHO05D000007 2.2e-06 56.2 55 47.3
Rhsim06G0120300 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.2e-06 56.2 55 47.3
RhsimUnG0127000 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.2e-06 56.2 54 44.4
Sabra16G0321900 Salix brachista HOM05D000003 ORTHO05D000007 2.2e-06 56.2 94 33.0
SHI27544 Sapria himalayana HOM05D000003 ORTHO05D000007 2.2e-06 56.2 93 35.5
COL.COLO4_19801 Corchorus olitorius HOM05D000848 ORTHO05D000007 2.8e-06 55.8 108 35.2
Dinv04798 Davidia involucrata HOM05D000132 ORTHO05D000058 2.8e-06 55.8 92 31.5
Oeu003867.1 Olea europaea HOM05D000003 ORTHO05D000007 2.8e-06 55.8 85 32.9
Oeu008176.1 Olea europaea HOM05D000003 ORTHO05D000007 2.8e-06 55.8 96 31.2
Oeu024314.1 Olea europaea HOM05D000003 ORTHO05D000007 2.8e-06 55.8 92 37.0
PSO170G1972 Papaver somniferum HOM05D000003 ORTHO05D000007 2.8e-06 55.8 98 35.7
Rhsim12G0177600 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.8e-06 55.8 94 31.9
SHI34677 Sapria himalayana HOM05D000003 ORTHO05D000004 2.8e-06 55.8 96 35.4
Dinv20159 Davidia involucrata HOM05D000041 ORTHO05D000007 3.7e-06 55.5 92 32.6
Lj3A1025T53 Lonicera japonica HOM05D000003 ORTHO05D000007 3.7e-06 55.5 110 30.9
Rhsim03G0101000 Rhododendron simsii HOM05D000003 ORTHO05D000007 3.7e-06 55.5 94 34.0
Sabra11G0113300 Salix brachista HOM05D000003 ORTHO05D000007 3.7e-06 55.5 93 32.3
Sopen12g011790 Solanum pennellii HOM05D000003 ORTHO05D000004 3.7e-06 55.5 94 33.0
Aqoxy2G02072 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 4.8e-06 55.1 96 30.2
CSS0008466 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.8e-06 55.1 107 32.7
CSS0041095 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.8e-06 55.1 107 32.7
DCAR_022683 Daucus carota HOM05D019079 ORTHO05D000007 4.8e-06 55.1 98 35.7
Dinv44147 Davidia involucrata HOM05D000003 ORTHO05D000007 4.8e-06 55.1 53 45.3
Rhsim04G0153000 Rhododendron simsii HOM05D000003 ORTHO05D000007 4.8e-06 55.1 54 38.9
Rhsim11G0120400 Rhododendron simsii HOM05D000003 ORTHO05D000007 4.8e-06 55.1 93 31.2
SHI05532 Sapria himalayana HOM05D000003 ORTHO05D000004 4.8e-06 55.1 93 34.4
SHI07294 Sapria himalayana HOM05D000003 ORTHO05D000004 4.8e-06 55.1 93 34.4
SHI09646 Sapria himalayana HOM05D000003 ORTHO05D000007 4.8e-06 55.1 103 31.1
Sopen04g018180 Solanum pennellii HOM05D000003 ORTHO05D000007 4.8e-06 55.1 97 32.0
Sopen10g008120 Solanum pennellii HOM05D000003 ORTHO05D000004 4.8e-06 55.1 97 32.0
Aqoxy5G03035 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 6.3e-06 54.7 95 29.5
Aqoxy6G02383 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 6.3e-06 54.7 56 41.1
CSS0004861 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.3e-06 54.7 107 32.7
Dinv34972 Davidia involucrata HOM05D000003 ORTHO05D000007 6.3e-06 54.7 92 31.5
Dinv39595 Davidia involucrata HOM05D000003 ORTHO05D000007 6.3e-06 54.7 93 30.1
Oeu018617.1 Olea europaea HOM05D000003 ORTHO05D000007 6.3e-06 54.7 53 49.1
Oeu023306.1 Olea europaea HOM05D000003 ORTHO05D000007 6.3e-06 54.7 53 47.2
Peaxi162Scf01102g00016 Petunia axillaris HOM05D000003 ORTHO05D000007 6.3e-06 54.7 97 29.9
Dinv05825 Davidia involucrata HOM05D000003 ORTHO05D000007 8.2e-06 54.3 93 29.0
Dinv07047 Davidia involucrata HOM05D000003 ORTHO05D000007 8.2e-06 54.3 64 40.6
Potri.017G002400 Populus trichocarpa HOM05D000003 ORTHO05D000007 8.2e-06 54.3 52 48.1
Rhsim04G0249700 Rhododendron simsii HOM05D000003 ORTHO05D000007 8.2e-06 54.3 105 29.5
RhsimUnG0127600 Rhododendron simsii HOM05D000003 ORTHO05D000007 8.2e-06 54.3 92 30.4
SHI20940 Sapria himalayana HOM05D000003 ORTHO05D000004 8.2e-06 54.3 93 34.4
Sopen00g009320 Solanum pennellii HOM05D000003 ORTHO05D000007 8.2e-06 54.3 103 34.0
Sopen00g010420 Solanum pennellii HOM05D000003 ORTHO05D000007 8.2e-06 54.3 100 30.0


User provided reference genes

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