Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0003200 Simmondsia chinensis HOM05D000203 ORTHO05D388392 2.1e-103 379.0 188 100.0
Sc18g0006760 Simmondsia chinensis HOM05D000203 ORTHO05D000135 3.0e-25 119.4 155 41.9
Sc06g0003170 Simmondsia chinensis HOM05D000203 ORTHO05D000135 9.6e-16 87.8 47 93.6
arahy.Tifrunner.gnm1.ann1.CPT3GD Arachis hypogaea HOM05D000203 ORTHO05D000135 2.5e-08 63.2 145 27.6
Prupe.8G151900 Prunus persica HOM05D000203 ORTHO05D000135 5.6e-08 62.0 111 34.2
arahy.Tifrunner.gnm1.ann1.BPE0YX Arachis hypogaea HOM05D000203 ORTHO05D000135 7.4e-08 61.6 145 26.9
Lalb_Chr21g0307931 Lupinus albus HOM05D000203 ORTHO05D000135 7.4e-08 61.6 123 28.5
Sed0009196 Sechium edule HOM05D000203 ORTHO05D000135 1.3e-07 60.8 91 34.1
TPR.G3865 Trifolium pratense HOM05D000203 ORTHO05D000135 1.3e-07 60.8 135 28.9
Psat5g214600 Pisum sativum HOM05D000203 ORTHO05D000135 2.1e-07 60.1 97 29.9
Medtr3g080940 Medicago truncatula HOM05D000203 ORTHO05D000135 4.8e-07 58.9 98 30.6
MELO3C018030.2 Cucumis melo HOM05D000203 ORTHO05D000135 6.2e-07 58.5 86 34.9
CsaV3_4G000010 Cucumis sativus L. HOM05D000203 ORTHO05D000135 6.2e-07 58.5 86 34.9
TWI75G1001 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 8.1e-07 58.2 83 34.9
Psat6g211280 Pisum sativum HOM05D000203 ORTHO05D000135 1.1e-06 57.8 86 32.6
Actinidia02433 Actinidia chinensis HOM05D000203 ORTHO05D000135 1.4e-06 57.4 212 27.4
TPR.G3858 Trifolium pratense HOM05D000203 ORTHO05D000135 1.4e-06 57.4 128 28.1
Ca_16299_v3 Cicer arietinum L. HOM05D000203 ORTHO05D000135 1.8e-06 57.0 127 26.0
Psat5g108920 Pisum sativum HOM05D000203 ORTHO05D000135 1.8e-06 57.0 98 29.6
TWI36G0397 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 1.8e-06 57.0 83 33.7
FvH4_2g03030 Fragaria vesca HOM05D000203 ORTHO05D000135 2.4e-06 56.6 86 34.9
FAN24G1168 Fragaria x ananassa HOM05D000203 ORTHO05D000135 2.4e-06 56.6 86 34.9
Ca_11009_v3 Cicer arietinum L. HOM05D000203 ORTHO05D000135 3.1e-06 56.2 86 33.7
ClCG10G009960 Citrullus lanatus HOM05D000203 ORTHO05D000135 3.1e-06 56.2 86 33.7
Medtr8g043650 Medicago truncatula HOM05D000203 ORTHO05D000135 3.1e-06 56.2 86 34.9
EL10Ac9g21519 Beta vulgaris HOM05D000203 ORTHO05D000135 4.0e-06 55.8 87 33.3
Cpa.g.sc625.4 Carica papaya HOM05D000203 ORTHO05D000135 4.0e-06 55.8 83 30.1
FAN27G2405 Fragaria x ananassa HOM05D000203 ORTHO05D000135 4.0e-06 55.8 120 30.0
Potri.017G047300 Populus trichocarpa HOM05D000203 ORTHO05D000135 4.0e-06 55.8 83 31.3
RcHm_v2.0_Chr6g0247821 Rosa chinensis HOM05D000203 ORTHO05D000135 4.0e-06 55.8 104 32.7
Ca_17913_v3 Cicer arietinum L. HOM05D000203 ORTHO05D000135 5.3e-06 55.5 123 27.6
CSS0049268 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 6.9e-06 55.1 101 32.7
Medtr1g105920 Medicago truncatula HOM05D000203 ORTHO05D000135 9.0e-06 54.7 158 28.5


User provided reference genes

Program Settings