Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow8G3102 Salvia bowleyana HOM05D000947 ORTHO05D000079 9.5e-86 320.1 156 100.0
SalBow8G4529 Salvia bowleyana HOM05D000947 ORTHO05D000079 1.4e-23 113.6 54 98.1
MSTRG.10130 Avicennia marina HOM05D000947 ORTHO05D000079 5.1e-23 111.7 89 64.0
Migut.G00106 Erythranthe guttata HOM05D000947 ORTHO05D000079 1.5e-22 110.2 54 94.4
SGA_v2.0_scaffold444G51713 Striga asiatica HOM05D000947 ORTHO05D000079 3.3e-22 109.0 92 60.9
MSTRG.3873 Avicennia marina HOM05D000947 ORTHO05D000079 8.2e-21 104.4 93 62.4
SGA_v2.0_scaffold18G08377 Striga asiatica HOM05D000947 ORTHO05D000079 2.1e-16 89.7 49 85.7
Dinv44322 Davidia involucrata HOM05D000947 ORTHO05D000079 1.8e-15 86.7 54 79.6
CSS0047505 Camellia sinensis var. sinensis HOM05D000947 ORTHO05D000079 8.8e-15 84.3 79 58.2
Lj3A827T61 Lonicera japonica HOM05D000947 ORTHO05D000079 1.1e-14 84.0 79 60.8
Dinv02069 Davidia involucrata HOM05D000947 ORTHO05D000079 1.5e-14 83.6 54 74.1
Rhsim02G0006100 Rhododendron simsii HOM05D000947 ORTHO05D000079 1.5e-14 83.6 89 50.6
unitig_748.g8714 Utricularia gibba HOM05D000947 ORTHO05D000079 4.4e-14 82.0 56 69.6
vmacro15201 Vaccinium macrocarpon HOM05D000947 ORTHO05D000079 5.7e-14 81.6 81 56.8
Actinidia15578 Actinidia chinensis HOM05D000947 ORTHO05D000079 2.2e-13 79.7 107 48.6
Actinidia40348 Actinidia chinensis HOM05D000947 ORTHO05D000079 3.7e-13 79.0 107 46.7
Cfa015476 Carpinus fangiana HOM05D000947 ORTHO05D000079 8.2e-13 77.8 86 53.5
unitig_88.g27708 Utricularia gibba HOM05D000947 ORTHO05D000079 8.2e-13 77.8 75 60.0
Lsat_1_v5_gn_6_115200 Lactuca sativa HOM05D000947 ORTHO05D000079 1.1e-12 77.4 84 51.2
ECA233G3444 Erigeron canadensis HOM05D000947 ORTHO05D000079 1.4e-12 77.0 58 62.1
Rhsim04G0231900 Rhododendron simsii HOM05D000947 ORTHO05D000079 1.4e-12 77.0 54 70.4
Haze_01093 Corylus avellana HOM05D000947 ORTHO05D000079 1.8e-12 76.6 86 52.3
HanXRQChr13g0394421 Helianthus annuus HOM05D000947 ORTHO05D000079 1.8e-12 76.6 59 64.4
Nitab4.5_0005180g0060 Nicotiana tabacum HOM05D000947 ORTHO05D000079 4.1e-12 75.5 53 67.9
Sopen12g034040 Solanum pennellii HOM05D000947 ORTHO05D000079 5.3e-12 75.1 54 68.5
Cc03_g01210 Coffea canephora HOM05D000947 ORTHO05D000079 9.1e-12 74.3 43 76.7
unitig_32.g10638 Utricularia gibba HOM05D000947 ORTHO05D000079 9.1e-12 74.3 101 48.5
MD13G1159000 Malus domestica HOM05D000947 ORTHO05D000079 1.2e-11 73.9 84 53.6
Solyc12g099370.2 Solanum lycopersicum HOM05D000947 ORTHO05D000079 1.2e-11 73.9 54 66.7
CiPaw.02G077400 Carya illinoinensis HOM05D000947 ORTHO05D000079 1.6e-11 73.6 81 53.1
Prupe.1G126000 Prunus persica HOM05D000947 ORTHO05D000079 1.6e-11 73.6 84 53.6
PGSC0003DMG400004624 Solanum tuberosum HOM05D000947 ORTHO05D000079 2.0e-11 73.2 78 55.1
vmacro08079 Vaccinium macrocarpon HOM05D000947 ORTHO05D000079 2.0e-11 73.2 55 69.1
CAN.G1013.35 Capsicum annuum HOM05D000947 ORTHO05D000079 2.6e-11 72.8 81 51.9
HanXRQChr02g0049061 Helianthus annuus HOM05D000947 ORTHO05D000079 2.6e-11 72.8 59 62.7
Nitab4.5_0001097g0070 Nicotiana tabacum HOM05D000947 ORTHO05D000079 3.5e-11 72.4 81 50.6
Hma1.2p1_0078F.1_g040180 Hydrangea macrophylla HOM05D000947 ORTHO05D000079 4.5e-11 72.0 54 66.7
Peaxi162Scf00017g00611 Petunia axillaris HOM05D000947 ORTHO05D000079 4.5e-11 72.0 87 54.0
Nitab4.5_0003484g0090 Nicotiana tabacum HOM05D000947 ORTHO05D000079 5.9e-11 71.6 88 52.3
Sopen05g032880 Solanum pennellii HOM05D000947 ORTHO05D000079 5.9e-11 71.6 81 53.1
Lsat_1_v5_gn_6_19400 Lactuca sativa HOM05D000947 ORTHO05D000079 7.7e-11 71.2 84 48.8
unitig_32.g11857 Utricularia gibba HOM05D000947 ORTHO05D000079 7.7e-11 71.2 72 54.2
CANSAT78G2367 Cannabis sativa HOM05D000947 ORTHO05D000079 1.0e-10 70.9 54 63.0
GSVIVG01035048001 Vitis vinifera HOM05D000947 ORTHO05D000079 1.0e-10 70.9 58 63.8
CSS0035673 Camellia sinensis var. sinensis HOM05D000947 ORTHO05D000079 1.3e-10 70.5 54 64.8
MD16G1159200 Malus domestica HOM05D000947 ORTHO05D000079 1.3e-10 70.5 84 52.4
Nitab4.5_0000570g0300 Nicotiana tabacum HOM05D000947 ORTHO05D000079 1.7e-10 70.1 86 52.3
CAN.G484.54 Capsicum annuum HOM05D000947 ORTHO05D000079 2.2e-10 69.7 84 52.4
CAN.G1013.36 Capsicum annuum HOM05D000947 ORTHO05D000079 5.0e-10 68.6 78 52.6
CiPaw.01G142600 Carya illinoinensis HOM05D000947 ORTHO05D000079 5.0e-10 68.6 81 53.1
Peaxi162Scf00102g00111 Petunia axillaris HOM05D000947 ORTHO05D000079 5.0e-10 68.6 81 51.9
MELO3C006696.2 Cucumis melo HOM05D000947 ORTHO05D000079 6.5e-10 68.2 59 62.7
CsaV3_3G015000 Cucumis sativus L. HOM05D000947 ORTHO05D000079 6.5e-10 68.2 59 62.7
ClCG05G006370 Citrullus lanatus HOM05D000947 ORTHO05D000079 1.5e-09 67.0 59 62.7
Ciclev10006161m.g Citrus clementina HOM05D000947 ORTHO05D000079 1.5e-09 67.0 87 49.4
Solyc05g054400.3 Solanum lycopersicum HOM05D000947 ORTHO05D000079 1.5e-09 67.0 82 52.4
PGSC0003DMG400023434 Solanum tuberosum HOM05D000947 ORTHO05D000079 1.5e-09 67.0 82 52.4
Actinidia14268 Actinidia chinensis HOM05D000947 ORTHO05D000079 1.9e-09 66.6 55 60.0
DCAR_027021 Daucus carota HOM05D000947 ORTHO05D000079 1.9e-09 66.6 85 45.9
TAR362G0689 Trochodendron aralioides HOM05D000947 ORTHO05D000079 4.2e-09 65.5 58 60.3
Oeu016477.1 Olea europaea HOM05D000947 ORTHO05D000079 5.5e-09 65.1 67 55.2
Sabra08G0149800 Salix brachista HOM05D000947 ORTHO05D000079 7.2e-09 64.7 92 44.6
FvH4_4g19260 Fragaria vesca HOM05D000947 ORTHO05D000079 9.4e-09 64.3 51 60.8
FAN12G1806 Fragaria x ananassa HOM05D000947 ORTHO05D000079 9.4e-09 64.3 51 60.8
FAN12G3889 Fragaria x ananassa HOM05D000947 ORTHO05D000079 9.4e-09 64.3 51 60.8
Lj6A684T57 Lonicera japonica HOM05D000947 ORTHO05D000079 9.4e-09 64.3 64 56.2
Manes.03G201300 Manihot esculenta HOM05D000947 ORTHO05D000079 9.4e-09 64.3 54 57.4
Psat0s1646g0400 Pisum sativum HOM05D000947 ORTHO05D000079 1.2e-08 63.9 54 59.3
Potri.008G213900 Populus trichocarpa HOM05D000947 ORTHO05D000079 1.2e-08 63.9 54 59.3
Actinidia13373 Actinidia chinensis HOM05D000947 ORTHO05D000079 1.6e-08 63.5 106 40.6
Sed0006924 Sechium edule HOM05D000947 ORTHO05D000079 2.1e-08 63.2 58 60.3
DCAR_030484 Daucus carota HOM05D000947 ORTHO05D000079 2.7e-08 62.8 57 56.1
FAN07G1787 Fragaria x ananassa HOM05D000947 ORTHO05D000079 2.7e-08 62.8 51 58.8
Hma1.2p1_0013F.1_g008970 Hydrangea macrophylla HOM05D000947 ORTHO05D000079 2.7e-08 62.8 45 66.7
Nitab4.5_0007972g0010 Nicotiana tabacum HOM05D000947 ORTHO05D000079 2.7e-08 62.8 57 57.9
Oeu006436.1 Olea europaea HOM05D000947 ORTHO05D000079 2.7e-08 62.8 69 50.7
RcHm_v2.0_Chr4g0424251 Rosa chinensis HOM05D000947 ORTHO05D000079 2.7e-08 62.8 51 60.8
Manes.15G007100 Manihot esculenta HOM05D000947 ORTHO05D000079 4.7e-08 62.0 77 53.2
PGR031G2113 Punica granatum HOM05D000947 ORTHO05D000079 6.1e-08 61.6 54 59.3
Medtr4g121110 Medicago truncatula HOM05D000947 ORTHO05D000079 8.0e-08 61.2 55 61.8
Potri.010G001300 Populus trichocarpa HOM05D000947 ORTHO05D000079 1.0e-07 60.8 48 60.4
Sabra10G0001000 Salix brachista HOM05D000947 ORTHO05D000079 1.0e-07 60.8 55 58.2
Nn3g21608 Nelumbo nucifera HOM05D000947 ORTHO05D000079 1.4e-07 60.5 94 40.4
Thecc.04G294500 Theobroma cacao HOM05D000947 ORTHO05D000079 1.4e-07 60.5 86 46.5
TWI53G1518 Tripterygium wilfordii HOM05D000947 ORTHO05D000079 1.4e-07 60.5 55 56.4
Eucgr.H04023 Eucalyptus grandis HOM05D000947 ORTHO05D000079 1.8e-07 60.1 58 56.9
QL06p011255 Quercus lobata HOM05D000947 ORTHO05D000079 1.8e-07 60.1 81 45.7
Hund03096 Selenicereus undatus HOM05D000947 ORTHO05D000079 1.8e-07 60.1 89 43.8
Gohir.D02G057800 Gossypium hirsutum HOM05D000947 ORTHO05D000079 3.0e-07 59.3 100 40.0
Gorai.005G065300 Gossypium raimondii HOM05D000947 ORTHO05D000079 3.0e-07 59.3 100 40.0
Duzib151G1181 Durio zibethinus HOM05D000947 ORTHO05D000079 4.0e-07 58.9 88 45.5
Hund11950 Selenicereus undatus HOM05D000947 ORTHO05D000079 4.0e-07 58.9 56 55.4
Glyma.17G030900 Glycine max HOM05D000947 ORTHO05D000079 5.2e-07 58.5 59 54.2
Gohir.A02G052901 Gossypium hirsutum HOM05D000947 ORTHO05D000079 5.2e-07 58.5 100 40.0
Lj4g0003510 Lotus japonicus HOM05D000947 ORTHO05D000079 5.2e-07 58.5 54 53.7
Duzib212G0811 Durio zibethinus HOM05D000947 ORTHO05D000079 6.7e-07 58.2 86 44.2
VMungo1215G1095 Vigna mungo HOM05D000947 ORTHO05D000079 6.7e-07 58.2 93 43.0
BcaB07g34146 Brassica carinata HOM05D000947 ORTHO05D000079 8.8e-07 57.8 54 50.0
Duzib052G0902 Durio zibethinus HOM05D000947 ORTHO05D000079 8.8e-07 57.8 93 38.7
Lalb_Chr13g0298321 Lupinus albus HOM05D000947 ORTHO05D000079 8.8e-07 57.8 52 55.8
COL.COLO4_34678 Corchorus olitorius HOM05D000947 ORTHO05D000079 1.2e-06 57.4 91 42.9
TPR.G16825 Trifolium pratense HOM05D000947 ORTHO05D000079 1.2e-06 57.4 54 55.6
arahy.Tifrunner.gnm1.ann1.C126L3 Arachis hypogaea HOM05D000947 ORTHO05D000079 1.5e-06 57.0 54 51.9
A03p49600 Brassica napus HOM05D000947 ORTHO05D000079 1.5e-06 57.0 29 82.8
BraA03t14057Z Brassica rapa HOM05D000947 ORTHO05D000079 1.5e-06 57.0 29 82.8
Carub.0003s0628 Capsella rubella HOM05D000947 ORTHO05D000079 1.5e-06 57.0 96 38.5
Cpa.g.sc9.102 Carica papaya HOM05D000947 ORTHO05D000079 1.5e-06 57.0 64 50.0
TWI73G0953 Tripterygium wilfordii HOM05D000947 ORTHO05D000079 1.5e-06 57.0 86 41.9
Ah.04g154950 Amaranthus hybridus HOM05D000947 ORTHO05D000079 2.0e-06 56.6 76 44.7
arahy.Tifrunner.gnm1.ann1.36H91F Arachis hypogaea HOM05D000947 ORTHO05D000079 2.0e-06 56.6 54 51.9
arahy.Tifrunner.gnm1.ann1.FDN5YK Arachis hypogaea HOM05D000947 ORTHO05D000079 2.0e-06 56.6 53 52.8
arahy.Tifrunner.gnm1.ann1.QR3GWV Arachis hypogaea HOM05D000947 ORTHO05D000079 2.0e-06 56.6 54 51.9
MELO3C021288.2 Cucumis melo HOM05D000947 ORTHO05D000079 2.0e-06 56.6 81 45.7
CsaV3_6G022580 Cucumis sativus L. HOM05D000947 ORTHO05D000079 2.0e-06 56.6 81 45.7
TAR636G3276 Trochodendron aralioides HOM05D000947 ORTHO05D000079 2.0e-06 56.6 90 44.4
Carub.0008s0911 Capsella rubella HOM05D000947 ORTHO05D000079 2.6e-06 56.2 54 51.9
Gorai.002G029400 Gossypium raimondii HOM05D000947 ORTHO05D000079 2.6e-06 56.2 61 45.9
PGR004G0579 Punica granatum HOM05D000947 ORTHO05D000079 2.6e-06 56.2 54 55.6
Aa31LG8G3950 Aethionema arabicum HOM05D000947 ORTHO05D000079 3.3e-06 55.8 29 79.3
AT4G16141 Arabidopsis thaliana HOM05D000947 ORTHO05D000079 3.3e-06 55.8 29 79.3
EL10Ac3g04929 Beta vulgaris HOM05D000947 ORTHO05D000079 3.3e-06 55.8 76 43.4
BcaC06g32986 Brassica carinata HOM05D000947 ORTHO05D000079 3.3e-06 55.8 29 79.3
BcaC06g33468 Brassica carinata HOM05D000947 ORTHO05D000079 3.3e-06 55.8 29 79.3
A06p38440 Brassica napus HOM05D000947 ORTHO05D000079 3.3e-06 55.8 56 55.4
C07p47660 Brassica napus HOM05D000947 ORTHO05D000079 3.3e-06 55.8 29 79.3
BolC7t45289H Brassica oleracea HOM05D000947 ORTHO05D000079 3.3e-06 55.8 29 79.3
ECA246G1347 Erigeron canadensis HOM05D000947 ORTHO05D000079 3.3e-06 55.8 31 74.2
DCAR_002499 Daucus carota HOM05D000947 ORTHO05D000079 4.4e-06 55.5 57 47.4
Sed0004649 Sechium edule HOM05D000947 ORTHO05D000079 5.7e-06 55.1 25 88.0
AT5G49300 Arabidopsis thaliana HOM05D000947 ORTHO05D000079 7.5e-06 54.7 58 46.6
BcaC09g48646 Brassica carinata HOM05D000947 ORTHO05D000079 7.5e-06 54.7 30 76.7
BcaC09g50304 Brassica carinata HOM05D000947 ORTHO05D000079 7.5e-06 54.7 57 50.9
A01p37380 Brassica napus HOM05D000947 ORTHO05D000079 7.5e-06 54.7 30 76.7
C01p26820 Brassica napus HOM05D000947 ORTHO05D000079 7.5e-06 54.7 57 50.9
C01p47310 Brassica napus HOM05D000947 ORTHO05D000079 7.5e-06 54.7 30 76.7
BolC1t02626H Brassica oleracea HOM05D000947 ORTHO05D000079 7.5e-06 54.7 57 50.9
BolC1t04701H Brassica oleracea HOM05D000947 ORTHO05D000079 7.5e-06 54.7 30 76.7
BraA01t03796Z Brassica rapa HOM05D000947 ORTHO05D000079 7.5e-06 54.7 30 76.7
Glyma.07G243000 Glycine max HOM05D000947 ORTHO05D000079 7.5e-06 54.7 91 41.8
Phvul.003G110400 Phaseolus vulgaris HOM05D000947 ORTHO05D000079 7.5e-06 54.7 87 39.1
TWI09G0287 Tripterygium wilfordii HOM05D000947 ORTHO05D000079 7.5e-06 54.7 86 40.7
AL7G39020 Arabidopsis lyrata HOM05D000947 ORTHO05D000079 9.7e-06 54.3 54 53.7
Carub.0007s2546 Capsella rubella HOM05D000947 ORTHO05D000079 9.7e-06 54.3 54 53.7
CARHR222430 Cardamine hirsuta HOM05D000947 ORTHO05D000079 9.7e-06 54.3 54 53.7
ClCG06G004790 Citrullus lanatus HOM05D000947 ORTHO05D000079 9.7e-06 54.3 81 44.4
SHI00182 Sapria himalayana HOM05D000947 ORTHO05D000079 9.7e-06 54.3 35 62.9
Sp2g19650 Schrenkiella parvula HOM05D000947 ORTHO05D000079 9.7e-06 54.3 29 75.9


User provided reference genes

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