Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 2.4e-75 285.4 143 100.0
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 3.0e-62 241.9 146 84.9
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 4.4e-61 238.0 146 82.9
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 2.2e-60 235.7 142 82.4
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.5e-56 223.0 132 81.8
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 1.5e-56 223.0 147 76.2
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 1.9e-56 222.6 147 76.2
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 5.5e-56 221.1 141 76.6
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 2.7e-55 218.8 138 80.4
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 4.7e-55 218.0 139 76.3
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 1.0e-54 216.9 139 76.3
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 1.0e-54 216.9 149 76.5
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 4.0e-54 214.9 148 70.9
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 5.2e-54 214.5 139 74.8
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 8.8e-54 213.8 142 76.8
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 8.8e-54 213.8 128 80.5
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 1.5e-53 213.0 144 75.0
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 2.0e-53 212.6 142 75.4
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 4.4e-53 211.5 147 73.5
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 4.4e-53 211.5 144 72.2
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 4.4e-53 211.5 144 72.2
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 5.7e-53 211.1 140 74.3
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 5.7e-53 211.1 140 75.7
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 7.5e-53 210.7 143 73.4
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 9.7e-53 210.3 126 80.2
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 9.7e-53 210.3 140 73.6
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 1.3e-52 209.9 146 74.0
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 1.3e-52 209.9 132 76.5
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.7e-52 209.5 132 76.5
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 1.7e-52 209.5 141 73.8
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 2.2e-52 209.1 144 74.3
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 2.2e-52 209.1 144 73.6
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 3.7e-52 208.4 131 77.1
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 3.7e-52 208.4 137 75.2
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 4.8e-52 208.0 135 76.3
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 4.8e-52 208.0 129 78.3
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 4.8e-52 208.0 143 67.8
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 6.3e-52 207.6 132 75.0
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 6.3e-52 207.6 137 75.9
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 6.3e-52 207.6 140 74.3
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 1.1e-51 206.8 127 80.3
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.1e-51 206.8 136 75.7
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.4e-51 206.5 128 77.3
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 1.4e-51 206.5 142 71.8
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 2.4e-51 205.7 143 73.4
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 2.4e-51 205.7 128 78.9
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 3.1e-51 205.3 132 73.5
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 4.1e-51 204.9 127 77.2
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 5.3e-51 204.5 134 74.6
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 5.3e-51 204.5 127 76.4
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 7.0e-51 204.1 136 75.0
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 7.0e-51 204.1 131 74.0
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 9.1e-51 203.8 124 79.8
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 9.1e-51 203.8 136 74.3
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 1.2e-50 203.4 140 70.0
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 1.2e-50 203.4 142 73.2
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 1.6e-50 203.0 133 72.9
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 1.6e-50 203.0 141 73.8
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 2.7e-50 202.2 147 70.7
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 3.5e-50 201.8 146 71.9
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 3.5e-50 201.8 134 74.6
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 3.5e-50 201.8 143 73.4
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 5.9e-50 201.1 143 69.9
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 5.9e-50 201.1 144 71.5
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 7.7e-50 200.7 140 68.6
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 7.7e-50 200.7 134 73.9
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 1.3e-49 199.9 142 65.5
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 4.2e-48 194.9 134 72.4
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 9.4e-48 193.7 139 71.9
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 9.4e-48 193.7 139 71.9
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.2e-47 193.4 148 68.9
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 4.7e-47 191.4 126 71.4
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 3.0e-46 188.7 129 71.3
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 3.0e-46 188.7 144 64.6
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 2.0e-45 186.0 142 64.8
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 2.0e-45 186.0 129 69.0
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 2.6e-45 185.7 145 64.8
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 4.4e-45 184.9 136 69.9
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 9.8e-45 183.7 129 69.0
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 3.7e-44 181.8 136 66.2
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 6.3e-44 181.0 129 66.7
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 6.3e-44 181.0 129 66.7
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 1.1e-43 180.3 129 66.7
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 1.4e-43 179.9 129 65.9
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 1.4e-43 179.9 129 65.9
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 1.4e-43 179.9 129 65.9
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 3.1e-43 178.7 132 65.9
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 9.1e-43 177.2 128 68.8
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 2.0e-42 176.0 205 48.3
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 5.9e-42 174.5 136 64.7
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 6.5e-41 171.0 143 64.3
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 2.6e-37 159.1 99 78.8
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 1.9e-32 142.9 144 50.7
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 5.6e-32 141.4 87 82.8
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.7e-28 129.8 109 57.8
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 1.8e-27 126.3 96 66.7
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 3.2e-27 125.6 152 47.4
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 7.0e-27 124.4 83 68.7
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 1.6e-26 123.2 156 44.2
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 4.6e-26 121.7 126 54.8
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.1e-24 117.1 137 50.4
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.2e-21 107.1 69 68.1
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 1.3e-20 103.6 131 45.8
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.3e-17 93.6 69 65.2
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 2.1e-15 86.3 125 39.2
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 4.7e-15 85.1 143 34.3
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 9.9e-13 77.4 57 63.2
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 2.9e-12 75.9 86 46.5
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 3.2e-11 72.4 132 38.6
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 6.2e-07 58.2 40 72.5
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 4.0e-06 55.5 86 34.9
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 8.9e-06 54.3 27 85.2


User provided reference genes

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