Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G2018 Salvia bowleyana HOM05D000237 ORTHO05D006530 0.0e+00 3041.9 1735 100.0
SalBow7G1767 Salvia bowleyana HOM05D000237 ORTHO05D006530 0.0e+00 2964.9 1653 99.5
Migut.C01070 Erythranthe guttata HOM05D000237 ORTHO05D006530 2.9e-279 966.5 1460 46.0
SGA_v2.0_scaffold52G18914 Striga asiatica HOM05D000237 ORTHO05D006530 1.9e-193 681.4 1795 34.2
CSS0037931 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D006530 8.0e-144 516.5 779 45.8
Dinv27266 Davidia involucrata HOM05D000237 ORTHO05D006530 4.7e-136 490.7 767 45.9
Dinv14699 Davidia involucrata HOM05D000237 ORTHO05D006530 3.5e-131 474.6 622 50.3
Rhsim06G0089600 Rhododendron simsii HOM05D000237 ORTHO05D006530 1.0e-130 473.0 764 44.0
GSVIVG01008802001 Vitis vinifera HOM05D000237 ORTHO05D006530 4.3e-129 467.6 800 42.9
Prupe.1G489000 Prunus persica HOM05D000237 ORTHO05D006530 4.7e-128 464.2 640 48.1
CiPaw.15G030900 Carya illinoinensis HOM05D000237 ORTHO05D006530 5.8e-126 457.2 895 39.7
Thecc.08G133600 Theobroma cacao HOM05D000237 ORTHO05D006530 1.3e-125 456.1 826 41.5
Actinidia21273 Actinidia chinensis HOM05D000237 ORTHO05D006530 2.9e-125 454.9 1238 35.0
Atru.chr13.1586 Acer truncatum HOM05D000237 ORTHO05D006530 3.2e-124 451.4 756 43.8
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 5.4e-124 450.7 910 39.9
Sabra02G0061100 Salix brachista HOM05D000237 ORTHO05D006530 9.2e-124 449.9 787 42.9
FvH4_2g27950 Fragaria vesca HOM05D000237 ORTHO05D006530 1.7e-122 445.7 759 42.0
FAN24G1388 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.7e-122 445.7 759 42.0
Potri.005G182900 Populus trichocarpa HOM05D000237 ORTHO05D006530 6.6e-122 443.7 666 45.8
Ciclev10000009m.g Citrus clementina HOM05D000237 ORTHO05D006530 1.2e-120 439.5 876 40.2
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.2e-120 439.5 761 41.5
Gorai.009G249000 Gossypium raimondii HOM05D000237 ORTHO05D006530 2.1e-120 438.7 861 39.4
Gohir.D05G240100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 3.6e-120 438.0 860 39.5
MD15G1133400 Malus domestica HOM05D000237 ORTHO05D006530 3.6e-120 438.0 630 45.9
TAR628G1620 Trochodendron aralioides HOM05D000237 ORTHO05D006530 1.4e-119 436.0 792 41.3
FAN27G0451 Fragaria x ananassa HOM05D000237 ORTHO05D006530 2.3e-119 435.3 760 42.0
Gohir.A05G238100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 2.3e-119 435.3 866 39.4
Nitab4.5_0003485g0030 Nicotiana tabacum HOM05D000237 ORTHO05D006530 2.3e-119 435.3 838 41.8
FAN20G2323 Fragaria x ananassa HOM05D000237 ORTHO05D006530 4.0e-119 434.5 761 41.4
Cc10_g13690 Coffea canephora HOM05D000237 ORTHO05D006530 1.2e-118 433.0 857 38.7
Peaxi162Scf00066g00427 Petunia axillaris HOM05D000237 ORTHO05D006530 1.5e-118 432.6 1013 37.7
COL.COLO4_07934 Corchorus olitorius HOM05D000237 ORTHO05D006530 3.7e-117 427.9 614 46.9
Cfa018423 Carpinus fangiana HOM05D000237 ORTHO05D001145 6.4e-117 427.2 895 39.0
RcHm_v2.0_Chr6g0296771 Rosa chinensis HOM05D000237 ORTHO05D006530 1.1e-116 426.4 800 40.4
Duzib093G2205 Durio zibethinus HOM05D000237 ORTHO05D006530 1.4e-116 426.0 770 41.2
QL09p032246 Quercus lobata HOM05D000237 ORTHO05D006530 1.4e-116 426.0 759 41.6
COL.COLO4_07936 Corchorus olitorius HOM05D000237 ORTHO05D006530 1.9e-116 425.6 589 48.4
Glyma.13G034600 Glycine max HOM05D000237 ORTHO05D006530 2.4e-116 425.2 638 45.5
TWI32G0010 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 3.5e-115 421.4 738 42.7
Glyma.14G155900 Glycine max HOM05D000237 ORTHO05D006530 7.8e-115 420.2 635 45.8
Potri.002G077700 Populus trichocarpa HOM05D000237 ORTHO05D006530 5.6e-113 414.1 800 40.0
TWI34G0547 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 7.3e-113 413.7 689 43.4
VMungo0647G1100 Vigna mungo HOM05D000237 ORTHO05D006530 5.2e-111 407.5 783 40.9
Sopen04g025850 Solanum pennellii HOM05D000237 ORTHO05D006530 6.8e-111 407.1 821 40.2
Ca_12643_v3 Cicer arietinum L. HOM05D000237 ORTHO05D001145 8.9e-111 406.8 855 38.0
Duzib041G0809 Durio zibethinus HOM05D000237 ORTHO05D006530 1.2e-110 406.4 820 39.5
Hma1.2p1_0880F.1_g231830 Hydrangea macrophylla HOM05D000237 ORTHO05D006530 1.2e-110 406.4 553 47.4
CANSAT25G1894 Cannabis sativa HOM05D000237 ORTHO05D006530 5.8e-110 404.1 777 39.6
Lalb_Chr04g0253551 Lupinus albus HOM05D000237 ORTHO05D006530 1.7e-109 402.5 631 43.4
Haze_17641 Corylus avellana HOM05D000237 ORTHO05D006530 6.4e-109 400.6 1006 36.1
Solyc04g057990.4 Solanum lycopersicum HOM05D000237 ORTHO05D006530 6.4e-109 400.6 828 39.1
AT1G21580 Arabidopsis thaliana HOM05D000237 ORTHO05D006530 8.4e-109 400.2 632 43.2
Thhalv10006523m.g Eutrema salsugineum HOM05D000237 ORTHO05D006530 4.2e-108 397.9 601 44.3
Phvul.001G067600 Phaseolus vulgaris HOM05D000237 ORTHO05D006530 4.2e-108 397.9 773 39.7
Carub.0001s2101 Capsella rubella HOM05D000237 ORTHO05D006530 1.2e-107 396.4 628 43.3
MBI03_g13492_MAGBIO Magnolia biondii HOM05D000237 ORTHO05D006530 2.7e-107 395.2 857 38.2
Lj1g0018506 Lotus japonicus HOM05D000237 ORTHO05D006530 4.6e-107 394.4 706 42.4
DCAR_003591 Daucus carota HOM05D000237 ORTHO05D006530 7.8e-107 393.7 692 42.3
AL1G34720 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 6.6e-106 390.6 612 44.4
BcaC05g26074 Brassica carinata HOM05D000237 ORTHO05D006530 1.1e-105 389.8 603 44.3
C05p20570 Brassica napus HOM05D000237 ORTHO05D006530 1.6e-104 386.0 613 43.4
BolC5t30755H Brassica oleracea HOM05D000237 ORTHO05D006530 2.1e-104 385.6 613 43.4
CARHR021940 Cardamine hirsuta HOM05D000237 ORTHO05D006530 2.8e-104 385.2 621 43.2
PGR044G0116 Punica granatum HOM05D000237 ORTHO05D006530 2.8e-104 385.2 784 38.0
Medtr1g029710 Medicago truncatula HOM05D000237 ORTHO05D006530 1.4e-103 382.9 779 38.3
TPR.G30554 Trifolium pratense HOM05D000237 ORTHO05D006530 1.4e-103 382.9 701 40.8
Nitab4.5_0000317g0120 Nicotiana tabacum HOM05D000237 ORTHO05D006530 1.8e-103 382.5 930 37.3
Psat6g040880 Pisum sativum HOM05D000237 ORTHO05D006530 1.8e-103 382.5 862 37.4
Duzib116G0766 Durio zibethinus HOM05D000237 ORTHO05D006530 3.1e-103 381.7 633 44.5
THA.LOC104812079 Tarenaya hassleriana HOM05D000237 ORTHO05D006530 3.1e-103 381.7 599 44.2
Aqoxy6G00305 Aquilegia oxysepala HOM05D000237 ORTHO05D006530 4.0e-103 381.3 775 39.2
Eucgr.E01003 Eucalyptus grandis HOM05D000237 ORTHO05D006530 1.5e-102 379.4 600 44.2
Sp1g19110 Schrenkiella parvula HOM05D000237 ORTHO05D006530 2.0e-102 379.0 615 42.3
arahy.Tifrunner.gnm1.ann1.8V8SFL Arachis hypogaea HOM05D000237 ORTHO05D006530 3.4e-102 378.3 668 42.1
A06p17660 Brassica napus HOM05D000237 ORTHO05D006530 5.8e-102 377.5 441 51.5
EL10Ac1g01364 Beta vulgaris HOM05D000237 ORTHO05D006530 2.9e-101 375.2 884 35.4
arahy.Tifrunner.gnm1.ann1.JKU5X8 Arachis hypogaea HOM05D000237 ORTHO05D006530 1.1e-100 373.2 669 41.6
Nn5g28444 Nelumbo nucifera HOM05D000237 ORTHO05D006530 1.2e-99 369.8 925 35.4
C08p20910 Brassica napus HOM05D000237 ORTHO05D006530 2.1e-99 369.0 596 42.1
BolC8t49729H Brassica oleracea HOM05D000237 ORTHO05D006530 3.0e-98 365.2 596 42.1
AUR62013435 Chenopodium quinoa HOM05D000237 ORTHO05D006530 3.0e-98 365.2 804 36.2
HanXRQChr09g0256631 Helianthus annuus HOM05D000237 ORTHO05D006530 3.0e-98 365.2 721 40.2
A08p28930 Brassica napus HOM05D000987 ORTHO05D006530 4.5e-94 351.3 597 40.9
BraA08t34823Z Brassica rapa HOM05D000237 ORTHO05D006530 4.5e-94 351.3 597 40.9
PSO170G5097 Papaver somniferum HOM05D000237 ORTHO05D006530 4.9e-93 347.8 611 42.2
ATR1001G008 Amborella trichopoda HOM05D000237 ORTHO05D006530 1.6e-91 342.8 628 39.8
ECA232G3457 Erigeron canadensis HOM05D000237 ORTHO05D006530 2.7e-91 342.0 724 39.0
Cpa.g.sc1156.4 Carica papaya HOM05D000237 ORTHO05D006530 3.9e-90 338.2 304 62.2
PSO528G0213 Papaver somniferum HOM05D000237 ORTHO05D006530 1.3e-88 333.2 623 41.1
Hund17350 Selenicereus undatus HOM05D000237 ORTHO05D006530 4.5e-86 324.7 775 35.4
CsaV3_7G022160 Cucumis sativus L. HOM05D000237 ORTHO05D006530 3.8e-85 321.6 786 34.9
Ah.05g169070 Amaranthus hybridus HOM05D000237 ORTHO05D006530 6.4e-85 320.9 876 32.2
MELO3C012713.2 Cucumis melo HOM05D000237 ORTHO05D006530 3.5e-83 315.1 764 34.7
Aa31LG7G5550 Aethionema arabicum HOM05D000237 ORTHO05D006530 1.9e-81 309.3 668 36.8
Sc20g0002700 Simmondsia chinensis HOM05D000237 ORTHO05D006530 7.4e-81 307.4 318 54.7
Sed0005866 Sechium edule HOM05D000237 ORTHO05D006530 8.2e-80 303.9 768 34.6
Lsat_1_v5_gn_4_135201 Lactuca sativa HOM05D000237 ORTHO05D006530 3.5e-75 288.5 621 37.5
CDE08G0007 Ceratophyllum demersum HOM05D000237 ORTHO05D006530 3.9e-74 285.0 603 36.5
arahy.Tifrunner.gnm1.ann1.A7GBNY Arachis hypogaea HOM05D000237 ORTHO05D006530 1.2e-67 263.5 615 35.4
vmacro21123 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 2.7e-67 262.3 314 52.9
Manes.18G083000 Manihot esculenta HOM05D000237 ORTHO05D006530 4.6e-67 261.5 789 33.7
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 1.8e-66 259.6 566 36.4
arahy.Tifrunner.gnm1.ann1.6HV4D5 Arachis hypogaea HOM05D000237 ORTHO05D006530 5.7e-65 254.6 596 36.7
arahy.Tifrunner.gnm1.ann1.S57KMF Arachis hypogaea HOM05D000237 ORTHO05D006530 6.3e-64 251.1 547 37.7
SEGI_16153 Sequoiadendron giganteum HOM05D000237 ORTHO05D006530 1.4e-63 250.0 257 54.5
Zm00001eb387360 Zea mays HOM05D000237 ORTHO05D006530 7.7e-62 244.2 728 29.5
Mapoly0097s0070 Marchantia polymorpha HOM05D000237 ORTHO05D006530 7.9e-59 234.2 456 39.3
Os06g0638000 Oryza sativa ssp. japonica HOM05D000237 ORTHO05D006530 1.4e-58 233.4 660 31.1
SMO367G0550 Selaginella moellendorffii HOM05D000237 ORTHO05D006530 1.8e-58 233.0 246 54.5
PGSC0003DMG401025318 Solanum tuberosum HOM05D000237 ORTHO05D006530 4.5e-54 218.4 687 33.9
AL2G37460 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 2.2e-53 216.1 491 35.6
Oeu045950.1 Olea europaea HOM05D000237 ORTHO05D006530 5.0e-53 214.9 380 42.9
ClCG09G021810 Citrullus lanatus HOM05D000237 ORTHO05D006530 5.5e-52 211.5 771 30.6
HPP92_004772 Vanilla planifolia HOM05D000237 ORTHO05D006530 4.8e-48 198.4 619 32.0
unitig_46.g18088 Utricularia gibba HOM05D000237 ORTHO05D006530 1.3e-40 173.7 559 28.8
CARHR070760 Cardamine hirsuta HOM05D000237 ORTHO05D006530 1.4e-39 170.2 222 46.8
CBR_g18950 Chara braunii HOM05D000237 ORTHO05D006530 7.0e-39 167.9 393 33.6
Pp3c2_14590 Physcomitrium patens HOM05D000237 ORTHO05D006530 1.6e-38 166.8 451 32.8
SHI09235 Sapria himalayana HOM05D000237 ORTHO05D006530 1.8e-34 153.3 92 75.0
TPR.G40837 Trifolium pratense HOM05D000237 ORTHO05D006530 2.3e-34 152.9 136 62.5
AUR62007706 Chenopodium quinoa HOM05D000237 ORTHO05D006530 2.0e-33 149.8 615 29.8
Oeu030983.1 Olea europaea HOM05D000237 ORTHO05D006530 2.3e-29 136.3 99 77.8
TPR.G4655 Trifolium pratense HOM05D000237 ORTHO05D013217 1.9e-28 133.3 81 81.5
MD08G1160000 Malus domestica HOM05D000237 ORTHO05D006530 3.3e-20 105.9 115 48.7
vmacro21124 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 9.5e-20 104.4 338 30.8
Oeu047172.1 Olea europaea HOM05D000237 ORTHO05D006530 4.0e-18 99.0 139 44.6
LjContig00357g0005900 Lotus japonicus HOM05D000237 ORTHO05D005612 1.1e-12 80.9 499 25.9
Sc20g0002720 Simmondsia chinensis HOM05D000237 ORTHO05D006530 2.3e-10 73.2 117 42.7
Cpa.g.sc1156.5 Carica papaya HOM05D000237 ORTHO05D006530 1.3e-08 67.4 348 27.0


User provided reference genes

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