Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 5.7e-80 301.2 193 100.0
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 8.0e-58 227.6 191 76.4
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 1.7e-52 209.9 192 76.0
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 7.2e-51 204.5 193 68.9
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 7.2e-51 204.5 189 69.3
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 6.1e-50 201.4 194 72.2
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 2.3e-49 199.5 154 81.8
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 5.2e-49 198.4 197 68.0
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 8.8e-49 197.6 193 68.9
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 3.4e-48 195.7 174 70.7
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 3.4e-48 195.7 193 68.4
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 3.4e-48 195.7 193 68.4
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 3.4e-48 195.7 198 70.7
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 5.7e-48 194.9 196 66.8
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 7.5e-48 194.5 191 68.6
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 9.7e-48 194.1 192 67.7
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 8.3e-47 191.0 200 66.0
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 1.4e-46 190.3 198 64.1
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 2.4e-46 189.5 191 66.0
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 3.1e-46 189.1 193 66.3
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 3.1e-46 189.1 199 66.8
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 4.1e-46 188.7 202 64.9
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 7.0e-46 188.0 199 64.8
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 7.0e-46 188.0 199 64.8
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 7.0e-46 188.0 199 64.8
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 9.1e-46 187.6 194 65.5
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 1.2e-45 187.2 202 63.9
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 3.5e-45 185.7 200 64.0
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 7.7e-45 184.5 194 67.5
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 1.0e-44 184.1 189 65.6
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 1.3e-44 183.7 174 70.1
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 1.3e-44 183.7 174 67.8
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 2.2e-44 183.0 195 66.2
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 2.2e-44 183.0 156 75.0
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 2.9e-44 182.6 192 64.6
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 6.5e-44 181.4 149 77.9
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 6.5e-44 181.4 187 65.2
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 6.5e-44 181.4 196 63.3
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 6.5e-44 181.4 156 73.1
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 6.5e-44 181.4 155 73.5
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 8.5e-44 181.0 156 73.1
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 1.1e-43 180.6 195 62.6
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 1.1e-43 180.6 154 74.7
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 1.5e-43 180.3 172 68.0
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 1.5e-43 180.3 156 72.4
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 1.9e-43 179.9 195 65.1
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 2.5e-43 179.5 156 71.8
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 2.5e-43 179.5 156 71.8
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 2.5e-43 179.5 156 71.8
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 2.5e-43 179.5 155 74.2
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 3.2e-43 179.1 202 63.4
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 5.5e-43 178.3 156 71.8
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 7.2e-43 177.9 156 71.8
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 7.2e-43 177.9 156 71.8
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 7.2e-43 177.9 156 71.8
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 7.2e-43 177.9 192 64.1
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 7.2e-43 177.9 203 66.0
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 9.4e-43 177.6 151 75.5
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 9.4e-43 177.6 198 61.1
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 9.4e-43 177.6 156 71.8
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 9.4e-43 177.6 156 70.5
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 9.4e-43 177.6 156 71.8
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 1.6e-42 176.8 197 62.4
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 1.6e-42 176.8 149 75.8
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 2.1e-42 176.4 173 66.5
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 2.7e-42 176.0 196 60.7
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 2.7e-42 176.0 156 73.1
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 3.6e-42 175.6 195 65.1
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 4.7e-42 175.3 180 63.9
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 4.7e-42 175.3 192 63.0
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 6.1e-42 174.9 158 70.9
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 6.1e-42 174.9 156 69.9
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 6.1e-42 174.9 198 60.6
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 1.0e-41 174.1 147 75.5
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 1.0e-41 174.1 156 70.5
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 1.4e-41 173.7 200 60.5
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 1.4e-41 173.7 203 60.6
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.4e-41 173.7 173 65.9
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 1.4e-41 173.7 197 60.9
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 1.8e-41 173.3 155 71.0
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 2.3e-41 172.9 158 72.8
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 2.3e-41 172.9 156 69.2
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 3.0e-41 172.6 156 69.9
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 4.0e-41 172.2 156 69.2
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 4.0e-41 172.2 197 62.4
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 5.2e-41 171.8 202 57.9
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 1.2e-40 170.6 158 70.9
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 1.5e-40 170.2 176 65.3
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 2.6e-40 169.5 155 72.9
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 5.7e-40 168.3 150 70.7
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 5.7e-40 168.3 156 67.9
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 5.7e-40 168.3 156 67.9
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 7.5e-40 167.9 156 68.6
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 1.3e-39 167.2 158 67.7
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 1.3e-39 167.2 193 57.0
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 1.3e-39 167.2 155 70.3
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 2.8e-39 166.0 148 71.6
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 1.8e-38 163.3 196 58.7
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 1.7e-36 156.8 193 54.9
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 5.0e-36 155.2 156 63.5
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 8.6e-36 154.5 156 64.7
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 2.5e-35 152.9 193 56.0
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 7.2e-35 151.4 134 72.4
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 3.6e-34 149.1 186 54.8
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 1.5e-32 143.7 174 64.4
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 7.5e-32 141.4 158 62.7
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 3.9e-28 129.0 173 59.0
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 2.8e-26 122.9 152 56.6
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.2e-24 117.5 103 60.2
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 1.3e-23 114.0 156 54.5
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 3.5e-21 105.9 150 53.3
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 3.9e-20 102.4 153 51.0
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 3.3e-19 99.4 127 52.0
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 5.6e-19 98.6 188 46.3
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 4.7e-18 95.5 103 67.0
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 8.1e-18 94.7 53 79.2
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 3.7e-15 85.9 140 49.3
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 8.3e-15 84.7 110 50.0
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 1.0e-12 77.8 155 43.2
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 2.8e-10 69.7 110 49.1
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 4.4e-08 62.4 153 46.4


User provided reference genes

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