Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G4254 Salvia bowleyana HOM05D006381 ORTHO05D008523 4.4e-62 241.1 121 100.0
MSTRG.6465 Avicennia marina HOM05D006381 ORTHO05D008523 3.0e-26 122.1 109 59.6
Nitab4.5_0000016g0250 Nicotiana tabacum HOM05D006381 ORTHO05D008523 1.9e-25 119.4 111 58.6
CAN.G316.6 Capsicum annuum HOM05D006381 ORTHO05D008523 2.8e-24 115.5 98 60.2
SGA_v2.0_scaffold105G30477 Striga asiatica HOM05D006381 ORTHO05D005344 3.6e-24 115.2 88 67.0
Dinv14276 Davidia involucrata HOM05D006381 ORTHO05D008523 3.1e-23 112.1 107 55.1
Oeu033185.1 Olea europaea HOM05D006381 ORTHO05D008523 4.0e-23 111.7 98 58.2
PGSC0003DMG400011846 Solanum tuberosum HOM05D006381 ORTHO05D008523 5.2e-23 111.3 102 60.8
Solyc03g053110.3 Solanum lycopersicum HOM05D006381 ORTHO05D008523 3.4e-22 108.6 101 59.4
Sopen03g011700 Solanum pennellii HOM05D006381 ORTHO05D008523 4.4e-22 108.2 98 61.2
Migut.J01817 Erythranthe guttata HOM05D006381 ORTHO05D008523 7.5e-22 107.5 100 60.0
GSVIVG01033526001 Vitis vinifera HOM05D006381 ORTHO05D008523 9.8e-22 107.1 108 52.8
THA.LOC104802431 Tarenaya hassleriana HOM05D006381 ORTHO05D008523 1.3e-21 106.7 99 60.6
Eucgr.K01824 Eucalyptus grandis HOM05D006381 ORTHO05D008523 2.9e-21 105.5 102 56.9
Potri.006G059200 Populus trichocarpa HOM05D006381 ORTHO05D008523 2.9e-21 105.5 108 56.5
Actinidia09382 Actinidia chinensis HOM05D006381 ORTHO05D008523 4.9e-21 104.8 103 55.3
Gorai.002G225000 Gossypium raimondii HOM05D006381 ORTHO05D008523 1.1e-20 103.6 100 59.0
Gohir.A01G191900 Gossypium hirsutum HOM05D006381 ORTHO05D008523 1.9e-20 102.8 100 58.0
Gohir.D01G178100 Gossypium hirsutum HOM05D006381 ORTHO05D008523 2.4e-20 102.4 100 58.0
Aa31LG1G24050 Aethionema arabicum HOM05D006381 ORTHO05D008523 4.1e-20 101.7 107 55.1
ClCG04G000940 Citrullus lanatus HOM05D006381 ORTHO05D008523 5.4e-20 101.3 93 57.0
CsaV3_4G031300 Cucumis sativus L. HOM05D006381 ORTHO05D008523 5.4e-20 101.3 110 52.7
Duzib128G0127 Durio zibethinus HOM05D006381 ORTHO05D008523 7.0e-20 100.9 102 52.9
QL07p023132 Quercus lobata HOM05D006381 ORTHO05D008523 7.0e-20 100.9 106 52.8
MELO3C009019.2 Cucumis melo HOM05D006381 ORTHO05D008523 9.2e-20 100.5 95 54.7
MD14G1060800 Malus domestica HOM05D006381 ORTHO05D008523 1.2e-19 100.1 106 52.8
Nn2g15584 Nelumbo nucifera HOM05D006381 ORTHO05D008523 1.2e-19 100.1 103 55.3
unitig_21.g20909 Utricularia gibba HOM05D006381 ORTHO05D008523 1.2e-19 100.1 95 56.8
Phvul.001G140700 Phaseolus vulgaris HOM05D006381 ORTHO05D008523 1.6e-19 99.8 104 52.9
arahy.Tifrunner.gnm1.ann1.427FHC Arachis hypogaea HOM05D006381 ORTHO05D008523 2.0e-19 99.4 95 54.7
arahy.Tifrunner.gnm1.ann1.7X1X2Z Arachis hypogaea HOM05D006381 ORTHO05D008523 2.7e-19 99.0 95 55.8
CSS0049124 Camellia sinensis var. sinensis HOM05D006381 ORTHO05D008523 2.7e-19 99.0 74 59.5
CANSAT64G2218 Cannabis sativa HOM05D006381 ORTHO05D008523 2.7e-19 99.0 102 56.9
Atru.chr8.1049 Acer truncatum HOM05D006381 ORTHO05D008523 3.5e-19 98.6 83 57.8
Cc00_g14590 Coffea canephora HOM05D006381 ORTHO05D008523 3.5e-19 98.6 109 50.5
ECA247G3115 Erigeron canadensis HOM05D006381 ORTHO05D008523 4.6e-19 98.2 100 52.0
Lj1g0008226 Lotus japonicus HOM05D006381 ORTHO05D008523 4.6e-19 98.2 93 57.0
TAR633G2259 Trochodendron aralioides HOM05D006381 ORTHO05D008523 4.6e-19 98.2 63 73.0
BcaB06g29230 Brassica carinata HOM05D006381 ORTHO05D008523 6.0e-19 97.8 109 52.3
A04p32060 Brassica napus HOM05D006381 ORTHO05D008523 6.0e-19 97.8 107 54.2
BraA04t18663Z Brassica rapa HOM05D006381 ORTHO05D008523 6.0e-19 97.8 107 54.2
CiPaw.09G032200 Carya illinoinensis HOM05D006381 ORTHO05D008523 6.0e-19 97.8 102 52.9
Aqoxy2G00059 Aquilegia oxysepala HOM05D006381 ORTHO05D008523 7.8e-19 97.4 60 68.3
PGR142G4202 Punica granatum HOM05D006381 ORTHO05D008523 7.8e-19 97.4 110 50.9
Hund19189 Selenicereus undatus HOM05D006381 ORTHO05D008523 7.8e-19 97.4 101 51.5
Thecc.05G168200 Theobroma cacao HOM05D006381 ORTHO05D008523 7.8e-19 97.4 102 53.9
C04p69580 Brassica napus HOM05D006381 ORTHO05D008523 1.3e-18 96.7 109 52.3
MD12G1061100 Malus domestica HOM05D006381 ORTHO05D008523 1.3e-18 96.7 105 52.4
VMungo1383G2147 Vigna mungo HOM05D006381 ORTHO05D008523 1.3e-18 96.7 104 51.9
Atru.BG.211.p Acer truncatum HOM05D006381 ORTHO05D008523 1.7e-18 96.3 62 71.0
Haze_19961 Corylus avellana HOM05D006381 ORTHO05D008523 3.9e-18 95.1 118 45.8
Thhalv10017186m.g Eutrema salsugineum HOM05D006381 ORTHO05D008523 3.9e-18 95.1 107 51.4
Sp4g24400 Schrenkiella parvula HOM05D006381 ORTHO05D008523 3.9e-18 95.1 107 49.5
HanXRQChr10g0295701 Helianthus annuus HOM05D006381 ORTHO05D008523 5.0e-18 94.7 97 50.5
PSO675G4699 Papaver somniferum HOM05D006381 ORTHO05D008523 5.0e-18 94.7 107 50.5
Nitab4.5_0003572g0070 Nicotiana tabacum HOM05D006381 ORTHO05D008523 6.6e-18 94.4 94 56.4
Sabra06G0042600 Salix brachista HOM05D006381 ORTHO05D008523 6.6e-18 94.4 62 67.7
AUR62024330 Chenopodium quinoa HOM05D006381 ORTHO05D008523 8.6e-18 94.0 57 70.2
FvH4_6g22700 Fragaria vesca HOM05D006381 ORTHO05D008523 8.6e-18 94.0 112 50.0
FAN09G4702 Fragaria x ananassa HOM05D006381 ORTHO05D008523 8.6e-18 94.0 114 46.5
EL10Ac3g06950 Beta vulgaris HOM05D006381 ORTHO05D008523 1.1e-17 93.6 98 49.0
FAN02G4230 Fragaria x ananassa HOM05D006381 ORTHO05D008523 1.1e-17 93.6 114 46.5
FAN14G0786 Fragaria x ananassa HOM05D006381 ORTHO05D008523 1.1e-17 93.6 114 46.5
Lsat_1_v5_gn_9_27981 Lactuca sativa HOM05D006381 ORTHO05D008523 1.1e-17 93.6 97 47.4
Lj2A371T35 Lonicera japonica HOM05D006381 ORTHO05D008523 1.1e-17 93.6 90 53.3
MBI04_g27128_MAGBIO Magnolia biondii HOM05D006381 ORTHO05D008523 1.1e-17 93.6 67 61.2
Manes.08G046500 Manihot esculenta HOM05D006381 ORTHO05D008523 1.1e-17 93.6 107 47.7
RcHm_v2.0_Chr3g0480311 Rosa chinensis HOM05D006381 ORTHO05D008523 1.1e-17 93.6 108 50.9
Sed0015308 Sechium edule HOM05D006381 ORTHO05D008523 1.1e-17 93.6 93 50.5
AL4G40580 Arabidopsis lyrata HOM05D006381 ORTHO05D008523 1.5e-17 93.2 112 50.9
AUR62012069 Chenopodium quinoa HOM05D006381 ORTHO05D008523 1.5e-17 93.2 88 55.7
Ca_08505_v3 Cicer arietinum L. HOM05D006381 ORTHO05D008523 1.5e-17 93.2 101 52.5
FAN05G1475 Fragaria x ananassa HOM05D006381 ORTHO05D008523 1.5e-17 93.2 114 46.5
FAN14G1353 Fragaria x ananassa HOM05D006381 ORTHO05D008523 1.5e-17 93.2 109 47.7
BcaC02g07256 Brassica carinata HOM05D006381 ORTHO05D008523 1.9e-17 92.8 108 52.8
BolC4t28456H Brassica oleracea HOM05D006381 ORTHO05D008523 1.9e-17 92.8 108 52.8
Cfa016899 Carpinus fangiana HOM05D006381 ORTHO05D008523 1.9e-17 92.8 76 56.6
Lju124A30T11 Lonicera japonica HOM05D006381 ORTHO05D008523 1.9e-17 92.8 98 48.0
TWI74G0881 Tripterygium wilfordii HOM05D006381 ORTHO05D008523 1.9e-17 92.8 62 66.1
COL.COLO4_36132 Corchorus olitorius HOM05D006381 ORTHO05D008523 2.5e-17 92.4 68 60.3
Prupe.7G073600 Prunus persica HOM05D006381 ORTHO05D008523 2.5e-17 92.4 74 60.8
Carub.0004s2456 Capsella rubella HOM05D006381 ORTHO05D008523 3.3e-17 92.0 109 49.5
CARHR137260 Cardamine hirsuta HOM05D006381 ORTHO05D008523 3.3e-17 92.0 61 68.9
PSO541G3448 Papaver somniferum HOM05D006381 ORTHO05D008523 3.3e-17 92.0 107 48.6
AT2G42220 Arabidopsis thaliana HOM05D006381 ORTHO05D008523 4.3e-17 91.7 107 50.5
Rhsim03G0009200 Rhododendron simsii HOM05D006381 ORTHO05D008523 4.3e-17 91.7 107 50.5
CiPaw.10G028100 Carya illinoinensis HOM05D006381 ORTHO05D008523 5.6e-17 91.3 62 64.5
Medtr7g092820 Medicago truncatula HOM05D006381 ORTHO05D008523 7.3e-17 90.9 94 48.9
Psat3g069760 Pisum sativum HOM05D006381 ORTHO05D008523 1.2e-16 90.1 64 65.6
TPR.G13232 Trifolium pratense HOM05D004743 ORTHO05D005698 1.2e-16 90.1 96 51.0
Lalb_Chr18g0047731 Lupinus albus HOM05D006381 ORTHO05D008523 2.1e-16 89.4 102 51.0
ATR0800G100 Amborella trichopoda HOM05D006381 ORTHO05D008523 2.8e-16 89.0 64 62.5
Os09g0279400 Oryza sativa ssp. japonica HOM05D006381 ORTHO05D008523 2.8e-16 89.0 97 49.5
Ciclev10012632m.g Citrus clementina HOM05D006381 ORTHO05D008523 8.1e-16 87.4 111 48.6
SEGI_13099 Sequoiadendron giganteum HOM05D006381 ORTHO05D008523 8.1e-16 87.4 58 60.3
SEGI_24484 Sequoiadendron giganteum HOM05D006381 ORTHO05D008523 8.1e-16 87.4 58 60.3
arahy.Tifrunner.gnm1.ann1.F0FEHE Arachis hypogaea HOM05D000477 ORTHO05D000338 1.1e-15 87.0 53 69.8
Glyma.19G145800 Glycine max HOM05D006381 ORTHO05D008523 1.1e-15 87.0 93 48.4
vmacro07936 Vaccinium macrocarpon HOM05D006381 ORTHO05D008523 1.1e-15 87.0 69 58.0
Glyma.03G142800 Glycine max HOM05D006381 ORTHO05D008523 1.4e-15 86.7 106 45.3
Ah.04g152280 Amaranthus hybridus HOM05D006381 ORTHO05D008523 4.0e-15 85.1 99 46.5
DCAR_019795 Daucus carota HOM05D006381 ORTHO05D008523 4.0e-15 85.1 68 58.8
Zm00001eb308430 Zea mays HOM05D006381 ORTHO05D008523 4.0e-15 85.1 60 61.7
Mapoly0036s0007 Marchantia polymorpha HOM05D006381 ORTHO05D008523 1.5e-14 83.2 85 47.1
CDE07G0110 Ceratophyllum demersum HOM05D006381 ORTHO05D008523 5.8e-14 81.3 62 62.9
Sc13g0002120 Simmondsia chinensis HOM05D006381 ORTHO05D008523 2.9e-13 79.0 67 50.7
HPP92_003001 Vanilla planifolia HOM05D006381 ORTHO05D008523 6.4e-13 77.8 86 45.3
SMO140G0099 Selaginella moellendorffii HOM05D006381 ORTHO05D008523 9.2e-12 73.9 57 57.9
Pp3c10_12080 Physcomitrium patens HOM05D006381 ORTHO05D008523 7.8e-11 70.9 91 40.7
CBR_g12715 Chara braunii HOM05D006381 ORTHO05D008523 3.9e-10 68.6 52 55.8
AagrBONN_evm.TU.Sc2ySwM_344.4001 Anthoceros agrestis HOM05D006381 ORTHO05D008523 5.6e-09 64.7 80 40.0
A05p39930 Brassica napus HOM05D002957 ORTHO05D009332 6.8e-07 57.8 54 48.1
Aa31LG5G18880 Aethionema arabicum HOM05D002957 ORTHO05D009332 1.5e-06 56.6 57 47.4
BraSC256t45931Z Brassica rapa HOM05D002957 ORTHO05D009332 2.0e-06 56.2 54 46.3
BcaC05g29625 Brassica carinata HOM05D002957 ORTHO05D009332 2.6e-06 55.8 54 46.3
C05p58970 Brassica napus HOM05D002957 ORTHO05D009332 2.6e-06 55.8 54 46.3
Thhalv10021504m.g Eutrema salsugineum HOM05D002957 ORTHO05D009332 2.6e-06 55.8 57 45.6
Sp3g07310 Schrenkiella parvula HOM05D002957 ORTHO05D009332 2.6e-06 55.8 57 45.6


User provided reference genes

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