Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G3428 Salvia bowleyana HOM05D006176 ORTHO05D007346 1.3e-24 115.5 56 100.0
Migut.I01087 Erythranthe guttata HOM05D006176 ORTHO05D007346 4.9e-16 87.0 50 80.0
SGA_v2.0_scaffold122G33347 Striga asiatica HOM05D006176 ORTHO05D007346 3.5e-14 80.9 53 69.8
Nitab4.5_0000255g0320 Nicotiana tabacum HOM05D006176 ORTHO05D007346 3.0e-13 77.8 50 66.0
Oeu043644.1 Olea europaea HOM05D006176 ORTHO05D007346 5.0e-13 77.0 50 64.0
Nitab4.5_0010678g0020 Nicotiana tabacum HOM05D006176 ORTHO05D007346 6.6e-13 76.6 50 64.0
Solyc06g062930.1 Solanum lycopersicum HOM05D006176 ORTHO05D007346 8.6e-13 76.3 50 64.0
Sopen06g022380 Solanum pennellii HOM05D006176 ORTHO05D007346 8.6e-13 76.3 50 64.0
PGSC0003DMG400004890 Solanum tuberosum HOM05D006176 ORTHO05D007346 1.5e-12 75.5 50 62.0
Ah.08g216920 Amaranthus hybridus HOM05D006176 ORTHO05D007346 2.5e-12 74.7 50 62.0
DCAR_022691 Daucus carota HOM05D006176 ORTHO05D007346 9.5e-12 72.8 49 59.2
Lsat_1_v5_gn_4_94161 Lactuca sativa HOM05D006176 ORTHO05D007346 1.2e-11 72.4 47 68.1
Cfa003523 Carpinus fangiana HOM05D006176 ORTHO05D007346 3.6e-11 70.9 52 53.8
Haze_16045 Corylus avellana HOM05D006176 ORTHO05D007346 4.7e-11 70.5 52 53.8
Actinidia26022 Actinidia chinensis HOM05D006176 ORTHO05D007346 8.0e-11 69.7 48 60.4
Dinv20423 Davidia involucrata HOM05D006176 ORTHO05D007346 1.1e-10 69.3 58 62.1
Gohir.A05G139800 Gossypium hirsutum HOM05D006176 ORTHO05D007346 1.8e-10 68.6 50 54.0
Gohir.D05G142000 Gossypium hirsutum HOM05D006176 ORTHO05D007346 1.8e-10 68.6 50 54.0
Gorai.009G146100 Gossypium raimondii HOM05D006176 ORTHO05D007346 1.8e-10 68.6 50 54.0
Thecc.06G122200 Theobroma cacao HOM05D006176 ORTHO05D007346 2.3e-10 68.2 50 50.0
Manes.04G145900 Manihot esculenta HOM05D006176 ORTHO05D007346 4.0e-10 67.4 50 52.0
TWI75G0921 Tripterygium wilfordii HOM05D006176 ORTHO05D007346 4.0e-10 67.4 50 54.0
Atru.chr1.4004 Acer truncatum HOM05D006176 ORTHO05D007346 5.2e-10 67.0 50 56.0
Atru.chr1.4021 Acer truncatum HOM05D006176 ORTHO05D007346 5.2e-10 67.0 50 56.0
Migut.D00934 Erythranthe guttata HOM05D006176 ORTHO05D007346 1.2e-09 65.9 56 55.4
Gohir.A10G054700 Gossypium hirsutum HOM05D006176 ORTHO05D007346 1.2e-09 65.9 52 48.1
Gohir.D10G056700 Gossypium hirsutum HOM05D006176 ORTHO05D007346 1.2e-09 65.9 52 48.1
CiPaw.01G217500 Carya illinoinensis HOM05D006176 ORTHO05D007346 1.5e-09 65.5 48 52.1
Gorai.011G060500 Gossypium raimondii HOM05D006176 ORTHO05D007346 1.5e-09 65.5 50 50.0
Duzib192G0929 Durio zibethinus HOM05D006176 ORTHO05D007346 2.6e-09 64.7 51 47.1
Oeu000400.1 Olea europaea HOM05D006176 ORTHO05D007346 2.6e-09 64.7 50 58.0
COL.COLO4_30741 Corchorus olitorius HOM05D006176 ORTHO05D007346 4.4e-09 63.9 52 46.2
FvH4_6g34980 Fragaria vesca HOM05D006176 ORTHO05D007346 4.4e-09 63.9 50 56.0
FAN05G0172 Fragaria x ananassa HOM05D006176 ORTHO05D007346 4.4e-09 63.9 50 56.0
FAN09G3283 Fragaria x ananassa HOM05D006176 ORTHO05D007346 4.4e-09 63.9 50 56.0
FAN14G1476 Fragaria x ananassa HOM05D006176 ORTHO05D007346 4.4e-09 63.9 50 56.0
Dinv37860 Davidia involucrata HOM05D006176 ORTHO05D007346 5.8e-09 63.5 42 69.0
Lalb_Chr04g0261121 Lupinus albus HOM05D006176 ORTHO05D007346 7.5e-09 63.2 51 52.9
vmacro22033 Vaccinium macrocarpon HOM05D006176 ORTHO05D007346 9.8e-09 62.8 48 54.2
EL10Ac7g16423 Beta vulgaris HOM05D006176 ORTHO05D007346 1.3e-08 62.4 48 50.0
Lj3g0022886 Lotus japonicus HOM05D006176 ORTHO05D007346 1.7e-08 62.0 50 50.0
Aqoxy2G03952 Aquilegia oxysepala HOM05D006176 ORTHO05D007346 4.9e-08 60.5 50 50.0
ClCG07G014560 Citrullus lanatus HOM05D006176 ORTHO05D007346 4.9e-08 60.5 52 51.9
Ca_23393_v3 Cicer arietinum L. HOM05D006176 ORTHO05D007346 8.3e-08 59.7 50 48.0
Glyma.16G008800 Glycine max HOM05D006176 ORTHO05D007346 8.3e-08 59.7 50 46.0
RcHm_v2.0_Chr2g0146001 Rosa chinensis HOM05D006176 ORTHO05D007346 1.1e-07 59.3 50 50.0
CsaV3_3G030710 Cucumis sativus L. HOM05D006176 ORTHO05D007346 1.4e-07 58.9 52 48.1
Rhsim12G0210400 Rhododendron simsii HOM05D006176 ORTHO05D007346 1.4e-07 58.9 47 51.1
Rhsim12G0210800 Rhododendron simsii HOM05D006176 ORTHO05D007346 1.4e-07 58.9 47 51.1
Glyma.07G040000 Glycine max HOM05D006176 ORTHO05D007346 1.9e-07 58.5 50 46.0
Medtr8g021025 Medicago truncatula HOM05D006176 ORTHO05D007346 2.4e-07 58.2 50 46.0
TPR.G16753 Trifolium pratense HOM05D006176 ORTHO05D007346 2.4e-07 58.2 50 46.0
MELO3C022667.2 Cucumis melo HOM05D006176 ORTHO05D007346 3.2e-07 57.8 52 48.1
Potri.003G067200 Populus trichocarpa HOM05D006176 ORTHO05D007346 3.2e-07 57.8 50 50.0
Phvul.010G128700 Phaseolus vulgaris HOM05D006176 ORTHO05D007346 4.1e-07 57.4 50 44.0
Prupe.3G039100 Prunus persica HOM05D006176 ORTHO05D007346 4.1e-07 57.4 50 48.0
CANSAT56G3952 Cannabis sativa HOM05D006176 ORTHO05D007346 5.4e-07 57.0 48 41.7
MD09G1180800 Malus domestica HOM05D006176 ORTHO05D007346 5.4e-07 57.0 50 48.0
Nn8g38624 Nelumbo nucifera HOM05D006176 ORTHO05D007346 5.4e-07 57.0 51 45.1
Potri.001G167600 Populus trichocarpa HOM05D006176 ORTHO05D007346 5.4e-07 57.0 50 48.0
MD17G1166900 Malus domestica HOM05D006176 ORTHO05D007346 7.0e-07 56.6 50 44.0
Psat4g168640 Pisum sativum HOM05D006176 ORTHO05D007346 1.6e-06 55.5 50 42.0
Sed0000884 Sechium edule HOM05D006176 ORTHO05D007346 1.6e-06 55.5 45 46.7
PGSC0003DMG400004373 Solanum tuberosum HOM05D006176 ORTHO05D007346 1.6e-06 55.5 42 54.8
HanXRQChr12g0360401 Helianthus annuus HOM05D006176 ORTHO05D007346 2.1e-06 55.1 48 50.0
MBI13_g35417_MAGBIO Magnolia biondii HOM05D006176 ORTHO05D007346 2.1e-06 55.1 50 44.0
SGA_v2.0_scaffold4G02067 Striga asiatica HOM05D006176 ORTHO05D007346 2.1e-06 55.1 42 54.8
Ciclev10027265m.g Citrus clementina HOM05D006176 ORTHO05D007346 2.7e-06 54.7 40 57.5
PGR102G2654 Punica granatum HOM05D006176 ORTHO05D007346 2.7e-06 54.7 54 42.6
Peaxi162Scf00038g02015 Petunia axillaris HOM05D006176 ORTHO05D007346 3.5e-06 54.3 41 53.7
Lsat_1_v5_gn_5_136361 Lactuca sativa HOM05D006176 ORTHO05D007346 4.6e-06 53.9 48 50.0
Cpa.g.c40357 Carica papaya HOM05D006176 ORTHO05D007346 6.0e-06 53.5 47 51.1
Sopen03g041090 Solanum pennellii HOM05D006176 ORTHO05D007346 6.0e-06 53.5 50 42.0
Sed0005659 Sechium edule HOM05D006176 ORTHO05D007346 7.8e-06 53.1 48 50.0
PGSC0003DMG400004372 Solanum tuberosum HOM05D064183 ORTHO05D051167 7.8e-06 53.1 52 42.3


User provided reference genes

Program Settings