Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 5.1e-102 374.4 188 100.0
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 7.9e-87 323.9 188 84.6
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 7.7e-82 307.4 186 78.0
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 7.0e-75 284.3 189 75.1
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.6e-74 283.1 188 73.4
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 3.5e-74 282.0 201 71.1
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 4.5e-74 281.6 188 72.9
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 7.7e-74 280.8 194 73.2
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 7.7e-74 280.8 197 70.6
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 7.7e-74 280.8 187 71.7
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 1.0e-73 280.4 186 74.7
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 1.0e-73 280.4 191 73.8
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 1.7e-73 279.6 186 74.7
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 2.9e-73 278.9 184 72.8
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 5.0e-73 278.1 191 74.9
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 5.0e-73 278.1 186 74.2
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 5.0e-73 278.1 197 70.6
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 6.5e-73 277.7 188 71.8
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 8.5e-73 277.3 188 70.7
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 8.5e-73 277.3 191 74.9
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 1.5e-72 276.6 199 70.4
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 3.2e-72 275.4 193 72.0
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 4.2e-72 275.0 194 70.1
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 5.5e-72 274.6 188 69.7
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 1.6e-71 273.1 188 71.3
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 2.7e-71 272.3 188 70.7
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 2.7e-71 272.3 188 70.2
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 3.6e-71 271.9 186 69.9
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 4.7e-71 271.6 187 71.7
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 6.1e-71 271.2 188 68.1
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 1.0e-70 270.4 189 69.3
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 1.0e-70 270.4 188 68.6
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 1.0e-70 270.4 186 70.4
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 1.4e-70 270.0 188 69.7
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 1.4e-70 270.0 186 70.4
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 1.8e-70 269.6 190 68.4
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 1.8e-70 269.6 183 69.9
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 2.3e-70 269.2 186 68.8
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 5.2e-70 268.1 186 67.7
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 5.2e-70 268.1 188 70.2
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 6.8e-70 267.7 188 70.2
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 6.8e-70 267.7 194 68.6
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 1.2e-69 266.9 195 68.2
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 1.5e-69 266.5 186 67.2
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 1.5e-69 266.5 186 67.2
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 1.5e-69 266.5 186 67.2
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 1.5e-69 266.5 188 69.7
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 1.5e-69 266.5 184 71.2
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 1.5e-69 266.5 182 69.2
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 2.6e-69 265.8 193 66.3
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 2.6e-69 265.8 192 66.7
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 3.4e-69 265.4 186 69.9
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 4.4e-69 265.0 188 69.1
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 4.4e-69 265.0 190 67.9
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 7.5e-69 264.2 181 68.5
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 9.8e-69 263.8 188 69.1
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 9.8e-69 263.8 186 67.2
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.7e-68 263.1 191 70.2
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.7e-68 263.1 191 70.2
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 2.2e-68 262.7 188 64.9
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 2.2e-68 262.7 188 66.0
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 2.2e-68 262.7 188 66.0
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 2.2e-68 262.7 192 66.1
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 2.2e-68 262.7 186 69.9
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 2.8e-68 262.3 188 68.6
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 3.7e-68 261.9 188 67.0
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 8.3e-68 260.8 197 65.5
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 5.4e-67 258.1 197 63.5
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 7.0e-67 257.7 189 67.2
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 9.1e-67 257.3 185 67.0
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 2.7e-66 255.8 181 66.9
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 3.5e-66 255.4 185 66.5
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 3.5e-66 255.4 185 66.5
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 4.5e-66 255.0 186 65.6
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 4.5e-66 255.0 185 66.5
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 2.3e-65 252.7 186 66.7
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 6.5e-65 251.1 215 63.7
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 8.6e-65 250.8 201 67.2
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 3.2e-64 248.8 188 66.5
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 7.2e-64 247.7 186 65.1
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 1.2e-63 246.9 177 70.1
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 2.1e-63 246.1 187 63.1
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 4.0e-62 241.9 181 64.6
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 5.2e-62 241.5 189 62.4
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.5e-61 240.0 185 63.8
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 2.6e-61 239.2 180 61.1
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 3.7e-60 235.3 190 61.1
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 1.6e-58 229.9 154 74.7
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 7.8e-58 227.6 155 72.3
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 1.7e-57 226.5 260 49.6
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 2.9e-57 225.7 134 78.4
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 5.0e-57 224.9 153 73.9
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 3.0e-54 215.7 188 60.1
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 1.5e-53 213.4 182 57.1
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 4.4e-53 211.8 157 69.4
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 1.7e-52 209.9 155 69.0
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 3.7e-52 208.8 183 55.7
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 8.3e-52 207.6 172 62.2
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 1.1e-51 207.2 186 54.3
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 3.3e-48 195.7 158 61.4
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 1.2e-47 193.7 188 55.3
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 4.7e-47 191.8 153 64.1
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 1.5e-45 186.8 170 58.2
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 2.6e-45 186.0 189 52.9
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 1.7e-44 183.3 149 60.4
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 1.6e-42 176.8 138 60.1
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 5.0e-41 171.8 190 50.0
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 9.9e-37 157.5 188 46.3
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 9.2e-35 151.0 132 60.6
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 1.2e-34 150.6 182 46.7
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 2.4e-30 136.3 182 44.0
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 5.2e-30 135.2 185 44.3
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 8.4e-28 127.9 78 75.6
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 1.6e-18 97.1 56 75.0


User provided reference genes

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