Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0200 Salvia bowleyana HOM05D001557 ORTHO05D001299 1.6e-45 185.7 91 100.0
SalBow6G6552 Salvia bowleyana HOM05D001557 ORTHO05D001299 2.7e-24 115.2 59 94.9
SalBow8G0091 Salvia bowleyana HOM05D001557 ORTHO05D001299 6.1e-16 87.4 62 72.6
GSVIVG01010499001 Vitis vinifera HOM05D001557 ORTHO05D001299 2.8e-13 78.6 61 63.9
SalBow2G0883 Salvia bowleyana HOM05D001557 ORTHO05D001299 8.2e-13 77.0 63 60.3
SGA_v2.0_scaffold63G21642 Striga asiatica HOM05D001557 ORTHO05D001299 1.1e-12 76.6 60 63.3
MSTRG.712 Avicennia marina HOM05D001557 ORTHO05D001299 1.4e-12 76.3 63 61.9
PGSC0003DMG400018430 Solanum tuberosum HOM05D001557 ORTHO05D001299 1.8e-12 75.9 57 63.2
PGSC0003DMG400018453 Solanum tuberosum HOM05D001557 ORTHO05D001299 1.8e-12 75.9 57 63.2
Migut.L01276 Erythranthe guttata HOM05D001557 ORTHO05D001299 3.1e-12 75.1 59 64.4
Solyc05g007840.3 Solanum lycopersicum HOM05D001557 ORTHO05D001299 3.1e-12 75.1 58 63.8
Nitab4.5_0004623g0020 Nicotiana tabacum HOM05D001557 ORTHO05D001299 4.1e-12 74.7 57 61.4
EL10Ac5g12437 Beta vulgaris HOM05D001557 ORTHO05D001299 5.3e-12 74.3 54 66.7
unitig_21.g20420 Utricularia gibba HOM05D001557 ORTHO05D001299 9.1e-12 73.6 63 57.1
CSS0022504 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 1.2e-11 73.2 57 59.6
CSS0033825 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 1.2e-11 73.2 57 59.6
CSS0035188 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 1.2e-11 73.2 57 59.6
Cc06_g19140 Coffea canephora HOM05D001557 ORTHO05D001299 1.5e-11 72.8 63 55.6
Sopen05g003700 Solanum pennellii HOM05D001557 ORTHO05D001299 1.5e-11 72.8 51 68.6
Migut.E00082 Erythranthe guttata HOM05D001557 ORTHO05D001299 2.0e-11 72.4 57 63.2
Nitab4.5_0000040g0140 Nicotiana tabacum HOM05D001557 ORTHO05D001299 2.0e-11 72.4 57 59.6
Prupe.1G276500 Prunus persica HOM05D001557 ORTHO05D001299 2.6e-11 72.0 51 68.6
PSO013G0284 Papaver somniferum HOM05D001557 ORTHO05D001299 4.5e-11 71.2 51 64.7
CSS0012568 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 5.9e-11 70.9 57 57.9
CSS0039687 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 5.9e-11 70.9 57 57.9
CAN.G1580.1 Capsicum annuum HOM05D001557 ORTHO05D001299 5.9e-11 70.9 57 59.6
Eucgr.G02491 Eucalyptus grandis HOM05D001557 ORTHO05D001299 5.9e-11 70.9 57 61.4
Sc04g0008000 Simmondsia chinensis HOM05D001557 ORTHO05D001299 5.9e-11 70.9 65 56.9
THA.LOC104801801 Tarenaya hassleriana HOM05D001557 ORTHO05D001299 5.9e-11 70.9 57 64.9
Cpa.g.sc1.44 Carica papaya HOM05D001557 ORTHO05D001299 7.7e-11 70.5 51 66.7
MD09G1014700 Malus domestica HOM05D001557 ORTHO05D001299 7.7e-11 70.5 51 66.7
MD16G1071200 Malus domestica HOM05D001557 ORTHO05D001299 7.7e-11 70.5 51 66.7
Thecc.02G344000 Theobroma cacao HOM05D001557 ORTHO05D001299 7.7e-11 70.5 63 55.6
CSS0019472 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 1.0e-10 70.1 56 58.9
CiPaw.06G086600 Carya illinoinensis HOM05D001557 ORTHO05D001299 1.0e-10 70.1 57 59.6
QL03p068643 Quercus lobata HOM05D001557 ORTHO05D001299 1.0e-10 70.1 51 64.7
Actinidia12293 Actinidia chinensis HOM05D001557 ORTHO05D001299 1.3e-10 69.7 57 57.9
AUR62007047 Chenopodium quinoa HOM05D001557 ORTHO05D001299 1.3e-10 69.7 58 58.6
AUR62019911 Chenopodium quinoa HOM05D001557 ORTHO05D001299 1.3e-10 69.7 58 58.6
SGA_v2.0_scaffold172G38963 Striga asiatica HOM05D001557 ORTHO05D001299 1.3e-10 69.7 63 54.0
BcaC06g31205 Brassica carinata HOM05D001557 ORTHO05D001299 1.7e-10 69.3 60 58.3
BcaC06g34023 Brassica carinata HOM05D001557 ORTHO05D001299 1.7e-10 69.3 60 58.3
C07p33620 Brassica napus HOM05D001557 ORTHO05D001299 1.7e-10 69.3 60 58.3
BraA06t27219Z Brassica rapa HOM05D001557 ORTHO05D001299 1.7e-10 69.3 60 58.3
AL5G12630 Arabidopsis lyrata HOM05D001557 ORTHO05D001299 2.2e-10 68.9 60 60.0
AT2G03050 Arabidopsis thaliana HOM05D001557 ORTHO05D001299 2.2e-10 68.9 60 60.0
Cfa008965 Carpinus fangiana HOM05D001557 ORTHO05D001299 2.2e-10 68.9 51 64.7
Haze_11996 Corylus avellana HOM05D001557 ORTHO05D001299 2.2e-10 68.9 51 64.7
TWI31G0045 Tripterygium wilfordii HOM05D001557 ORTHO05D001299 2.9e-10 68.6 57 59.6
FvH4_4g31180 Fragaria vesca HOM05D001557 ORTHO05D001299 3.8e-10 68.2 54 61.1
FAN07G1395 Fragaria x ananassa HOM05D001557 ORTHO05D001299 3.8e-10 68.2 54 61.1
FAN17G1523 Fragaria x ananassa HOM05D001557 ORTHO05D001299 3.8e-10 68.2 54 61.1
Oeu055110.1 Olea europaea HOM05D001557 ORTHO05D001299 3.8e-10 68.2 63 50.8
Peaxi162Scf00222g00059 Petunia axillaris HOM05D001557 ORTHO05D001299 3.8e-10 68.2 51 62.7
Dinv16661 Davidia involucrata HOM05D001557 ORTHO05D001299 5.0e-10 67.8 51 64.7
Thhalv10004730m.g Eutrema salsugineum HOM05D001557 ORTHO05D001299 6.5e-10 67.4 60 58.3
CSS0040837 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 8.5e-10 67.0 57 56.1
Sp2g14050 Schrenkiella parvula HOM05D001557 ORTHO05D001299 8.5e-10 67.0 60 58.3
Sed0014117 Sechium edule HOM05D001557 ORTHO05D001299 8.5e-10 67.0 51 60.8
Aa31LG2G7340 Aethionema arabicum HOM05D001557 ORTHO05D001299 1.1e-09 66.6 55 61.8
Carub.0005s0190 Capsella rubella HOM05D001557 ORTHO05D001299 1.1e-09 66.6 54 63.0
CDE08G0018 Ceratophyllum demersum HOM05D001557 ORTHO05D001299 1.1e-09 66.6 70 47.1
PGR119G1320 Punica granatum HOM05D001557 ORTHO05D001299 1.1e-09 66.6 53 60.4
CARHR145420 Cardamine hirsuta HOM05D001557 ORTHO05D001299 1.4e-09 66.2 54 63.0
Rhsim05G0186700 Rhododendron simsii HOM05D001557 ORTHO05D001299 1.4e-09 66.2 76 44.7
RcHm_v2.0_Chr4g0439561 Rosa chinensis HOM05D001557 ORTHO05D001299 1.4e-09 66.2 54 59.3
PSO832G2716 Papaver somniferum HOM05D001557 ORTHO05D001299 1.9e-09 65.9 51 60.8
Duzib251G0578 Durio zibethinus HOM05D001557 ORTHO05D001299 2.5e-09 65.5 57 56.1
FAN12G3044 Fragaria x ananassa HOM05D001557 ORTHO05D001299 2.5e-09 65.5 54 59.3
Potri.010G167400 Populus trichocarpa HOM05D001557 ORTHO05D001299 2.5e-09 65.5 56 53.6
vmacro20110 Vaccinium macrocarpon HOM05D001557 ORTHO05D001299 2.5e-09 65.5 56 51.8
ATR0730G079 Amborella trichopoda HOM05D001557 ORTHO05D001299 3.2e-09 65.1 57 56.1
Manes.01G034700 Manihot esculenta HOM05D001557 ORTHO05D001299 3.2e-09 65.1 57 54.4
CSS0023774 Camellia sinensis var. sinensis HOM05D001557 ORTHO05D001299 4.2e-09 64.7 45 66.7
Ciclev10032299m.g Citrus clementina HOM05D001557 ORTHO05D001299 5.5e-09 64.3 55 52.7
Cc11_g12840 Coffea canephora HOM05D001557 ORTHO05D001299 5.5e-09 64.3 63 47.6
TAR371G0335 Trochodendron aralioides HOM05D001557 ORTHO05D001299 5.5e-09 64.3 51 58.8
Gohir.D06G218600 Gossypium hirsutum HOM05D001557 ORTHO05D001299 7.2e-09 63.9 57 54.4
Gorai.010G247700 Gossypium raimondii HOM05D001557 ORTHO05D001299 7.2e-09 63.9 57 54.4
TAR629G2603 Trochodendron aralioides HOM05D001557 ORTHO05D001299 9.4e-09 63.5 57 54.4
Potri.008G088100 Populus trichocarpa HOM05D001557 ORTHO05D001299 1.2e-08 63.2 63 47.6
Nn4g23205 Nelumbo nucifera HOM05D001557 ORTHO05D001299 2.1e-08 62.4 51 58.8
DCAR_027422 Daucus carota HOM05D001557 ORTHO05D001299 2.7e-08 62.0 51 58.8
Atru.chr11.1766 Acer truncatum HOM05D001557 ORTHO05D001299 3.6e-08 61.6 61 50.8
DCAR_031007 Daucus carota HOM05D001557 ORTHO05D001299 3.6e-08 61.6 57 54.4
Gohir.A06G203100 Gossypium hirsutum HOM05D001557 ORTHO05D001299 3.6e-08 61.6 57 52.6
COL.COLO4_22949 Corchorus olitorius HOM05D001557 ORTHO05D001299 4.7e-08 61.2 54 53.7
CDE06G2314 Ceratophyllum demersum HOM05D001557 ORTHO05D001299 7.9e-08 60.5 51 56.9
ECA246G3210 Erigeron canadensis HOM05D001557 ORTHO05D001299 1.8e-07 59.3 57 52.6
Lsat_1_v5_gn_3_54060 Lactuca sativa HOM05D001557 ORTHO05D001299 1.8e-07 59.3 57 50.9
Sabra10G0127200 Salix brachista HOM05D001557 ORTHO05D001299 1.8e-07 59.3 56 48.2
MELO3C012106.2 Cucumis melo HOM05D001557 ORTHO05D001299 2.3e-07 58.9 50 56.0
HanXRQChr01g0013231 Helianthus annuus HOM05D001557 ORTHO05D001299 3.0e-07 58.5 51 56.9
Lj1g0013225 Lotus japonicus HOM05D001557 ORTHO05D001299 3.0e-07 58.5 51 54.9
CsaV3_5G032850 Cucumis sativus L. HOM05D001557 ORTHO05D001299 5.1e-07 57.8 50 56.0
CAN.G1580.2 Capsicum annuum HOM05D001557 ORTHO05D001299 1.5e-06 56.2 51 54.9
VMungo1215G1785 Vigna mungo HOM05D001557 ORTHO05D001299 2.0e-06 55.8 50 56.0
Glyma.01G049900 Glycine max HOM05D001557 ORTHO05D001299 3.3e-06 55.1 48 56.2
Glyma.02G108900 Glycine max HOM05D001557 ORTHO05D001299 4.4e-06 54.7 50 54.0
Lalb_Chr17g0340801 Lupinus albus HOM05D001557 ORTHO05D001299 7.4e-06 53.9 51 52.9


User provided reference genes

Program Settings