Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 2.6e-177 625.2 295 100.0
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 2.1e-102 376.3 306 67.0
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 1.7e-96 356.7 291 60.5
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 1.4e-90 337.0 290 59.0
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 1.4e-90 337.0 284 59.9
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 6.2e-86 321.6 244 63.5
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 4.0e-85 318.9 254 60.2
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 2.6e-84 316.2 250 61.6
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 7.6e-84 314.7 269 56.9
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 7.6e-84 314.7 262 59.2
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 9.9e-84 314.3 294 54.8
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 9.9e-84 314.3 270 56.7
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.2e-83 313.2 250 59.6
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.4e-82 310.5 239 61.5
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.4e-82 310.5 239 61.5
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.4e-82 310.5 262 58.4
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 2.4e-82 309.7 286 53.5
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 2.4e-82 309.7 248 59.3
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 3.2e-82 309.3 273 56.4
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 4.2e-82 308.9 265 57.4
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 9.2e-82 307.8 271 57.9
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 9.2e-82 307.8 272 54.8
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 9.2e-82 307.8 281 54.8
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 2.7e-81 306.2 262 56.1
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 2.7e-81 306.2 278 55.8
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 3.5e-81 305.8 264 56.4
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 4.6e-81 305.4 280 56.1
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 6.0e-81 305.1 230 61.3
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 1.0e-80 304.3 245 58.4
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 1.0e-80 304.3 253 54.5
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 1.0e-80 304.3 250 58.8
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 1.7e-80 303.5 237 62.9
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 1.7e-80 303.5 273 54.6
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 1.7e-80 303.5 264 55.3
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 1.7e-80 303.5 247 59.1
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 3.0e-80 302.8 263 55.9
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 5.1e-80 302.0 273 57.1
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 6.6e-80 301.6 263 57.8
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 6.6e-80 301.6 264 54.9
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 6.6e-80 301.6 269 53.5
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 8.7e-80 301.2 250 55.6
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 8.7e-80 301.2 276 53.3
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 8.7e-80 301.2 288 52.8
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 1.5e-79 300.4 255 56.5
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 2.5e-79 299.7 280 52.9
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 3.3e-79 299.3 252 56.7
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 5.6e-79 298.5 242 57.9
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 9.6e-79 297.7 235 58.7
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 9.6e-79 297.7 264 54.9
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 2.8e-78 296.2 234 57.3
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 3.6e-78 295.8 251 55.8
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 4.7e-78 295.4 255 56.9
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 8.1e-78 294.7 268 55.6
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 8.1e-78 294.7 256 58.2
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.1e-77 294.3 271 53.9
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 1.1e-77 294.3 246 56.1
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 2.4e-77 293.1 280 52.5
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 1.5e-76 290.4 246 56.5
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 5.8e-76 288.5 253 54.5
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 1.3e-75 287.3 229 58.5
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 1.3e-75 287.3 252 54.4
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 2.9e-75 286.2 229 58.1
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 2.9e-75 286.2 252 54.0
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 3.8e-75 285.8 254 57.1
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 4.9e-75 285.4 255 52.9
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 6.4e-75 285.0 236 57.6
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 6.4e-75 285.0 246 54.5
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 8.4e-75 284.6 252 53.6
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 1.9e-74 283.5 230 57.4
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 3.2e-74 282.7 239 55.6
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 1.2e-73 280.8 230 57.0
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 2.7e-73 279.6 243 55.1
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 3.5e-73 279.3 277 50.2
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 1.0e-72 277.7 234 56.4
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 2.3e-72 276.6 275 49.8
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 2.3e-72 276.6 230 57.0
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 1.1e-71 274.2 241 53.9
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 4.3e-71 272.3 209 61.2
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 5.3e-69 265.4 215 58.1
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 9.0e-69 264.6 255 51.4
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 1.0e-64 251.1 197 58.4
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 1.8e-64 250.4 211 57.3
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 2.3e-64 250.0 215 54.4
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 3.0e-64 249.6 215 54.0
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 4.3e-63 245.7 248 49.2
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 7.4e-63 245.0 262 49.6
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 3.4e-60 236.1 202 55.4
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 5.8e-60 235.3 241 48.5
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 3.8e-59 232.6 238 47.1
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 7.1e-58 228.4 227 48.0
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 1.6e-57 227.3 202 58.4
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.1e-57 226.9 209 56.0
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 1.9e-55 220.3 278 42.1
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 4.3e-55 219.2 206 53.9
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 4.3e-55 219.2 169 60.9
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 2.6e-52 209.9 225 50.7
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 4.5e-44 182.6 171 53.8
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 7.2e-42 175.3 119 64.7
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 9.4e-42 174.9 240 40.4
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 1.4e-40 171.0 104 69.2
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 2.2e-38 163.7 268 37.7
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.4e-37 161.0 234 42.3
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 2.2e-35 153.7 146 49.3
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 1.9e-34 150.6 230 37.0
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 7.7e-28 128.6 89 61.8
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 1.2e-25 121.3 87 63.2
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 6.1e-25 119.0 116 51.7
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 1.2e-20 104.8 55 85.5
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 3.2e-18 96.7 70 57.1
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 1.0e-16 91.7 68 60.3
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 1.5e-15 87.8 67 58.2
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 2.0e-15 87.4 56 67.9
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 8.3e-14 82.0 96 46.9
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 7.7e-12 75.5 54 55.6
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 7.2e-10 68.9 93 40.9
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 7.2e-10 68.9 93 40.9
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 7.2e-10 68.9 93 40.9
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 7.2e-10 68.9 93 40.9
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 2.1e-09 67.4 92 40.2
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 4.0e-08 63.2 72 40.3


User provided reference genes

Program Settings