Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 3.9e-51 205.3 177 100.0
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 1.3e-22 110.5 183 42.6
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 6.5e-22 108.2 178 41.0
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 1.6e-20 103.6 177 40.7
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 3.3e-18 95.9 165 40.0
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 2.8e-17 92.8 165 38.2
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 6.2e-17 91.7 185 36.8
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 8.2e-17 91.3 162 36.4
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 1.1e-16 90.9 177 49.7
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 1.4e-16 90.5 182 44.5
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 4.1e-16 89.0 171 35.7
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 6.9e-16 88.2 162 38.9
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 4.5e-15 85.5 167 37.1
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 5.8e-15 85.1 167 37.1
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 7.6e-15 84.7 194 33.5
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 7.6e-15 84.7 180 35.6
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 7.6e-15 84.7 180 35.6
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 7.6e-15 84.7 162 42.6
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 7.6e-15 84.7 175 41.1
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.0e-14 84.3 178 35.4
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 1.0e-14 84.3 176 34.1
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 1.3e-14 84.0 167 37.1
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 1.3e-14 84.0 176 34.7
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 1.7e-14 83.6 162 37.7
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.2e-14 83.2 178 35.4
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 2.9e-14 82.8 163 38.0
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 2.9e-14 82.8 172 34.3
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 3.8e-14 82.4 161 39.1
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 3.8e-14 82.4 177 35.6
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 5.0e-14 82.0 162 36.4
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 5.0e-14 82.0 166 41.0
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 5.0e-14 82.0 178 35.4
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 1.1e-13 80.9 162 37.0
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 1.9e-13 80.1 175 36.0
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 1.9e-13 80.1 172 34.3
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 1.9e-13 80.1 164 36.0
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 3.2e-13 79.3 170 34.7
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 7.2e-13 78.2 163 36.8
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 7.2e-13 78.2 163 36.8
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 7.2e-13 78.2 163 36.8
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 7.2e-13 78.2 163 36.8
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 7.2e-13 78.2 187 44.4
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 7.2e-13 78.2 172 37.8
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 9.3e-13 77.8 176 34.1
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 9.3e-13 77.8 165 35.8
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 9.3e-13 77.8 178 33.7
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 9.3e-13 77.8 180 41.7
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 1.6e-12 77.0 176 38.6
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 2.1e-12 76.6 177 33.3
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 2.1e-12 76.6 171 32.7
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 2.7e-12 76.3 167 37.7
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 2.7e-12 76.3 175 34.9
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 3.5e-12 75.9 167 34.7
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 4.6e-12 75.5 162 34.0
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 6.1e-12 75.1 162 36.4
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 6.1e-12 75.1 169 39.1
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 7.9e-12 74.7 164 34.1
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 7.9e-12 74.7 169 35.5
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 7.9e-12 74.7 178 51.1
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 2.3e-11 73.2 162 35.8
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 2.3e-11 73.2 175 33.1
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 2.3e-11 73.2 194 33.0
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 2.3e-11 73.2 182 33.0
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 5.1e-11 72.0 182 32.4
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 1.1e-10 70.9 163 35.6
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 1.1e-10 70.9 170 47.6
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 4.3e-10 68.9 171 49.1
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 4.3e-10 68.9 163 33.7
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 5.7e-10 68.6 174 39.1
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 5.7e-10 68.6 163 33.7
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 7.4e-10 68.2 178 38.8
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 2.8e-09 66.2 173 28.3
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 4.8e-09 65.5 162 32.1
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 6.3e-09 65.1 169 45.0
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 1.4e-08 63.9 134 34.3
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 1.8e-08 63.5 151 31.8
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 1.2e-07 60.8 117 39.3
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 2.0e-07 60.1 185 35.1
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 3.4e-07 59.3 73 45.2
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 4.5e-07 58.9 170 30.6
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 5.9e-07 58.5 165 32.7
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 3.8e-06 55.8 153 28.1
Dinv32421 Davidia involucrata HOM05D007580 ORTHO05D009620 6.5e-06 55.1 43 62.8
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 6.5e-06 55.1 73 47.9
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 8.5e-06 54.7 179 32.4


User provided reference genes

Program Settings