Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra16G0033900 Salix brachista HOM05D006173 ORTHO05D007685 7.2e-297 1023.1 496 100.0
Potri.016G030400 Populus trichocarpa HOM05D006173 ORTHO05D007685 6.9e-247 857.1 495 86.1
Manes.10G077600 Manihot esculenta HOM05D006173 ORTHO05D007685 4.1e-199 698.4 495 70.3
Haze_20298 Corylus avellana HOM05D006173 ORTHO05D007685 1.2e-198 696.8 495 69.1
Ciclev10011725m.g Citrus clementina HOM05D006173 ORTHO05D007685 3.5e-198 695.3 496 68.3
Cpa.g.sc33.197 Carica papaya HOM05D006173 ORTHO05D007685 3.6e-195 685.3 495 68.3
Cfa019941 Carpinus fangiana HOM05D006173 ORTHO05D007685 1.7e-192 676.4 496 67.3
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla HOM05D006173 ORTHO05D007685 2.7e-190 669.1 503 66.8
Thecc.05G131000 Theobroma cacao HOM05D006173 ORTHO05D007685 1.1e-188 663.7 496 66.7
Actinidia17973 Actinidia chinensis HOM05D006173 ORTHO05D007685 1.0e-186 657.1 495 65.1
Atru.chr1.1516 Acer truncatum HOM05D006173 ORTHO05D007685 1.8e-186 656.4 496 66.1
TWI74G0774 Tripterygium wilfordii HOM05D006173 ORTHO05D007685 2.3e-186 656.0 498 66.3
Gorai.007G351000 Gossypium raimondii HOM05D006173 ORTHO05D007685 5.7e-185 651.4 496 65.9
Lj1g0020171 Lotus japonicus HOM05D006173 ORTHO05D007685 9.8e-185 650.6 498 64.3
ClCG10G016510 Citrullus lanatus HOM05D006173 ORTHO05D007685 6.3e-184 647.9 504 64.7
Gohir.A11G305400 Gossypium hirsutum HOM05D006173 ORTHO05D007685 8.3e-184 647.5 496 65.5
Gohir.D11G320800 Gossypium hirsutum HOM05D006173 ORTHO05D007685 1.1e-183 647.1 496 65.3
Prupe.7G021600 Prunus persica HOM05D006173 ORTHO05D007685 4.1e-183 645.2 495 64.8
CiPaw.10G124100 Carya illinoinensis HOM05D006173 ORTHO05D007685 5.9e-182 641.3 497 64.6
A09p49770 Brassica napus HOM05D006173 ORTHO05D007685 3.8e-181 638.6 495 64.8
BolC8t50833H Brassica oleracea HOM05D006173 ORTHO05D007685 3.8e-181 638.6 495 64.6
BraA09t40430Z Brassica rapa HOM05D006173 ORTHO05D007685 3.8e-181 638.6 495 64.8
BcaC07g40109 Brassica carinata HOM05D006173 ORTHO05D007685 5.0e-181 638.3 496 64.5
C08p32150 Brassica napus HOM05D006173 ORTHO05D007685 8.6e-181 637.5 495 64.8
Dinv10196 Davidia involucrata HOM05D006173 ORTHO05D007685 4.3e-180 635.2 495 64.6
Glyma.19G125000 Glycine max HOM05D006173 ORTHO05D007685 4.3e-180 635.2 496 64.5
Aa31LG10G11760 Aethionema arabicum HOM05D006173 ORTHO05D007685 9.5e-180 634.0 531 61.0
Thhalv10005968m.g Eutrema salsugineum HOM05D006173 ORTHO05D007685 1.2e-179 633.6 497 65.0
Phvul.001G116600 Phaseolus vulgaris HOM05D006173 ORTHO05D007685 2.1e-179 632.9 496 63.5
Glyma.03G120400 Glycine max HOM05D006173 ORTHO05D007685 8.0e-179 630.9 496 63.3
Medtr7g088540 Medicago truncatula HOM05D006173 ORTHO05D007685 1.0e-178 630.6 499 61.3
PGR142G0634 Punica granatum HOM05D006173 ORTHO05D007685 1.8e-178 629.8 499 63.5
EL10Ac3g07343 Beta vulgaris HOM05D006173 ORTHO05D007685 5.7e-177 624.8 495 62.0
Duzib106G1718 Durio zibethinus HOM05D006173 ORTHO05D007685 5.7e-177 624.8 496 63.1
CsaV3_3G039830 Cucumis sativus L. HOM05D006173 ORTHO05D007685 9.8e-177 624.0 496 63.9
BcaC07g40002 Brassica carinata HOM05D006173 ORTHO05D007685 1.7e-176 623.2 495 63.6
FAN10G0117 Fragaria x ananassa HOM05D006173 ORTHO05D007685 6.4e-176 621.3 495 63.0
FAN01G1644 Fragaria x ananassa HOM05D006173 ORTHO05D007685 2.4e-175 619.4 552 58.7
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea HOM05D006173 ORTHO05D007685 3.2e-175 619.0 509 60.7
VMungo0331G1996 Vigna mungo HOM05D006173 ORTHO05D007685 4.1e-175 618.6 496 62.5
Eucgr.K01689 Eucalyptus grandis HOM05D006173 ORTHO05D007685 5.4e-175 618.2 502 60.0
Cc06_g22820 Coffea canephora HOM05D006173 ORTHO05D007685 4.6e-174 615.1 498 63.5
THA.LOC104814894 Tarenaya hassleriana HOM05D006173 ORTHO05D007685 3.0e-173 612.5 495 62.2
CARHR167050 Cardamine hirsuta HOM05D006173 ORTHO05D007685 1.5e-172 610.1 497 63.2
Carub.0005s2364 Capsella rubella HOM05D006173 ORTHO05D007685 1.9e-172 609.8 497 62.6
AT3G56900 Arabidopsis thaliana HOM05D006173 ORTHO05D007685 2.5e-172 609.4 497 63.0
PSO541G4485 Papaver somniferum HOM05D006173 ORTHO05D007685 4.3e-172 608.6 493 62.3
AL5G38300 Arabidopsis lyrata HOM05D006173 ORTHO05D007685 2.8e-171 605.9 497 62.8
Sed0007984 Sechium edule HOM05D006173 ORTHO05D007685 6.2e-171 604.7 496 62.3
MELO3C009724.2 Cucumis melo HOM05D006173 ORTHO05D007685 2.3e-170 602.8 496 62.1
MD12G1112000 Malus domestica HOM05D006173 ORTHO05D007685 3.1e-170 602.4 549 56.5
Sp5g05690 Schrenkiella parvula HOM05D006173 ORTHO05D007685 8.9e-170 600.9 497 62.6
PSO675G1003 Papaver somniferum HOM05D006173 ORTHO05D007685 2.0e-169 599.7 493 62.3
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea HOM05D006173 ORTHO05D007685 8.3e-168 594.3 497 60.8
Oeu060754.2 Olea europaea HOM05D006173 ORTHO05D007685 1.4e-167 593.6 526 58.2
FvH4_7g04320 Fragaria vesca HOM05D006173 ORTHO05D007685 3.2e-167 592.4 495 61.2
TPR.G27968 Trifolium pratense HOM05D006173 ORTHO05D007685 3.2e-167 592.4 459 63.2
Migut.K00169 Erythranthe guttata HOM05D006173 ORTHO05D007685 4.0e-162 575.5 494 59.3
MSTRG.10773 Avicennia marina HOM05D006173 ORTHO05D007685 4.4e-161 572.0 493 58.6
PGSC0003DMG400017881 Solanum tuberosum HOM05D006173 ORTHO05D007685 1.7e-160 570.1 497 58.6
Os12g0129400 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 4.9e-160 568.5 496 56.2
Os11g0132700 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 6.4e-160 568.2 496 56.0
Sopen08g011280 Solanum pennellii HOM05D006173 ORTHO05D007685 4.1e-159 565.5 497 58.1
Solyc08g016801.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 7.1e-159 564.7 497 57.9
ECA247G0085 Erigeron canadensis HOM05D006173 ORTHO05D007685 2.1e-158 563.1 496 58.7
FAN06G1001 Fragaria x ananassa HOM05D006173 ORTHO05D007685 7.8e-158 561.2 498 60.0
Zm00001eb405260 Zea mays HOM05D006173 ORTHO05D007685 5.1e-157 558.5 495 56.0
Peaxi162Scf00937g00117 Petunia axillaris HOM05D006173 ORTHO05D007685 1.9e-156 556.6 479 59.7
AUR62020996 Chenopodium quinoa HOM05D006173 ORTHO05D007685 9.5e-156 554.3 479 59.3
CSS0033436 Camellia sinensis var. sinensis HOM05D006173 ORTHO05D007685 1.3e-152 543.9 479 58.0
TAR623G0939 Trochodendron aralioides HOM05D006173 ORTHO05D007685 4.9e-152 542.0 451 62.5
Lsat_1_v5_gn_9_32341 Lactuca sativa HOM05D006173 ORTHO05D007685 2.1e-150 536.6 496 56.7
HanXRQChr14g0457301 Helianthus annuus HOM05D006173 ORTHO05D007685 2.3e-149 533.1 492 56.1
Hund19061 Selenicereus undatus HOM05D006173 ORTHO05D007685 8.6e-149 531.2 479 56.4
SEGI_22413 Sequoiadendron giganteum HOM05D006173 ORTHO05D007685 8.1e-147 524.6 512 53.5
vmacro07758 Vaccinium macrocarpon HOM05D006173 ORTHO05D007685 1.5e-145 520.4 507 54.6
Sc19g0007880 Simmondsia chinensis HOM05D006173 ORTHO05D007685 1.6e-139 500.4 454 55.9
CDE02G3082 Ceratophyllum demersum HOM05D006173 ORTHO05D007685 8.1e-139 498.0 495 52.9
Aqoxy3G01734 Aquilegia oxysepala HOM05D006173 ORTHO05D007685 8.4e-136 488.0 386 62.2
SalBow1G0987 Salvia bowleyana HOM05D006173 ORTHO05D007685 1.4e-127 460.7 522 50.4
AUR62018437 Chenopodium quinoa HOM05D006173 ORTHO05D007685 6.0e-126 455.3 458 52.8
Psat3g082320 Pisum sativum HOM05D006173 ORTHO05D007685 6.0e-126 455.3 405 58.0
SGA_v2.0_scaffold106G30556 Striga asiatica HOM05D006173 ORTHO05D007685 3.1e-122 443.0 513 48.5
Mapoly0010s0124 Marchantia polymorpha HOM05D006173 ORTHO05D007685 3.4e-121 439.5 527 45.2
MBI19_g25019_MAGBIO Magnolia biondii HOM05D006173 ORTHO05D007685 2.5e-116 423.3 442 53.2
RhsimUnG0020600 Rhododendron simsii HOM05D006173 ORTHO05D007685 7.9e-110 401.7 460 48.7
Pp3c11_18220 Physcomitrium patens HOM05D006173 ORTHO05D007685 6.7e-109 398.7 506 42.3
Ca_08352_v3 Cicer arietinum L. HOM05D006173 ORTHO05D007685 2.2e-107 393.7 348 57.5
GSVIVG01025850001 Vitis vinifera HOM05D006173 ORTHO05D007685 4.1e-106 389.4 225 80.4
VMungo1383G1641 Vigna mungo HOM05D006173 ORTHO05D007685 1.2e-102 377.9 475 47.8
SMO116G0186 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 6.1e-102 375.6 512 40.0
SMO133G0039 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 6.1e-102 375.6 512 40.0
MD14G1101100 Malus domestica HOM05D006173 ORTHO05D007685 1.7e-99 367.5 206 82.5
Lalb_Chr22g0358001 Lupinus albus HOM05D006173 ORTHO05D007685 3.1e-98 363.2 196 82.7
RcHm_v2.0_Chr1g0329271 Rosa chinensis HOM05D006173 ORTHO05D007685 4.1e-98 362.8 196 85.7
QL07p014498 Quercus lobata HOM05D006173 ORTHO05D007685 4.7e-94 349.4 183 85.8
ATR0307G134 Amborella trichopoda HOM05D006173 ORTHO05D007685 1.4e-93 347.8 202 77.2
Nitab4.5_0000211g0120 Nicotiana tabacum HOM05D006173 ORTHO05D007685 3.3e-92 343.2 290 60.0
Solyc08g016808.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 4.5e-89 332.8 386 47.7
Nitab4.5_0003840g0020 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.7e-88 330.9 334 53.0
Lalb_Chr22g0357991 Lupinus albus HOM05D006173 ORTHO05D007685 8.0e-78 295.4 244 59.8
HPP92_002170 Vanilla planifolia HOM05D006173 ORTHO05D007685 9.8e-76 288.5 167 76.0
FAN03G1994 Fragaria x ananassa HOM05D006173 ORTHO05D007685 2.8e-75 287.0 243 58.4
Lj1A24G67 Lonicera japonica HOM05D006173 ORTHO05D007685 6.3e-75 285.8 264 54.9
SMO069G0001 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 5.4e-74 282.7 267 50.6
RcHm_v2.0_Chr1g0329281 Rosa chinensis HOM05D006173 ORTHO05D007685 5.9e-73 279.3 243 56.8
Lj1A24G66 Lonicera japonica HOM05D006173 ORTHO05D007685 2.3e-72 277.3 151 85.4
MD14G1101000 Malus domestica HOM05D006173 ORTHO05D007685 5.0e-72 276.2 250 56.4
unitig_46.g18486 Utricularia gibba HOM05D006173 ORTHO05D007685 3.6e-70 270.0 201 64.2
ATR0307G100 Amborella trichopoda HOM05D006173 ORTHO05D007685 5.0e-64 249.6 244 51.6
CANSAT64G0701 Cannabis sativa HOM05D006173 ORTHO05D007685 5.7e-60 236.1 133 80.5
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 9.2e-58 228.8 226 50.9
QL07p014493 Quercus lobata HOM05D006173 ORTHO05D007685 3.5e-57 226.9 170 62.9
GSVIVG01025851001 Vitis vinifera HOM05D006173 ORTHO05D007685 1.0e-56 225.3 172 63.4
Solyc08g036600.3 Solanum lycopersicum HOM05D006173 ORTHO05D007685 4.3e-55 219.9 222 51.4
DCAR_020632 Daucus carota HOM05D002466 ORTHO05D002668 2.3e-48 197.6 204 48.5
CBR_g54315 Chara braunii HOM05D006173 ORTHO05D007685 3.3e-47 193.7 387 32.8
TAR623G0990 Trochodendron aralioides HOM05D006173 ORTHO05D007685 6.6e-40 169.5 97 81.4
Nitab4.5_0000275g0010 Nicotiana tabacum HOM05D006173 ORTHO05D007685 5.6e-39 166.4 86 84.9
Lj2A730T36 Lonicera japonica HOM05D006173 ORTHO05D007685 6.4e-35 152.9 272 36.4
SGA_v2.0_scaffold106G30559 Striga asiatica HOM05D000268 ORTHO05D000261 3.2e-34 150.6 306 36.3
Nitab4.5_0000211g0140 Nicotiana tabacum HOM05D006173 ORTHO05D007685 1.1e-31 142.1 85 78.8
PRCOL_00002577 Prasinoderma coloniale HOM05D006173 ORTHO05D007685 4.3e-31 140.2 325 29.5
Nitab4.5_0003840g0030 Nicotiana tabacum HOM05D006173 ORTHO05D007685 9.9e-28 129.0 70 81.4
MCO12G281 Micromonas commoda HOM05D006173 ORTHO05D007685 1.5e-23 115.2 476 25.2
Os12g0131300 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 5.6e-15 86.7 103 45.6
Lj2A730T35 Lonicera japonica HOM05D006173 ORTHO05D007685 1.8e-13 81.6 57 70.2
Lsat_1_v5_gn_4_93961 Lactuca sativa HOM05D006173 ORTHO05D007685 3.1e-13 80.9 52 67.3


User provided reference genes

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