Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 2.4e-229 798.5 414 100.0
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 5.0e-150 535.0 424 68.4
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 6.3e-145 518.1 416 66.1
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 3.1e-144 515.8 418 66.3
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 8.0e-140 501.1 417 63.3
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 1.4e-139 500.4 416 64.4
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 5.2e-139 498.4 405 64.9
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 2.6e-138 496.1 418 63.6
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 3.4e-138 495.7 418 63.9
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 3.5e-135 485.7 418 63.9
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 5.0e-134 481.9 418 62.7
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 1.2e-132 477.2 416 61.5
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 1.2e-132 477.2 419 62.8
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 3.6e-132 475.7 417 60.9
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 3.6e-132 475.7 418 63.4
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 1.0e-131 474.2 418 61.2
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.8e-131 473.4 419 62.5
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 4.0e-131 472.2 423 60.5
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 2.0e-130 469.9 417 60.7
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 4.4e-130 468.8 417 60.2
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 9.8e-130 467.6 419 60.6
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 7.0e-128 461.5 416 59.4
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 8.0e-124 448.0 416 57.9
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 2.9e-121 439.5 416 57.0
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 3.7e-121 439.1 414 56.5
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 1.4e-120 437.2 451 55.7
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 1.9e-120 436.8 451 55.4
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 2.4e-120 436.4 422 58.5
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 3.2e-120 436.0 420 55.5
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 1.6e-119 433.7 419 58.2
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 2.0e-119 433.3 409 59.2
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 2.0e-119 433.3 409 56.2
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 2.0e-119 433.3 414 54.8
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 2.7e-119 433.0 419 57.8
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 2.7e-119 433.0 385 60.0
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 6.0e-119 431.8 419 55.8
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 3.0e-118 429.5 421 57.7
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 6.6e-118 428.3 409 58.4
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 3.3e-117 426.0 415 57.1
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 4.3e-117 425.6 483 51.8
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 5.6e-117 425.2 410 57.1
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 1.2e-116 424.1 425 57.2
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 1.2e-116 424.1 416 57.2
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 2.8e-116 422.9 418 57.7
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 6.2e-116 421.8 247 89.9
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 8.1e-116 421.4 412 55.1
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 1.1e-115 421.0 418 57.4
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 1.8e-115 420.2 418 57.2
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 3.1e-115 419.5 418 57.4
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 6.8e-115 418.3 418 57.7
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 8.9e-115 417.9 412 58.3
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 1.2e-114 417.5 422 53.3
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 4.4e-114 415.6 423 53.7
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 7.5e-114 414.8 383 58.0
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 9.8e-114 414.5 332 65.4
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 1.7e-113 413.7 414 55.3
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 6.4e-113 411.8 431 55.7
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 6.4e-113 411.8 431 55.7
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 8.3e-113 411.4 348 61.8
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 9.2e-112 407.9 381 56.2
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 4.6e-111 405.6 380 57.9
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 7.8e-111 404.8 414 54.1
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 3.0e-110 402.9 414 54.1
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 3.0e-110 402.9 410 51.7
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 3.3e-109 399.4 388 55.2
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 8.1e-108 394.8 382 52.1
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 8.1e-108 394.8 409 54.3
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 5.8e-106 388.7 374 54.3
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 1.1e-104 384.4 418 55.0
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 1.2e-95 354.4 381 51.2
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 4.6e-95 352.4 454 46.7
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.1e-91 341.3 296 62.5
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.4e-91 340.9 297 62.3
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 6.9e-91 338.6 428 50.7
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 2.2e-89 333.6 421 49.6
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 2.5e-77 293.5 304 54.3
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 2.6e-74 283.5 339 50.7
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 4.2e-72 276.2 361 40.2
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 1.3e-70 271.2 314 49.4
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 1.3e-68 264.6 417 40.8
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 7.6e-66 255.4 268 52.2
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 2.8e-60 236.9 337 43.9
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 9.4e-56 221.9 423 39.5
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 8.8e-54 215.3 258 50.4
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 1.4e-51 208.0 184 56.0
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 1.5e-50 204.5 399 31.1
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 1.7e-49 201.1 141 70.9
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 1.1e-40 171.8 228 50.9
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 1.7e-36 157.9 322 32.0
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 2.7e-31 140.6 310 29.7
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 5.7e-29 132.9 311 31.2
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 3.7e-28 130.2 110 58.2
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 4.5e-26 123.2 92 59.8
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 3.4e-21 107.1 94 56.4
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 5.4e-19 99.8 87 64.4
VMungo0540G1885 Vigna mungo HOM05D007498 ORTHO05D009384 4.4e-13 80.1 67 58.2
BcaB06g26853 Brassica carinata HOM05D007498 ORTHO05D009384 2.8e-07 60.8 143 36.4


User provided reference genes

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